RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 PDZD11Q5EBL8 140 aa11.68□□□□□ -0.54
PPP4R1-215ENST00000580182 PACRGQ96M98 296 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-215ENST00000580182 NDUFA6P56556 154 aa11.67□□□□□ -0.54
PPP4R1-215ENST00000580182 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-215ENST00000580182 Q8IZM0 81 aa11.67□□□□□ -0.54
PPP4R1-215ENST00000580182 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 SMIM1B2RUZ4 78 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 TRGC2P03986 189 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 TLX1NBP0CAT3 122 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 C6orf226Q5I0X4 101 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 HERC1Q15751 4861 aa11.66□□□□□ -0.54
PPP4R1-215ENST00000580182 CKS1BP61024 79 aa11.65□□□□□ -0.54
PPP4R1-215ENST00000580182 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
PPP4R1-215ENST00000580182 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
PPP4R1-215ENST00000580182 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
PPP4R1-215ENST00000580182 FAM168BA1KXE4 195 aa11.63□□□□□ -0.55
PPP4R1-215ENST00000580182 IGLC3P0DOY3 106 aa11.63□□□□□ -0.55
PPP4R1-215ENST00000580182 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-215ENST00000580182 COLCA2A8K830 154 aa11.62□□□□□ -0.55
PPP4R1-215ENST00000580182 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-215ENST00000580182 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
PPP4R1-215ENST00000580182 NDUFC2-KCTD14E9PQ53 114 aa11.61□□□□□ -0.55
PPP4R1-215ENST00000580182 ATP5LO75964 103 aa11.61□□□□□ -0.55
PPP4R1-215ENST00000580182 PHF5AQ7RTV0 110 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-215ENST00000580182 COX7B2Q8TF08 81 aa11.61□□□□□ -0.55
PPP4R1-215ENST00000580182 BAGE3Q86Y29 109 aa11.6□□□□□ -0.55
PPP4R1-215ENST00000580182 F8VRH5 84 aa11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 J3QL48 77 aa11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 SCO1O75880 301 aa11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 ZNF22P17026 224 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 KRTAP7-1Q8IUC3 87 aa11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
PPP4R1-215ENST00000580182 DMBT1Q9UGM3 2413 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-215ENST00000580182 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-215ENST00000580182 C11orf86A6NJI1 115 aa11.57□□□□□ -0.56
PPP4R1-215ENST00000580182 H3BRM9 83 aa11.57□□□□□ -0.56
PPP4R1-215ENST00000580182 LINC00310P59036 64 aa11.57□□□□□ -0.56
PPP4R1-215ENST00000580182 HSBP1O75506 76 aa11.56□□□□□ -0.56
PPP4R1-215ENST00000580182 CXCL5P42830 114 aa11.56□□□□□ -0.56
PPP4R1-215ENST00000580182 IFI27L1Q96BM0 104 aa11.56□□□□□ -0.56
PPP4R1-215ENST00000580182 SERF1AO75920 110 aa11.55□□□□□ -0.56
PPP4R1-215ENST00000580182 CHTOPQ9Y3Y2 248 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-215ENST00000580182 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
PPP4R1-215ENST00000580182 NUPR1O60356 82 aa11.54□□□□□ -0.56
PPP4R1-215ENST00000580182 OXTP01178 125 aa11.54□□□□□ -0.56
PPP4R1-215ENST00000580182 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
PPP4R1-215ENST00000580182 XAGE1AQ9HD64 81 aa11.54□□□□□ -0.56
PPP4R1-215ENST00000580182 PSORS1C2Q9UIG4 136 aa11.53□□□□□ -0.56
PPP4R1-215ENST00000580182 TMEM170BQ5T4T1 132 aa11.52□□□□□ -0.57
PPP4R1-215ENST00000580182 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
PPP4R1-215ENST00000580182 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
PPP4R1-215ENST00000580182 M0QXV9 152 aa11.5□□□□□ -0.57
PPP4R1-215ENST00000580182 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
PPP4R1-215ENST00000580182 H0Y8G0 127 aa11.48□□□□□ -0.57
PPP4R1-215ENST00000580182 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
PPP4R1-215ENST00000580182 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
PPP4R1-215ENST00000580182 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
PPP4R1-215ENST00000580182 FABP4P15090 132 aa11.46□□□□□ -0.57
PPP4R1-215ENST00000580182 SPINK6Q6UWN8 80 aa11.46□□□□□ -0.57
PPP4R1-215ENST00000580182 C22orf24Q9Y442 160 aa11.46□□□□□ -0.57
PPP4R1-215ENST00000580182 PFN2P35080 140 aa11.45□□□□□ -0.58
PPP4R1-215ENST00000580182 UBE2BP63146 152 aa11.45□□□□□ -0.58
PPP4R1-215ENST00000580182 ODF1Q14990 250 aa11.45□□□□□ -0.58
PPP4R1-215ENST00000580182 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-215ENST00000580182 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BKO60814 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BJP06899 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BOP23527 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BBP33778 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BDP58876 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BCP62807 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST2H2BEQ16778 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BHQ93079 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BNQ99877 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 HIST1H2BMQ99879 126 aa11.43□□□□□ -0.58
PPP4R1-215ENST00000580182 TNXBP22105 4242 aa11.42□□□□□ -0.58
PPP4R1-215ENST00000580182 IGLV7-43P04211 117 aa11.41□□□□□ -0.58
PPP4R1-215ENST00000580182 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
PPP4R1-215ENST00000580182 ERG28Q9UKR5 140 aa11.41□□□□□ -0.58
PPP4R1-215ENST00000580182 PMCHL2Q9BQD1 86 aa11.39□□□□□ -0.59
PPP4R1-215ENST00000580182 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
PPP4R1-215ENST00000580182 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
PPP4R1-215ENST00000580182 PLA2G2DQ9UNK4 145 aa11.38□□□□□ -0.59
PPP4R1-215ENST00000580182 LBHQ53QV2 105 aaPredicted RBP11.37□□□□□ -0.59
PPP4R1-215ENST00000580182 SND1-IT1Q9HBX3 110 aa11.37□□□□□ -0.59
PPP4R1-215ENST00000580182 TP73-AS1Q9UF72 201 aa11.37□□□□□ -0.59
PPP4R1-215ENST00000580182 COX17Q14061 63 aa11.36□□□□□ -0.59
PPP4R1-215ENST00000580182 REG3GQ6UW15 175 aa11.36□□□□□ -0.59
PPP4R1-215ENST00000580182 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
PPP4R1-215ENST00000580182 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
PPP4R1-215ENST00000580182 GAGE10A6NGK3 116 aa11.35□□□□□ -0.59
PPP4R1-215ENST00000580182 RPL37AP8A6NKH3 93 aa11.35□□□□□ -0.59
PPP4R1-215ENST00000580182 SFTA2Q6UW10 78 aa11.35□□□□□ -0.59
PPP4R1-215ENST00000580182 IGLV5-37A0A075B6J1 123 aa11.34□□□□□ -0.59
PPP4R1-215ENST00000580182 LINC00158P58513 81 aa11.34□□□□□ -0.59
PPP4R1-215ENST00000580182 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
PPP4R1-215ENST00000580182 DPM2O94777 84 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms