RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 C2orf82Q6UX34 121 aa2.87□□□□□ -1.95
CCDC178-209ENST00000579947 MRAP2Q96G30 205 aa2.87□□□□□ -1.95
CCDC178-209ENST00000579947 TMEM242Q9NWH2 141 aa2.87□□□□□ -1.95
CCDC178-209ENST00000579947 Q6ZVH6 145 aa2.87□□□□□ -1.95
CCDC178-209ENST00000579947 WDR61Q9GZS3 305 aaKnown RBP2.87□□□□□ -1.95
CCDC178-209ENST00000579947 MCUBQ9NWR8 336 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 M0R378 163 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 ATP11AUNQ6ZP68 121 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 VCXQ9H320 206 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 C9orf170A2RU37 121 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 A8MWP4 228 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 TMEM238C9JI98 176 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 KIAA1644Q3SXP7 199 aa2.86□□□□□ -1.95
CCDC178-209ENST00000579947 LSM5Q9Y4Y9 91 aaKnown RBP2.86□□□□□ -1.95
CCDC178-209ENST00000579947 FXYD6-FXYD2A0A087WZ82 144 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 FAM236DA0A1B0GTK5 79 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 I3L3M4 83 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 FAM236CP0DP71 79 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 VCX3AQ9NNX9 186 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CCDC178-209ENST00000579947 PVALBP20472 110 aaPredicted RBP2.85□□□□□ -1.95
CCDC178-209ENST00000579947 DEFA3P59666 94 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 TAL2Q16559 108 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 NKAPP1Q8N9T2 125 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 C11orf52Q96A22 123 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 VCX3BQ9H321 246 aa2.85□□□□□ -1.95
CCDC178-209ENST00000579947 PET100P0DJ07 73 aa2.84□□□□□ -1.95
CCDC178-209ENST00000579947 SMAGPQ0VAQ4 97 aa2.84□□□□□ -1.95
CCDC178-209ENST00000579947 GATD1Q8NB37 220 aa2.84□□□□□ -1.95
CCDC178-209ENST00000579947 MCFD2Q8NI22 146 aa2.84□□□□□ -1.95
CCDC178-209ENST00000579947 PEX7O00628 323 aa2.84□□□□□ -1.96
CCDC178-209ENST00000579947 ARL14EPLP0DKL9 152 aa2.84□□□□□ -1.96
CCDC178-209ENST00000579947 TRGC1P0CF51 173 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 BTCP35070 178 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 SDHAF1A6NFY7 115 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 MT1BP07438 61 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
CCDC178-209ENST00000579947 Q6ZN92 141 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 DEDD2Q8WXF8 326 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 FMC1Q96HJ9 113 aa2.83□□□□□ -1.96
CCDC178-209ENST00000579947 A0A1B0GWB2 263 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 E9PLD3 99 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 LTAP01374 205 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 GCHFRP30047 84 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 NDUFV3P56181 108 aaKnown RBP2.82□□□□□ -1.96
CCDC178-209ENST00000579947 ZNF726P1Q15940 193 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
CCDC178-209ENST00000579947 PYGO1Q9Y3Y4 419 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 A0A1W2PRE2 83 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 C7orf77A4D0Y5 90 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 FAUP35544 74 aaKnown RBP2.82□□□□□ -1.96
CCDC178-209ENST00000579947 Q6ZUT4 128 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 HIST1H2BAQ96A08 127 aa2.82□□□□□ -1.96
CCDC178-209ENST00000579947 SMKR1H3BMG3 65 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 IGLC6P0CF74 106 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 C10orf91Q5T1B1 145 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 TMEM167BQ9NRX6 74 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
CCDC178-209ENST00000579947 TRBV6-5A0A0K0K1A5 114 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 SCO1O75880 301 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 TIMM21Q9BVV7 248 aa2.81□□□□□ -1.96
CCDC178-209ENST00000579947 SMIM1B2RUZ4 78 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 HMGB3O15347 200 aaKnown RBP2.8□□□□□ -1.96
CCDC178-209ENST00000579947 G0S2P27469 103 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 AQP4P55087 323 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 VBP1P61758 197 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 TGIF2-C20orf24A0A0A6YYL0 155 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 RAB4AP20338 218 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 SMCR5Q8TEV8 140 aa2.8□□□□□ -1.96
CCDC178-209ENST00000579947 LSM3P62310 102 aaKnown RBP2.79□□□□□ -1.96
CCDC178-209ENST00000579947 CNPY1Q3B7I2 92 aa2.79□□□□□ -1.96
CCDC178-209ENST00000579947 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
CCDC178-209ENST00000579947 UBE2G1P62253 170 aa2.79□□□□□ -1.96
CCDC178-209ENST00000579947 TIMM17AQ99595 171 aa2.79□□□□□ -1.96
CCDC178-209ENST00000579947 IFNA1P01562 189 aa2.79□□□□□ -1.96
CCDC178-209ENST00000579947 CKS1BP61024 79 aa2.79□□□□□ -1.96
CCDC178-209ENST00000579947 ATP6V1G2O95670 118 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 RAB26Q9ULW5 256 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 A0A0G2JQZ4 141 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 RGS21Q2M5E4 152 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 Q5VV11 94 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 TEX261Q6UWH6 196 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 AKAP14Q86UN6 197 aa2.78□□□□□ -1.96
CCDC178-209ENST00000579947 RNASE7Q9H1E1 156 aaKnown RBP2.78□□□□□ -1.96
CCDC178-209ENST00000579947 COX19Q49B96 90 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 CNBD2Q96M20 576 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 RBM12B-AS1Q9P1G2 102 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 F2Z2F3 143 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 NDUFB6O95139 128 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 CXorf1O96002 111 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 C9orf153Q5TBE3 101 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 Q8IZM0 81 aa2.77□□□□□ -1.97
CCDC178-209ENST00000579947 F8VRH5 84 aa2.76□□□□□ -1.97
CCDC178-209ENST00000579947 IL15RAQ13261 267 aa2.76□□□□□ -1.97
CCDC178-209ENST00000579947 C1orf195Q5TG92 126 aa2.76□□□□□ -1.97
CCDC178-209ENST00000579947 Q5XG85 94 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms