RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 PMCHL1Q16048 86 aa15.03■□□□□ -0
LIMD2-207ENST00000579329 IGLV5-45A0A087WSX0 123 aa15.02■□□□□ -0
LIMD2-207ENST00000579329 PDZD11Q5EBL8 140 aa15.02■□□□□ -0
LIMD2-207ENST00000579329 CKS1BP61024 79 aa15.01□□□□□ -0.01
LIMD2-207ENST00000579329 C6orf226Q5I0X4 101 aa15.01□□□□□ -0.01
LIMD2-207ENST00000579329 ATP5LO75964 103 aa15□□□□□ -0.01
LIMD2-207ENST00000579329 CHCHD1Q96BP2 118 aaKnown RBP15□□□□□ -0.01
LIMD2-207ENST00000579329 SMIM1B2RUZ4 78 aa14.99□□□□□ -0.01
LIMD2-207ENST00000579329 NDUFA6P56556 154 aa14.99□□□□□ -0.01
LIMD2-207ENST00000579329 C9orf116Q5BN46 136 aaPredicted RBP14.99□□□□□ -0.01
LIMD2-207ENST00000579329 Q6ZRP5 223 aa14.99□□□□□ -0.01
LIMD2-207ENST00000579329 A0A1W2PNN7 141 aa14.98□□□□□ -0.01
LIMD2-207ENST00000579329 TRGC2P03986 189 aa14.97□□□□□ -0.01
LIMD2-207ENST00000579329 HNRNPA3P51991 378 aaKnown RBP14.97□□□□□ -0.01
LIMD2-207ENST00000579329 H3BRM9 83 aa14.96□□□□□ -0.01
LIMD2-207ENST00000579329 IGLC3P0DOY3 106 aa14.96□□□□□ -0.01
LIMD2-207ENST00000579329 CXCL5P42830 114 aa14.96□□□□□ -0.01
LIMD2-207ENST00000579329 NDUFC2-KCTD14E9PQ53 114 aa14.95□□□□□ -0.02
LIMD2-207ENST00000579329 GAGE2EQ4V326 116 aa14.95□□□□□ -0.02
LIMD2-207ENST00000579329 GAGE2DQ9UEU5 116 aa14.95□□□□□ -0.02
LIMD2-207ENST00000579329 SPINK8P0C7L1 97 aa14.94□□□□□ -0.02
LIMD2-207ENST00000579329 BAGE3Q86Y29 109 aa14.94□□□□□ -0.02
LIMD2-207ENST00000579329 COX7B2Q8TF08 81 aa14.94□□□□□ -0.02
LIMD2-207ENST00000579329 HMCN2Q8NDA2 5059 aa14.93□□□□□ -0.02
LIMD2-207ENST00000579329 KRTAP29-1A8MX34 341 aaPredicted RBP14.93□□□□□ -0.02
LIMD2-207ENST00000579329 F8VRH5 84 aa14.93□□□□□ -0.02
LIMD2-207ENST00000579329 PRR3P79522 188 aaKnown RBP14.93□□□□□ -0.02
LIMD2-207ENST00000579329 UBR4Q5T4S7 5183 aa14.92□□□□□ -0.02
LIMD2-207ENST00000579329 COLCA2A8K830 154 aa14.91□□□□□ -0.02
LIMD2-207ENST00000579329 HSBP1O75506 76 aa14.91□□□□□ -0.02
LIMD2-207ENST00000579329 ZNF22P17026 224 aaPredicted RBP14.9□□□□□ -0.02
LIMD2-207ENST00000579329 PKHD1L1Q86WI1 4243 aa14.89□□□□□ -0.03
LIMD2-207ENST00000579329 LRP1Q07954 4544 aaKnown RBP14.89□□□□□ -0.03
LIMD2-207ENST00000579329 OXTP01178 125 aa14.88□□□□□ -0.03
LIMD2-207ENST00000579329 IFI27L1Q96BM0 104 aa14.88□□□□□ -0.03
LIMD2-207ENST00000579329 FAM168BA1KXE4 195 aa14.87□□□□□ -0.03
LIMD2-207ENST00000579329 PHF5AQ7RTV0 110 aaKnown RBP14.87□□□□□ -0.03
LIMD2-207ENST00000579329 FAM19A5Q7Z5A7 132 aaPredicted RBP14.87□□□□□ -0.03
LIMD2-207ENST00000579329 C11orf86A6NJI1 115 aa14.86□□□□□ -0.03
LIMD2-207ENST00000579329 CHTOPQ9Y3Y2 248 aaKnown RBP14.86□□□□□ -0.03
LIMD2-207ENST00000579329 TRAV12-1A0A0B4J245 112 aa14.85□□□□□ -0.03
LIMD2-207ENST00000579329 IGLV5-39A0A0G2JS06 123 aa14.85□□□□□ -0.03
LIMD2-207ENST00000579329 C9orf129Q5T035 196 aaKnown RBP14.85□□□□□ -0.03
LIMD2-207ENST00000579329 FAM19A2Q8N3H0 131 aa14.85□□□□□ -0.03
LIMD2-207ENST00000579329 SERF1AO75920 110 aa14.84□□□□□ -0.03
LIMD2-207ENST00000579329 FAT3Q8TDW7 4589 aa14.83□□□□□ -0.04
LIMD2-207ENST00000579329 TMEM170BQ5T4T1 132 aa14.83□□□□□ -0.04
LIMD2-207ENST00000579329 LINC00310P59036 64 aa14.82□□□□□ -0.04
LIMD2-207ENST00000579329 M0QXV9 152 aa14.81□□□□□ -0.04
LIMD2-207ENST00000579329 SCO1O75880 301 aa14.81□□□□□ -0.04
LIMD2-207ENST00000579329 KRTAP7-1Q8IUC3 87 aa14.81□□□□□ -0.04
LIMD2-207ENST00000579329 XAGE1AQ9HD64 81 aa14.8□□□□□ -0.04
LIMD2-207ENST00000579329 PSORS1C2Q9UIG4 136 aa14.8□□□□□ -0.04
LIMD2-207ENST00000579329 SERTAD4-AS1Q5TG53 156 aa14.79□□□□□ -0.04
LIMD2-207ENST00000579329 LEPROTL1O95214 131 aa14.78□□□□□ -0.04
LIMD2-207ENST00000579329 SPINK6Q6UWN8 80 aa14.76□□□□□ -0.05
LIMD2-207ENST00000579329 UBE2BP63146 152 aa14.75□□□□□ -0.05
LIMD2-207ENST00000579329 NUPR1O60356 82 aa14.74□□□□□ -0.05
LIMD2-207ENST00000579329 C1orf137Q5JT78 98 aa14.74□□□□□ -0.05
LIMD2-207ENST00000579329 SFTA2Q6UW10 78 aa14.74□□□□□ -0.05
LIMD2-207ENST00000579329 HSPB8Q9UJY1 196 aa14.74□□□□□ -0.05
LIMD2-207ENST00000579329 TMEM223A0PJW6 202 aa14.73□□□□□ -0.05
LIMD2-207ENST00000579329 H0Y8G0 127 aa14.73□□□□□ -0.05
LIMD2-207ENST00000579329 SRSF9Q13242 221 aaKnown RBP eCLIP14.73□□□□□ -0.05
LIMD2-207ENST00000579329 ODF1Q14990 250 aa14.72□□□□□ -0.05
LIMD2-207ENST00000579329 KRTAP11-1Q8IUC1 163 aa14.72□□□□□ -0.05
LIMD2-207ENST00000579329 C22orf24Q9Y442 160 aa14.71□□□□□ -0.05
LIMD2-207ENST00000579329 FABP4P15090 132 aa14.7□□□□□ -0.06
LIMD2-207ENST00000579329 ERG28Q9UKR5 140 aa14.7□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BKO60814 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BJP06899 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BOP23527 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BBP33778 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 PFN2P35080 140 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BDP58876 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BCP62807 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST2H2BEQ16778 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 LBHQ53QV2 105 aaPredicted RBP14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BHQ93079 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BNQ99877 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 HIST1H2BMQ99879 126 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 PLA2G2DQ9UNK4 145 aa14.69□□□□□ -0.06
LIMD2-207ENST00000579329 ZNF625Q96I27 306 aaPredicted RBP14.68□□□□□ -0.06
LIMD2-207ENST00000579329 TP73-AS1Q9UF72 201 aa14.68□□□□□ -0.06
LIMD2-207ENST00000579329 IGLV7-43P04211 117 aa14.67□□□□□ -0.06
LIMD2-207ENST00000579329 COX17Q14061 63 aa14.67□□□□□ -0.06
LIMD2-207ENST00000579329 REG3GQ6UW15 175 aa14.67□□□□□ -0.06
LIMD2-207ENST00000579329 MRPL55Q7Z7F7 128 aaKnown RBP14.65□□□□□ -0.06
LIMD2-207ENST00000579329 MT1HL1P0DM35 61 aa14.64□□□□□ -0.07
LIMD2-207ENST00000579329 PLNP26678 52 aa14.64□□□□□ -0.07
LIMD2-207ENST00000579329 IGLV5-37A0A075B6J1 123 aa14.62□□□□□ -0.07
LIMD2-207ENST00000579329 LINC01600Q96MT4 127 aa14.62□□□□□ -0.07
LIMD2-207ENST00000579329 MAP1LC3CQ9BXW4 147 aa14.62□□□□□ -0.07
LIMD2-207ENST00000579329 SND1-IT1Q9HBX3 110 aa14.62□□□□□ -0.07
LIMD2-207ENST00000579329 DPM2O94777 84 aa14.61□□□□□ -0.07
LIMD2-207ENST00000579329 NKAPP1Q8N9T2 125 aa14.61□□□□□ -0.07
LIMD2-207ENST00000579329 DIRC1Q969H9 104 aa14.59□□□□□ -0.07
LIMD2-207ENST00000579329 PMCHL2Q9BQD1 86 aa14.59□□□□□ -0.07
LIMD2-207ENST00000579329 IGKCP01834 107 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms