RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 IGLV5-39A0A0G2JS06 123 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 A0A0J9YXV3 536 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 TINCRA0A1B0GVN0 87 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 LINC01549A6NIU2 74 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 SMIM1B2RUZ4 78 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 EPM2AB3EWF7 344 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 ZNF22P17026 224 aaPredicted RBP2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 XGP55808 180 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 ODF1Q14990 250 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 SS18Q15532 418 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 LINC01620Q4KN68 170 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 TEX43Q6ZNM6 134 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 SDIM1Q6ZPB5 146 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 C5orf38Q86SI9 138 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 LINC01561Q8N1V8 128 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 C9orf163Q8N9P6 203 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 LINC00526Q96FQ7 95 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 SCGB3A1Q96QR1 104 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 CDKN2A-AS1Q9UH64 79 aa2.42□□□□□ -2.02
SMARCE1-215ENST00000578995 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 TRAV12-1A0A0B4J245 112 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 IGHV1-58A0A0C4DH39 117 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 COX7A2LO14548 114 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 PSCAO43653 123 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 HSBP1O75506 76 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 CDK2AP2O75956 126 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 G0S2P27469 103 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 KRTAP10-4P60372 401 aaPredicted RBP2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 SMAGPQ0VAQ4 97 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 PMVKQ15126 192 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 HIGD2BQ4VC39 106 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 C10orf25Q5T742 122 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 DGAT2L7PQ6IED9 249 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 BAGE3Q86Y29 109 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 KRTAP7-1Q8IUC3 87 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 OR10D4PQ8NGN7 298 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 IFI27L1Q96BM0 104 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 PACRGQ96M98 296 aaPredicted RBP2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 VCX2Q9H322 139 aa2.41□□□□□ -2.02
SMARCE1-215ENST00000578995 IGLV5-52A0A0A0MRZ9 124 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 C16orf90A8MZG2 172 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 F8VRH5 84 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 ATP5LO75964 103 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 GCSHP23434 173 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 KRTAP10-12P60413 245 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 HERVK_113P63121 156 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 C14orf177Q52M58 125 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 PAPPA-AS1Q5QFB9 102 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 Q6ZN92 141 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 Q6ZRU5 148 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 HIST3H2BBQ8N257 126 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 C2orf48Q96LS8 159 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 C2orf88Q9BSF0 95 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 CHAC1Q9BUX1 264 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 MRPL35Q9NZE8 188 aaKnown RBP2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 C6orf48Q9UBA6 75 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 FAT3Q8TDW7 4589 aa2.4□□□□□ -2.03
SMARCE1-215ENST00000578995 A0A096LNI7 61 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 hDV102S1A0JD36 115 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 TMEM223A0PJW6 202 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 C5orf52A6NGY3 159 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 SYS1-DBNDD2H3BUS1 97 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 LEPROTL1O95214 131 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 TLX1NBP0CAT3 122 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 C3orf79P0CE67 100 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 NDUFA6P56556 154 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 TSPEAR-AS2P59090 65 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 HAMPP81172 84 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 SPAG11BQ08648 103 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 LINC01545Q5VT33 79 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 C2orf82Q6UX34 121 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 UNQ6190/PRO20217Q6UXQ8 127 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 SCXQ7RTU7 201 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 Q8IZM0 81 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 ORAOV1Q8WV07 137 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 ZNF625Q96I27 306 aaPredicted RBP2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 HIST1H2BLQ99880 126 aa2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 SRRM2Q9UQ35 2752 aaKnown RBP2.39□□□□□ -2.03
SMARCE1-215ENST00000578995 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 F8WDY8 70 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 SPINK8P0C7L1 97 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 FABP4P15090 132 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 SEC11AP67812 179 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 SYCNQ0VAF6 134 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 CFAP161Q6P656 301 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 Q6ZRP5 223 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 LINC00469Q8N7U9 141 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 CIRBP-AS1Q8TBR5 109 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 CARD19Q96LW7 228 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 PMCHL2Q9BQD1 86 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 CHTOPQ9Y3Y2 248 aaKnown RBP2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
SMARCE1-215ENST00000578995 IGKV2D-26A0A0A0MRZ7 120 aa2.37□□□□□ -2.03
SMARCE1-215ENST00000578995 TRBV30A0A0K0K1B3 111 aa2.37□□□□□ -2.03
SMARCE1-215ENST00000578995 APOMO95445 188 aa2.37□□□□□ -2.03
SMARCE1-215ENST00000578995 MALP21145 153 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms