RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 hDV102S1A0JD36 115 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 H0Y8G0 127 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 LECT2O14960 151 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 CXCL5P42830 114 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 KRTDAPP60985 99 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 SPAG11BQ08648 103 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 SFTA2Q6UW10 78 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
CCDC47-203ENST00000580986 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.78□□□□□ -1.32
CCDC47-203ENST00000580986 TMEM223A0PJW6 202 aa6.78□□□□□ -1.32
CCDC47-203ENST00000580986 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
CCDC47-203ENST00000580986 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
CCDC47-203ENST00000580986 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
CCDC47-203ENST00000580986 DNAH11Q96DT5 4516 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 PRSS2P07478 247 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 SPINK8P0C7L1 97 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 HERVK_113P61574 105 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 HIGD2BQ4VC39 106 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 C9orf163Q8N9P6 203 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
CCDC47-203ENST00000580986 IGLV5-52A0A0A0MRZ9 124 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 TRBV30A0A0K0K1B3 111 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 E9PLD3 99 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 NDUFA1O15239 70 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 SLPIP03973 132 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 KRTAP10-2P60368 255 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 SYCNQ0VAF6 134 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 COX7B2Q8TF08 81 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 CARD19Q96LW7 228 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 PMCHL2Q9BQD1 86 aa6.75□□□□□ -1.33
CCDC47-203ENST00000580986 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.74□□□□□ -1.33
CCDC47-203ENST00000580986 CKS1BP61024 79 aa6.74□□□□□ -1.33
CCDC47-203ENST00000580986 PLEKHB2Q96CS7 222 aa6.74□□□□□ -1.33
CCDC47-203ENST00000580986 PKHD1P08F94 4074 aa6.73□□□□□ -1.33
CCDC47-203ENST00000580986 LEPROTO15243 131 aa6.73□□□□□ -1.33
CCDC47-203ENST00000580986 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
CCDC47-203ENST00000580986 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
CCDC47-203ENST00000580986 NMUP48645 174 aa6.72□□□□□ -1.33
CCDC47-203ENST00000580986 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
CCDC47-203ENST00000580986 Q6ZRU5 148 aa6.72□□□□□ -1.33
CCDC47-203ENST00000580986 LINC00526Q96FQ7 95 aa6.72□□□□□ -1.33
CCDC47-203ENST00000580986 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
CCDC47-203ENST00000580986 J3QQQ9 107 aa6.71□□□□□ -1.34
CCDC47-203ENST00000580986 GCSHP23434 173 aa6.71□□□□□ -1.34
CCDC47-203ENST00000580986 HERV-K104P63124 156 aa6.71□□□□□ -1.34
CCDC47-203ENST00000580986 COX17Q14061 63 aa6.7□□□□□ -1.34
CCDC47-203ENST00000580986 C2orf82Q6UX34 121 aa6.7□□□□□ -1.34
CCDC47-203ENST00000580986 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
CCDC47-203ENST00000580986 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
CCDC47-203ENST00000580986 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
CCDC47-203ENST00000580986 LOC107984640A0A0U1RRK4 108 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 SCGB1D1O95968 90 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
CCDC47-203ENST00000580986 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 Q6ZSA8 131 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 STPG4Q8N801 248 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 LINC00474Q9P2X8 69 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 NDUFA12Q9UI09 145 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
CCDC47-203ENST00000580986 MYMXA0A1B0GTQ4 84 aa6.68□□□□□ -1.34
CCDC47-203ENST00000580986 HSBP1L1C9JCN9 74 aa6.68□□□□□ -1.34
CCDC47-203ENST00000580986 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
CCDC47-203ENST00000580986 LGALS3P17931 250 aaKnown RBP6.68□□□□□ -1.34
CCDC47-203ENST00000580986 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
CCDC47-203ENST00000580986 PYY3Q5JQD4 70 aa6.67□□□□□ -1.34
CCDC47-203ENST00000580986 ATOH7Q8N100 152 aa6.67□□□□□ -1.34
CCDC47-203ENST00000580986 IGKV2D-26A0A0A0MRZ7 120 aa6.66□□□□□ -1.34
CCDC47-203ENST00000580986 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
CCDC47-203ENST00000580986 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
CCDC47-203ENST00000580986 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
CCDC47-203ENST00000580986 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC47-203ENST00000580986 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
CCDC47-203ENST00000580986 Q6ZRP5 223 aa6.65□□□□□ -1.34
CCDC47-203ENST00000580986 ERG28Q9UKR5 140 aa6.65□□□□□ -1.34
CCDC47-203ENST00000580986 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
CCDC47-203ENST00000580986 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 A0A096LNI7 61 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 TIMM17BO60830 172 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 C9orf116Q5BN46 136 aaPredicted RBP6.64□□□□□ -1.35
CCDC47-203ENST00000580986 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
CCDC47-203ENST00000580986 ZNF815PA8K554 130 aa6.63□□□□□ -1.35
CCDC47-203ENST00000580986 CDK2AP2O75956 126 aa6.63□□□□□ -1.35
CCDC47-203ENST00000580986 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
CCDC47-203ENST00000580986 MAJINQ3KP22 176 aa6.63□□□□□ -1.35
CCDC47-203ENST00000580986 VAMP8Q9BV40 100 aa6.63□□□□□ -1.35
CCDC47-203ENST00000580986 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
CCDC47-203ENST00000580986 DLEU1O43261 78 aa6.62□□□□□ -1.35
CCDC47-203ENST00000580986 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms