RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 PPDPFQ9H3Y8 114 aa7.63□□□□□ -1.19
CDK5RAP3-213ENST00000579605 TOMM7Q9P0U1 55 aa7.63□□□□□ -1.19
CDK5RAP3-213ENST00000579605 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
CDK5RAP3-213ENST00000579605 CKS1BP61024 79 aa7.62□□□□□ -1.19
CDK5RAP3-213ENST00000579605 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
CDK5RAP3-213ENST00000579605 ZC2HC1BQ5TFG8 222 aa7.62□□□□□ -1.19
CDK5RAP3-213ENST00000579605 C2orf66Q6UXQ4 117 aa7.62□□□□□ -1.19
CDK5RAP3-213ENST00000579605 Q8N8P6 123 aa7.62□□□□□ -1.19
CDK5RAP3-213ENST00000579605 ORMDL2Q53FV1 153 aa7.61□□□□□ -1.19
CDK5RAP3-213ENST00000579605 LINC00469Q8N7U9 141 aa7.61□□□□□ -1.19
CDK5RAP3-213ENST00000579605 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
CDK5RAP3-213ENST00000579605 AMELXQ99217 191 aa7.61□□□□□ -1.19
CDK5RAP3-213ENST00000579605 LBHQ53QV2 105 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-213ENST00000579605 ALKBH7Q9BT30 221 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-213ENST00000579605 C22orf24Q9Y442 160 aa7.6□□□□□ -1.19
CDK5RAP3-213ENST00000579605 NUPR1O60356 82 aa7.59□□□□□ -1.19
CDK5RAP3-213ENST00000579605 NPSP0C0P6 89 aa7.59□□□□□ -1.19
CDK5RAP3-213ENST00000579605 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
CDK5RAP3-213ENST00000579605 Q8IZM0 81 aa7.59□□□□□ -1.19
CDK5RAP3-213ENST00000579605 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
CDK5RAP3-213ENST00000579605 CTDSP1Q9GZU7 261 aa7.59□□□□□ -1.19
CDK5RAP3-213ENST00000579605 A0A1B0GVG6 124 aa7.58□□□□□ -1.2
CDK5RAP3-213ENST00000579605 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
CDK5RAP3-213ENST00000579605 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-213ENST00000579605 SEC11AP67812 179 aa7.58□□□□□ -1.2
CDK5RAP3-213ENST00000579605 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
CDK5RAP3-213ENST00000579605 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
CDK5RAP3-213ENST00000579605 K7EMI3 77 aa7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 MT-ND4LP03901 98 aa7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 HERVK_113P63121 156 aa7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 ANAPC16Q96DE5 110 aa7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-213ENST00000579605 F8VRH5 84 aa7.56□□□□□ -1.2
CDK5RAP3-213ENST00000579605 G0S2P27469 103 aa7.56□□□□□ -1.2
CDK5RAP3-213ENST00000579605 NXT2Q9NPJ8 142 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-213ENST00000579605 CDKN2A-AS1Q9UH64 79 aa7.56□□□□□ -1.2
CDK5RAP3-213ENST00000579605 TP73-AS1Q9UF72 201 aa7.55□□□□□ -1.2
CDK5RAP3-213ENST00000579605 CXCL5P42830 114 aa7.54□□□□□ -1.2
CDK5RAP3-213ENST00000579605 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-213ENST00000579605 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
CDK5RAP3-213ENST00000579605 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
CDK5RAP3-213ENST00000579605 TIMM17AQ99595 171 aa7.54□□□□□ -1.2
CDK5RAP3-213ENST00000579605 BCE1O60756 84 aa7.53□□□□□ -1.2
CDK5RAP3-213ENST00000579605 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-213ENST00000579605 TOMM6Q96B49 74 aa7.52□□□□□ -1.21
CDK5RAP3-213ENST00000579605 LINC00167Q96N53 147 aa7.51□□□□□ -1.21
CDK5RAP3-213ENST00000579605 SCGB3A1Q96QR1 104 aa7.51□□□□□ -1.21
CDK5RAP3-213ENST00000579605 IGKV2D-26A0A0A0MRZ7 120 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 RAB14P61106 215 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 MT1HP80294 61 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 PDZD11Q5EBL8 140 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 ERASQ7Z444 233 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
CDK5RAP3-213ENST00000579605 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
CDK5RAP3-213ENST00000579605 GAGE10A6NGK3 116 aa7.49□□□□□ -1.21
CDK5RAP3-213ENST00000579605 UBE2AP49459 152 aa7.48□□□□□ -1.21
CDK5RAP3-213ENST00000579605 RAB5BP61020 215 aa7.48□□□□□ -1.21
CDK5RAP3-213ENST00000579605 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
CDK5RAP3-213ENST00000579605 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
CDK5RAP3-213ENST00000579605 NKAPP1Q8N9T2 125 aa7.47□□□□□ -1.21
CDK5RAP3-213ENST00000579605 IGLV5-37A0A075B6J1 123 aa7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 LINC01549A6NIU2 74 aa7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 SPINK8P0C7L1 97 aa7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 LORP23490 312 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 FAM229BQ4G0N7 80 aa7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 CST9LQ9H4G1 147 aa7.46□□□□□ -1.22
CDK5RAP3-213ENST00000579605 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
CDK5RAP3-213ENST00000579605 H3BRM9 83 aa7.44□□□□□ -1.22
CDK5RAP3-213ENST00000579605 ATP5LO75964 103 aa7.44□□□□□ -1.22
CDK5RAP3-213ENST00000579605 PMVKQ15126 192 aa7.44□□□□□ -1.22
CDK5RAP3-213ENST00000579605 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-213ENST00000579605 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
CDK5RAP3-213ENST00000579605 TRAV9-1A0A075B6T8 112 aa7.43□□□□□ -1.22
CDK5RAP3-213ENST00000579605 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
CDK5RAP3-213ENST00000579605 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
CDK5RAP3-213ENST00000579605 IGKV2-28A0A075B6P5 120 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 SCO1O75880 301 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 IGKV2D-28P01615 120 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 CTAG1AP78358 180 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 SMCO4Q9NRQ5 59 aa7.42□□□□□ -1.22
CDK5RAP3-213ENST00000579605 LINC01546A6NGU7 62 aa7.41□□□□□ -1.22
CDK5RAP3-213ENST00000579605 S100PP25815 95 aa7.41□□□□□ -1.22
CDK5RAP3-213ENST00000579605 PFN2P35080 140 aa7.41□□□□□ -1.22
CDK5RAP3-213ENST00000579605 GNB1LQ9BYB4 327 aa7.41□□□□□ -1.22
CDK5RAP3-213ENST00000579605 M0R2T5 61 aa7.39□□□□□ -1.23
CDK5RAP3-213ENST00000579605 NDUFA6P56556 154 aa7.39□□□□□ -1.23
CDK5RAP3-213ENST00000579605 CLLU1Q5K131 121 aa7.39□□□□□ -1.23
CDK5RAP3-213ENST00000579605 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
CDK5RAP3-213ENST00000579605 TMEM218A2RU14 115 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 IGLC3P0DOY3 106 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms