RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 H3BQ85 93 aa5.42□□□□□ -1.54
TVP23C-208ENST00000581273 SPRY2O43597 315 aa5.42□□□□□ -1.54
TVP23C-208ENST00000581273 PFN2P35080 140 aa5.42□□□□□ -1.54
TVP23C-208ENST00000581273 SNRPD3P62318 126 aaKnown RBP5.42□□□□□ -1.54
TVP23C-208ENST00000581273 MOB4Q9Y3A3 225 aa5.42□□□□□ -1.54
TVP23C-208ENST00000581273 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
TVP23C-208ENST00000581273 IGHV3-49A0A0A0MS15 119 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 IGHV4-59P01825 116 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 IGF1P05019 195 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 C19orf54Q5BKX5 351 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 Q5XG85 94 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 HRCT1Q6UXD1 115 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 Q6YL49 198 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 LINC01006Q8NI28 216 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 OPRPNQ99935 248 aaPredicted RBP5.41□□□□□ -1.54
TVP23C-208ENST00000581273 Q9H8V8 135 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 X6R8D5 127 aa5.41□□□□□ -1.54
TVP23C-208ENST00000581273 DNAH7Q8WXX0 4024 aa5.4□□□□□ -1.54
TVP23C-208ENST00000581273 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
TVP23C-208ENST00000581273 DSCR8Q96T75 97 aa5.4□□□□□ -1.54
TVP23C-208ENST00000581273 RHPN1-AS1Q9BWJ2 59 aa5.4□□□□□ -1.54
TVP23C-208ENST00000581273 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
TVP23C-208ENST00000581273 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 EPM2AB3EWF7 344 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 CCKP06307 115 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 PROK1P58294 105 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 TMEM86BQ8N661 226 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 UBL5Q9BZL1 73 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 ORMDL1Q9P0S3 153 aa5.39□□□□□ -1.55
TVP23C-208ENST00000581273 IGKV3D-7A0A0C4DH55 119 aa5.38□□□□□ -1.55
TVP23C-208ENST00000581273 PRB3Q04118 309 aaPredicted RBP5.38□□□□□ -1.55
TVP23C-208ENST00000581273 Q6ZSV7 163 aa5.38□□□□□ -1.55
TVP23C-208ENST00000581273 C5orf56Q8N8D9 126 aa5.38□□□□□ -1.55
TVP23C-208ENST00000581273 SIRPDQ9H106 197 aa5.38□□□□□ -1.55
TVP23C-208ENST00000581273 ABCA13Q86UQ4 5058 aa5.38□□□□□ -1.55
TVP23C-208ENST00000581273 PDE6GP18545 87 aa5.37□□□□□ -1.55
TVP23C-208ENST00000581273 CHCHD7Q9BUK0 85 aa5.37□□□□□ -1.55
TVP23C-208ENST00000581273 CDKN2A-AS1Q9UH64 79 aa5.37□□□□□ -1.55
TVP23C-208ENST00000581273 ZNF580Q9UK33 172 aa5.37□□□□□ -1.55
TVP23C-208ENST00000581273 STAB2Q8WWQ8 2551 aa5.37□□□□□ -1.55
TVP23C-208ENST00000581273 LCE6AA0A183 80 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 A0A1W2PRX2 142 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 G3V318 75 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 TMEM256-PLSCR3K7ERE1 68 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 XCL1P47992 114 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 LYPD5Q6UWN5 251 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 LINC01561Q8N1V8 128 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
TVP23C-208ENST00000581273 LINC00467Q9BRT7 94 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 C1orf43Q9BWL3 253 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 LINC00846Q9NV44 126 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 XCL2Q9UBD3 114 aa5.36□□□□□ -1.55
TVP23C-208ENST00000581273 F6UB75 175 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 TRBV12-3P01733 135 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 IGHV3-53P01767 116 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 KPRPQ5T749 579 aaPredicted RBP5.35□□□□□ -1.55
TVP23C-208ENST00000581273 Q8N2B8 174 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 C16orf95Q9H693 158 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 SND1-IT1Q9HBX3 110 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 V9GYY9 64 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
TVP23C-208ENST00000581273 TRBV10-1A0A0K0K1A3 114 aa5.34□□□□□ -1.55
TVP23C-208ENST00000581273 IBA57-AS1B1ANH7 110 aa5.34□□□□□ -1.55
TVP23C-208ENST00000581273 SMIM1B2RUZ4 78 aa5.34□□□□□ -1.55
TVP23C-208ENST00000581273 LY6EQ16553 131 aa5.34□□□□□ -1.55
TVP23C-208ENST00000581273 UNQ9165/PRO28630Q6UXU0 137 aa5.34□□□□□ -1.55
TVP23C-208ENST00000581273 C22orf24Q9Y442 160 aa5.34□□□□□ -1.55
TVP23C-208ENST00000581273 C3orf84H3BNL1 204 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 H3BUX3 64 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 ZNF561-AS1K7EIQ3 104 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 SAA4P35542 130 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 FHL2Q14192 279 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 LINC00242Q5T6M2 205 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 C20orf197Q8N268 126 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 FAM104AQ969W3 186 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 FAM218AQ96MZ4 157 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 LINC00167Q96N53 147 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 Q9HAA7 133 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 STARD9Q9P2P6 4700 aa5.33□□□□□ -1.56
TVP23C-208ENST00000581273 K7EQG2 157 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 RS1O15537 224 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 ERC2-IT1O76042 136 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 OXTP01178 125 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 BLCAPP62952 87 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 RPL36AP83881 106 aaKnown RBP5.32□□□□□ -1.56
TVP23C-208ENST00000581273 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 SMIM11BQ8TCY0 68 aa5.32□□□□□ -1.56
TVP23C-208ENST00000581273 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
TVP23C-208ENST00000581273 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.31□□□□□ -1.56
TVP23C-208ENST00000581273 IGKV2-29A2NJV5 120 aaPredicted RBP5.31□□□□□ -1.56
TVP23C-208ENST00000581273 LECT2O14960 151 aa5.31□□□□□ -1.56
TVP23C-208ENST00000581273 C1orf195Q5TG92 126 aa5.31□□□□□ -1.56
TVP23C-208ENST00000581273 Q8N3U1 123 aa5.31□□□□□ -1.56
TVP23C-208ENST00000581273 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
TVP23C-208ENST00000581273 DEFB104AQ8WTQ1 72 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms