RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158		E9PLD3	99 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	LYRM1	O43325	122 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	SERF2	P84101	59 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	GATD1	Q8NB37	220 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	LINC00167	Q96N53	147 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	PSMG3	Q9BT73	122 aa	Predicted RBP	3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	CCDC32	Q9BV29	185 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	ACTR3C	Q9C0K3	210 aa	Predicted RBP	3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	TNFSF18	Q9UNG2	199 aa		3.19	□□□□□ -1.9
KPNB1-209	ENST00000580158	C7orf77	A4D0Y5	90 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158		F2Z2F3	143 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	UPK1B	O75841	260 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	ATP6V0C	P27449	155 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	AKR1C3	P42330	323 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	KRTAP10-5	P60370	271 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	RPS20	P60866	119 aa	Known RBP	3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	RPS29	P62273	56 aa	Known RBP	3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	TEX261	Q6UWH6	196 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158		Q8N377	158 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	LINC00469	Q8N7U9	141 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	STOML3	Q8TAV4	291 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	PPP1R1C	Q8WVI7	109 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	RPL39L	Q96EH5	51 aa	Known RBP	3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	TCEAL7	Q9BRU2	100 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	GNB1L	Q9BYB4	327 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	NUDT15	Q9NV35	164 aa		3.18	□□□□□ -1.9
KPNB1-209	ENST00000580158	HSBP1L1	C9JCN9	74 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	SIX6	O95475	246 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	MPC2	O95563	127 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	FOXA3	P55318	350 aa	Predicted RBP	3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	H2BFS	P57053	126 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	PRLH	P81277	87 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	RNASE13	Q5GAN3	156 aa	Known RBP	3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	FAM19A1	Q7Z5A9	133 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	PLEKHB2	Q96CS7	222 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	XAGE1A	Q9HD64	81 aa		3.17	□□□□□ -1.9
KPNB1-209	ENST00000580158	NEB	P20929	6669 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	IGLV4-3	A0A075B6K6	122 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	RAB19	A4D1S5	217 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	C9orf92	A6NGG3	77 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	PPP1R2P9	O14990	202 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	IGLC6	P0CF74	106 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	RPL32	P62910	135 aa	Known RBP	3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	SMIM15	Q7Z3B0	74 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	BAGE2	Q86Y30	109 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	CBLN2	Q8IUK8	224 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	OCR1	Q9BZK8	76 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	TMEM242	Q9NWH2	141 aa		3.16	□□□□□ -1.9
KPNB1-209	ENST00000580158	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158		A0A1B0GWB2	263 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	CCDC160	A6NGH7	325 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	INMT-MINDY4	F8WBC2	141 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	IFNA1	P01562	189 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	PET100	P0DJ07	73 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	DEFA1	P59665	94 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	KIAA0087	Q14695	138 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	ZNF726P1	Q15940	193 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	C2orf82	Q6UX34	121 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	NKAPP1	Q8N9T2	125 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	ST20	Q9HBF5	79 aa		3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.15	□□□□□ -1.91
KPNB1-209	ENST00000580158	CTXND1	A0A1B0GTU2	59 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	KRTAP2-3	P0C7H8	128 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	FCER1G	P30273	86 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	CKS1B	P61024	79 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	NOTCH2NL	Q7Z3S9	236 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	LINC01551	Q86U37	167 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	KRTAP2-4	Q9BYR9	128 aa		3.14	□□□□□ -1.91
KPNB1-209	ENST00000580158	IGKV2-28	A0A075B6P5	120 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	TRBV6-5	A0A0K0K1A5	114 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	IGKV2D-28	P01615	120 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	MT2A	P02795	61 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	KRTAP10-10	P60014	251 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	KRTAP5-4	Q6L8H1	288 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158		Q6ZUT4	128 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	SPRR4	Q96PI1	79 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	HIGD2A	Q9BW72	106 aa		3.13	□□□□□ -1.91
KPNB1-209	ENST00000580158	IGLV6-57	P01721	117 aa		3.12	□□□□□ -1.91
KPNB1-209	ENST00000580158	SSBP3-AS1	Q7Z2R9	100 aa		3.12	□□□□□ -1.91
KPNB1-209	ENST00000580158	C9orf62	Q8N4C0	152 aa		3.12	□□□□□ -1.91
KPNB1-209	ENST00000580158	CNFN	Q9BYD5	112 aa		3.12	□□□□□ -1.91
KPNB1-209	ENST00000580158	RNASE7	Q9H1E1	156 aa	Known RBP	3.12	□□□□□ -1.91
KPNB1-209	ENST00000580158	LGALS3	P17931	250 aa	Known RBP	3.11	□□□□□ -1.91
KPNB1-209	ENST00000580158	TMUB2	Q71RG4	321 aa		3.11	□□□□□ -1.91
KPNB1-209	ENST00000580158	LITAF	Q99732	161 aa		3.11	□□□□□ -1.91
KPNB1-209	ENST00000580158	TIMM21	Q9BVV7	248 aa		3.11	□□□□□ -1.91
KPNB1-209	ENST00000580158	TMEM126A	Q9H061	195 aa		3.11	□□□□□ -1.91
KPNB1-209	ENST00000580158	TOMM7	Q9P0U1	55 aa		3.11	□□□□□ -1.91
KPNB1-209	ENST00000580158	TRBV27	A0A0K0K1C4	114 aa		3.1	□□□□□ -1.91
KPNB1-209	ENST00000580158	C20orf202	A1L168	122 aa		3.1	□□□□□ -1.91
KPNB1-209	ENST00000580158	MT1F	P04733	61 aa		3.1	□□□□□ -1.91
KPNB1-209	ENST00000580158	POLR2K	P53803	58 aa	Known RBP	3.1	□□□□□ -1.91
KPNB1-209	ENST00000580158	HBB	P68871	147 aa		3.1	□□□□□ -1.91
KPNB1-209	ENST00000580158	LINC00299	Q6ZSB3	139 aa		3.1	□□□□□ -1.91
KPNB1-209	ENST00000580158	KRTAP9-6	A8MVA2	160 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	PFDN1	O60925	122 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	RPL37	P61927	97 aa	Known RBP	3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158	MOBP	Q13875	183 aa		3.09	□□□□□ -1.91
KPNB1-209	ENST00000580158		Q6ZN92	141 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms