RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
SRSF1-202ENST00000578430 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
SRSF1-202ENST00000578430 NDUFA1O15239 70 aa8.9□□□□□ -0.98
SRSF1-202ENST00000578430 PSCAO43653 123 aa8.9□□□□□ -0.98
SRSF1-202ENST00000578430 HERV-K104P63124 156 aa8.9□□□□□ -0.98
SRSF1-202ENST00000578430 SPAG11BQ08648 103 aa8.89□□□□□ -0.99
SRSF1-202ENST00000578430 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
SRSF1-202ENST00000578430 C6orf223Q8N319 242 aa8.89□□□□□ -0.99
SRSF1-202ENST00000578430 MAPKAPK5-AS1Q8N8E1 139 aa8.89□□□□□ -0.99
SRSF1-202ENST00000578430 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
SRSF1-202ENST00000578430 ZNF561-AS1K7EIQ3 104 aa8.88□□□□□ -0.99
SRSF1-202ENST00000578430 M0R2N4 97 aa8.88□□□□□ -0.99
SRSF1-202ENST00000578430 CKS1BP61024 79 aa8.88□□□□□ -0.99
SRSF1-202ENST00000578430 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
SRSF1-202ENST00000578430 ZNF625Q96I27 306 aaPredicted RBP8.88□□□□□ -0.99
SRSF1-202ENST00000578430 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
SRSF1-202ENST00000578430 TTTY13Q9BZ97 58 aa8.88□□□□□ -0.99
SRSF1-202ENST00000578430 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
SRSF1-202ENST00000578430 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
SRSF1-202ENST00000578430 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
SRSF1-202ENST00000578430 HIGD1BQ9P298 99 aa8.87□□□□□ -0.99
SRSF1-202ENST00000578430 USP17L23D6RBM5 183 aa8.86□□□□□ -0.99
SRSF1-202ENST00000578430 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
SRSF1-202ENST00000578430 SCGB1D4Q6XE38 83 aa8.86□□□□□ -0.99
SRSF1-202ENST00000578430 NTN5Q8WTR8 489 aaPredicted RBP8.86□□□□□ -0.99
SRSF1-202ENST00000578430 TIMM17BO60830 172 aa8.85□□□□□ -0.99
SRSF1-202ENST00000578430 HNRNPA3P51991 378 aaKnown RBP8.85□□□□□ -0.99
SRSF1-202ENST00000578430 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
SRSF1-202ENST00000578430 DDTP30046 118 aa8.84□□□□□ -0.99
SRSF1-202ENST00000578430 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
SRSF1-202ENST00000578430 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
SRSF1-202ENST00000578430 TMEM238C9JI98 176 aa8.83□□□□□ -1
SRSF1-202ENST00000578430 HIGD2BQ4VC39 106 aa8.83□□□□□ -1
SRSF1-202ENST00000578430 C2orf91Q6ZV80 131 aa8.83□□□□□ -1
SRSF1-202ENST00000578430 CAMK2N2Q96S95 79 aa8.83□□□□□ -1
SRSF1-202ENST00000578430 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
SRSF1-202ENST00000578430 COX17Q14061 63 aa8.82□□□□□ -1
SRSF1-202ENST00000578430 C2orf82Q6UX34 121 aa8.82□□□□□ -1
SRSF1-202ENST00000578430 Q6ZVH6 145 aa8.82□□□□□ -1
SRSF1-202ENST00000578430 SPANXB1Q9NS25 103 aaPredicted RBP8.82□□□□□ -1
SRSF1-202ENST00000578430 FRAS1Q86XX4 4008 aa8.81□□□□□ -1
SRSF1-202ENST00000578430 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
SRSF1-202ENST00000578430 TAL2Q16559 108 aa8.81□□□□□ -1
SRSF1-202ENST00000578430 RNF151Q2KHN1 245 aa8.81□□□□□ -1
SRSF1-202ENST00000578430 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
SRSF1-202ENST00000578430 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
SRSF1-202ENST00000578430 GCSHP23434 173 aa8.8□□□□□ -1
SRSF1-202ENST00000578430 SYCNQ0VAF6 134 aa8.8□□□□□ -1
SRSF1-202ENST00000578430 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
SRSF1-202ENST00000578430 ERG28Q9UKR5 140 aa8.8□□□□□ -1
SRSF1-202ENST00000578430 KMT2AQ03164 3969 aa8.79□□□□□ -1
SRSF1-202ENST00000578430 LECT2O14960 151 aa8.79□□□□□ -1
SRSF1-202ENST00000578430 HSD52Q0P140 79 aa8.79□□□□□ -1
SRSF1-202ENST00000578430 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
SRSF1-202ENST00000578430 SPANXDQ9BXN6 97 aa8.79□□□□□ -1
SRSF1-202ENST00000578430 SPANXCQ9NY87 97 aa8.79□□□□□ -1
SRSF1-202ENST00000578430 DNAH10Q8IVF4 4471 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 PCP4L1A6NKN8 68 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 CNBPP62633 177 aaKnown RBP8.78□□□□□ -1
SRSF1-202ENST00000578430 SRSF9Q13242 221 aaKnown RBP eCLIP8.78□□□□□ -1
SRSF1-202ENST00000578430 WFDC2Q14508 124 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 C10orf25Q5T742 122 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 Q6ZRU5 148 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 COPS9Q8WXC6 57 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 CARD19Q96LW7 228 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 LITAFQ99732 161 aa8.78□□□□□ -1
SRSF1-202ENST00000578430 A0A087WTM6 91 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
SRSF1-202ENST00000578430 SMIM13P0DJ93 91 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 IFITM1P13164 125 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 LINC00158P58513 81 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 PPDPFQ9H3Y8 114 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
SRSF1-202ENST00000578430 EREGO14944 169 aa8.76□□□□□ -1.01
SRSF1-202ENST00000578430 PTTG1IPP53801 180 aa8.76□□□□□ -1.01
SRSF1-202ENST00000578430 CTAG1AP78358 180 aa8.76□□□□□ -1.01
SRSF1-202ENST00000578430 DNAH2Q9P225 4427 aa8.75□□□□□ -1.01
SRSF1-202ENST00000578430 M0R143 59 aa8.75□□□□□ -1.01
SRSF1-202ENST00000578430 PFN2P35080 140 aa8.75□□□□□ -1.01
SRSF1-202ENST00000578430 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
SRSF1-202ENST00000578430 Q8N814 137 aa8.75□□□□□ -1.01
SRSF1-202ENST00000578430 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
SRSF1-202ENST00000578430 SLPIP03973 132 aa8.74□□□□□ -1.01
SRSF1-202ENST00000578430 TLX1NBP0CAT3 122 aa8.74□□□□□ -1.01
SRSF1-202ENST00000578430 CEND1Q8N111 149 aa8.74□□□□□ -1.01
SRSF1-202ENST00000578430 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
SRSF1-202ENST00000578430 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
SRSF1-202ENST00000578430 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
SRSF1-202ENST00000578430 RTL8CO15255 209 aa8.73□□□□□ -1.01
SRSF1-202ENST00000578430 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
SRSF1-202ENST00000578430 RPL24P83731 157 aaKnown RBP8.72□□□□□ -1.01
SRSF1-202ENST00000578430 LINC00308Q8TCZ7 52 aa8.72□□□□□ -1.01
SRSF1-202ENST00000578430 HERC2O95714 4834 aa8.72□□□□□ -1.01
SRSF1-202ENST00000578430 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.01
SRSF1-202ENST00000578430 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
SRSF1-202ENST00000578430 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
SRSF1-202ENST00000578430 A6NJY4 79 aa8.71□□□□□ -1.02
SRSF1-202ENST00000578430 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.02
SRSF1-202ENST00000578430 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms