RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
CMTM4-205ENST00000581487 CENPFP49454 3210 aa5.44□□□□□ -1.54
CMTM4-205ENST00000581487 DNAH14Q0VDD8 3507 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 A0A096LNJ9 63 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 CNFNQ9BYD5 112 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 Q8N3U1 123 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 ODF3Q96PU9 254 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 BDP1A6H8Y1 2624 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 M0R2T5 61 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 PCNX2A6NKB5 2137 aa5.43□□□□□ -1.54
CMTM4-205ENST00000581487 IBA57-AS1B1ANH7 110 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 M0QY20 66 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 KIAA1549LQ6ZVL6 1849 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 ACACBO00763 2458 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 A0A087WYN8 130 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 K7EQG2 157 aa5.42□□□□□ -1.54
CMTM4-205ENST00000581487 ZNF575Q86XF7 245 aa5.41□□□□□ -1.54
CMTM4-205ENST00000581487 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
CMTM4-205ENST00000581487 KPRPQ5T749 579 aaPredicted RBP5.41□□□□□ -1.54
CMTM4-205ENST00000581487 CACNA1AO00555 2505 aa5.41□□□□□ -1.54
CMTM4-205ENST00000581487 CEP192Q8TEP8 1941 aa5.41□□□□□ -1.54
CMTM4-205ENST00000581487 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
CMTM4-205ENST00000581487 POLR2KP53803 58 aaKnown RBP5.4□□□□□ -1.54
CMTM4-205ENST00000581487 CDH23Q9H251 3354 aa5.4□□□□□ -1.54
CMTM4-205ENST00000581487 ABCA1O95477 2261 aa5.4□□□□□ -1.54
CMTM4-205ENST00000581487 Q96NJ1 140 aa5.4□□□□□ -1.54
CMTM4-205ENST00000581487 RBM12B-AS1Q9P1G2 102 aa5.4□□□□□ -1.54
CMTM4-205ENST00000581487 INAFM1C9JVW0 142 aa5.4□□□□□ -1.55
CMTM4-205ENST00000581487 ATG2AQ2TAZ0 1938 aa5.4□□□□□ -1.55
CMTM4-205ENST00000581487 PRM2P04554 102 aa5.4□□□□□ -1.55
CMTM4-205ENST00000581487 CD164Q04900 197 aa5.4□□□□□ -1.55
CMTM4-205ENST00000581487 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.55
CMTM4-205ENST00000581487 LINC00846Q9NV44 126 aa5.4□□□□□ -1.55
CMTM4-205ENST00000581487 LINC00313P59037 77 aa5.39□□□□□ -1.55
CMTM4-205ENST00000581487 NTM-AS1Q6ZSK4 140 aa5.39□□□□□ -1.55
CMTM4-205ENST00000581487 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
CMTM4-205ENST00000581487 PTPRQQ9UMZ3 2332 aa5.39□□□□□ -1.55
CMTM4-205ENST00000581487 C2orf16Q68DN1 1984 aa5.39□□□□□ -1.55
CMTM4-205ENST00000581487 PLXNB1O43157 2135 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 C11orf71Q6IPW1 123 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 Q6ZTI0 123 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 SMCPP49901 116 aaPredicted RBP5.38□□□□□ -1.55
CMTM4-205ENST00000581487 KLLNB2CW77 178 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 TSPEAR-AS2P59090 65 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 COX8CQ7Z4L0 72 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 PROK1P58294 105 aa5.38□□□□□ -1.55
CMTM4-205ENST00000581487 CD164L2Q6UWJ8 174 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 LINC00482Q8N8I6 264 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 PSMG3-AS1Q96PY0 264 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 IGIPA6NJ69 53 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 COL5A1P20908 1838 aaPredicted RBP5.37□□□□□ -1.55
CMTM4-205ENST00000581487 A0A087WSZ3 146 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 PIEZO1Q92508 2521 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 COL6A3P12111 3177 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 MED13Q9UHV7 2174 aa5.37□□□□□ -1.55
CMTM4-205ENST00000581487 LINC01600Q96MT4 127 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 A0A0D9SG42 100 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 C10orf99Q6UWK7 81 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 MED13LQ71F56 2210 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 PCNX3Q9H6A9 2034 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 IGLV5-37A0A075B6J1 123 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 NOTCH3Q9UM47 2321 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 TECTAO75443 2155 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 FAM208BQ5VWN6 2430 aa5.36□□□□□ -1.55
CMTM4-205ENST00000581487 OTOGLQ3ZCN5 2332 aa5.35□□□□□ -1.55
CMTM4-205ENST00000581487 TRBV6-8A0A0A6YYG3 113 aa5.35□□□□□ -1.55
CMTM4-205ENST00000581487 C16orf90A8MZG2 172 aa5.35□□□□□ -1.55
CMTM4-205ENST00000581487 LINC00336Q6ZUF6 198 aa5.35□□□□□ -1.55
CMTM4-205ENST00000581487 ADAMTSL4-AS1Q5T5F5 129 aa5.35□□□□□ -1.55
CMTM4-205ENST00000581487 LELP1Q5T871 98 aa5.35□□□□□ -1.55
CMTM4-205ENST00000581487 MYO18BQ8IUG5 2567 aa5.34□□□□□ -1.55
CMTM4-205ENST00000581487 IGLV6-57P01721 117 aa5.34□□□□□ -1.55
CMTM4-205ENST00000581487 PRO0461Q9UI25 63 aa5.34□□□□□ -1.55
CMTM4-205ENST00000581487 TET2Q6N021 2002 aaPredicted RBP5.34□□□□□ -1.55
CMTM4-205ENST00000581487 TP53AIP1Q9HCN2 124 aa5.34□□□□□ -1.55
CMTM4-205ENST00000581487 FREM1Q5H8C1 2179 aa5.34□□□□□ -1.55
CMTM4-205ENST00000581487 BBC3Q96PG8 261 aaPredicted RBP5.34□□□□□ -1.56
CMTM4-205ENST00000581487 ANKHD1Q8IWZ3 2542 aaKnown RBP5.34□□□□□ -1.56
CMTM4-205ENST00000581487 DEFB114Q30KQ6 69 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 PLCE1Q9P212 2302 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 LY6G6DO95868 133 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 IGLV1-40P01703 118 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 MOBPQ13875 183 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 AGRNO00468 2067 aa5.33□□□□□ -1.56
CMTM4-205ENST00000581487 WIPF1O43516 503 aa5.32□□□□□ -1.56
CMTM4-205ENST00000581487 DOPEY1Q5JWR5 2465 aa5.32□□□□□ -1.56
CMTM4-205ENST00000581487 Q6YL49 198 aa5.32□□□□□ -1.56
CMTM4-205ENST00000581487 TM2D3Q9BRN9 247 aa5.32□□□□□ -1.56
CMTM4-205ENST00000581487 H3BS24 57 aa5.31□□□□□ -1.56
CMTM4-205ENST00000581487 PRR14LQ5THK1 2151 aa5.31□□□□□ -1.56
CMTM4-205ENST00000581487 ZNF580Q9UK33 172 aa5.31□□□□□ -1.56
CMTM4-205ENST00000581487 SMIM29Q86T20 159 aa5.31□□□□□ -1.56
CMTM4-205ENST00000581487 COX6A2Q02221 97 aa5.31□□□□□ -1.56
CMTM4-205ENST00000581487 C9orf92A6NGG3 77 aa5.3□□□□□ -1.56
CMTM4-205ENST00000581487 PRR3P79522 188 aaKnown RBP5.3□□□□□ -1.56
CMTM4-205ENST00000581487 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
CMTM4-205ENST00000581487 CDSNQ15517 529 aa5.3□□□□□ -1.56
CMTM4-205ENST00000581487 SORL1Q92673 2214 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms