RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 LOC389332A0A1B0GUA5 103 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 C9JQL5 133 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 F8VRH5 84 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 KRTAP13-2Q52LG2 175 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 C2orf66Q6UXQ4 117 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 ATP5L2Q7Z4Y8 100 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 FAM19A3Q7Z5A8 133 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 LINC00167Q96N53 147 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 RETNLBQ9BQ08 111 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 CDIP1Q9H305 208 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 MAP1LC3AQ9H492 121 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 ANAPC11Q9NYG5 84 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 LAMTOR2Q9Y2Q5 125 aa4.98□□□□□ -1.61
CASC3-206ENST00000579238 RPL37AP8A6NKH3 93 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 CXCL5P42830 114 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 HERVK_113P63121 156 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 SEC11AP67812 179 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 CTAG1AP78358 180 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 FAM229BQ4G0N7 80 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 KRTAP13-1Q8IUC0 172 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 CDKN2A-AS1Q9UH64 79 aa4.97□□□□□ -1.61
CASC3-206ENST00000579238 IGLV7-46A0A075B6I9 117 aa4.96□□□□□ -1.62
CASC3-206ENST00000579238 IGIPA6NJ69 53 aa4.96□□□□□ -1.62
CASC3-206ENST00000579238 UBE2AP49459 152 aa4.96□□□□□ -1.62
CASC3-206ENST00000579238 PEA15Q15121 130 aa4.96□□□□□ -1.62
CASC3-206ENST00000579238 ORMDL2Q53FV1 153 aa4.96□□□□□ -1.62
CASC3-206ENST00000579238 Q8N8P6 123 aa4.96□□□□□ -1.62
CASC3-206ENST00000579238 GEMIN7Q9H840 131 aaKnown RBP4.96□□□□□ -1.62
CASC3-206ENST00000579238 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
CASC3-206ENST00000579238 GAGE10A6NGK3 116 aa4.95□□□□□ -1.62
CASC3-206ENST00000579238 K7EMI3 77 aa4.95□□□□□ -1.62
CASC3-206ENST00000579238 SRSF3P84103 164 aaKnown RBP4.95□□□□□ -1.62
CASC3-206ENST00000579238 PAPPA-AS1Q5QFB9 102 aa4.95□□□□□ -1.62
CASC3-206ENST00000579238 IGKV2D-26A0A0A0MRZ7 120 aa4.94□□□□□ -1.62
CASC3-206ENST00000579238 SMIM1B2RUZ4 78 aa4.93□□□□□ -1.62
CASC3-206ENST00000579238 G0S2P27469 103 aa4.93□□□□□ -1.62
CASC3-206ENST00000579238 PNRC1Q12796 327 aaPredicted RBP4.93□□□□□ -1.62
CASC3-206ENST00000579238 PDZD11Q5EBL8 140 aa4.93□□□□□ -1.62
CASC3-206ENST00000579238 NKAPP1Q8N9T2 125 aa4.93□□□□□ -1.62
CASC3-206ENST00000579238 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
CASC3-206ENST00000579238 NXT2Q9NPJ8 142 aaKnown RBP4.93□□□□□ -1.62
CASC3-206ENST00000579238 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
CASC3-206ENST00000579238 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
CASC3-206ENST00000579238 PPDPFQ9H3Y8 114 aa4.92□□□□□ -1.62
CASC3-206ENST00000579238 hCG_2014768A0A024R1R8 64 aa4.91□□□□□ -1.62
CASC3-206ENST00000579238 IGKV2-28A0A075B6P5 120 aa4.91□□□□□ -1.62
CASC3-206ENST00000579238 TINCRA0A1B0GVN0 87 aa4.91□□□□□ -1.62
CASC3-206ENST00000579238 IGKV2D-28P01615 120 aa4.91□□□□□ -1.62
CASC3-206ENST00000579238 RAB5BP61020 215 aa4.91□□□□□ -1.62
CASC3-206ENST00000579238 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
CASC3-206ENST00000579238 SCO1O75880 301 aa4.9□□□□□ -1.63
CASC3-206ENST00000579238 PRLHP81277 87 aa4.9□□□□□ -1.63
CASC3-206ENST00000579238 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
CASC3-206ENST00000579238 ERASQ7Z444 233 aa4.9□□□□□ -1.63
CASC3-206ENST00000579238 FAM19A1Q7Z5A9 133 aa4.9□□□□□ -1.63
CASC3-206ENST00000579238 FP248Q71RG6 208 aaPredicted RBP4.89□□□□□ -1.63
CASC3-206ENST00000579238 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
CASC3-206ENST00000579238 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
CASC3-206ENST00000579238 SCGB3A1Q96QR1 104 aa4.89□□□□□ -1.63
CASC3-206ENST00000579238 TMEM126AQ9H061 195 aa4.89□□□□□ -1.63
CASC3-206ENST00000579238 ATP5LO75964 103 aa4.88□□□□□ -1.63
CASC3-206ENST00000579238 MT-ND4LP03901 98 aa4.88□□□□□ -1.63
CASC3-206ENST00000579238 SPINK8P0C7L1 97 aa4.88□□□□□ -1.63
CASC3-206ENST00000579238 VPREB1P12018 145 aa4.88□□□□□ -1.63
CASC3-206ENST00000579238 ANAPC16Q96DE5 110 aa4.88□□□□□ -1.63
CASC3-206ENST00000579238 GNB1LQ9BYB4 327 aa4.88□□□□□ -1.63
CASC3-206ENST00000579238 LINC01549A6NIU2 74 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 M0R378 163 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 ADCYAP1P18509 176 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
CASC3-206ENST00000579238 CBLN2Q8IUK8 224 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 LINC00337Q8N6G1 96 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 MRPL18Q9H0U6 180 aaKnown RBP4.87□□□□□ -1.63
CASC3-206ENST00000579238 CST9LQ9H4G1 147 aa4.87□□□□□ -1.63
CASC3-206ENST00000579238 H3BRM9 83 aa4.86□□□□□ -1.63
CASC3-206ENST00000579238 PFN2P35080 140 aa4.86□□□□□ -1.63
CASC3-206ENST00000579238 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
CASC3-206ENST00000579238 RPL24P83731 157 aaKnown RBP4.86□□□□□ -1.63
CASC3-206ENST00000579238 ASB16-AS1Q495Z4 193 aa4.86□□□□□ -1.63
CASC3-206ENST00000579238 C4orf48Q5BLP8 95 aa4.86□□□□□ -1.63
CASC3-206ENST00000579238 SND1-IT1Q9HBX3 110 aa4.86□□□□□ -1.63
CASC3-206ENST00000579238 PMVKQ15126 192 aa4.85□□□□□ -1.63
CASC3-206ENST00000579238 KIAA1644Q3SXP7 199 aa4.85□□□□□ -1.63
CASC3-206ENST00000579238 KRTAP13-3Q3SY46 172 aa4.85□□□□□ -1.63
CASC3-206ENST00000579238 HIGD2AQ9BW72 106 aa4.85□□□□□ -1.63
CASC3-206ENST00000579238 IGLV5-39A0A0G2JS06 123 aa4.84□□□□□ -1.63
CASC3-206ENST00000579238 A0A1B0GVG6 124 aa4.84□□□□□ -1.63
CASC3-206ENST00000579238 LINC01546A6NGU7 62 aa4.84□□□□□ -1.63
CASC3-206ENST00000579238 COX17Q14061 63 aa4.84□□□□□ -1.63
CASC3-206ENST00000579238 SPRR4Q96PI1 79 aa4.84□□□□□ -1.63
CASC3-206ENST00000579238 ERG28Q9UKR5 140 aa4.84□□□□□ -1.63
CASC3-206ENST00000579238 SEC61BP60468 96 aaKnown RBP4.83□□□□□ -1.64
CASC3-206ENST00000579238 RAB14P61106 215 aa4.83□□□□□ -1.64
CASC3-206ENST00000579238 Q8NDZ9 215 aa4.83□□□□□ -1.64
CASC3-206ENST00000579238 ZNF706Q9Y5V0 76 aaPredicted RBP4.83□□□□□ -1.64
CASC3-206ENST00000579238 IGLC3P0DOY3 106 aa4.82□□□□□ -1.64
CASC3-206ENST00000579238 Q8NBF4 154 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms