RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
COPS3-215ENST00000578317 DNAH11Q96DT5 4516 aa5.31□□□□□ -1.56
COPS3-215ENST00000578317 IGKV2D-24A0A075B6R9 120 aa5.31□□□□□ -1.56
COPS3-215ENST00000578317 H3BRM9 83 aa5.31□□□□□ -1.56
COPS3-215ENST00000578317 COX7A2LO14548 114 aa5.31□□□□□ -1.56
COPS3-215ENST00000578317 PYY3Q5JQD4 70 aa5.31□□□□□ -1.56
COPS3-215ENST00000578317 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
COPS3-215ENST00000578317 Q9HAA7 133 aa5.31□□□□□ -1.56
COPS3-215ENST00000578317 M0R2N4 97 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 C6orf223Q8N319 242 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 LINC00469Q8N7U9 141 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 TMEM223A0PJW6 202 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 GAGE2BQ13066 116 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 TMEM170BQ5T4T1 132 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 GAGE2AQ6NT46 116 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 C5orf38Q86SI9 138 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 MAPKAPK5-AS1Q8N8E1 139 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
COPS3-215ENST00000578317 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
COPS3-215ENST00000578317 IGHV3-64A0A075B6Q5 118 aa5.29□□□□□ -1.56
COPS3-215ENST00000578317 A4D1N5 150 aa5.29□□□□□ -1.56
COPS3-215ENST00000578317 APOMO95445 188 aa5.29□□□□□ -1.56
COPS3-215ENST00000578317 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
COPS3-215ENST00000578317 C1orf134Q5TEV5 83 aa5.29□□□□□ -1.56
COPS3-215ENST00000578317 IGHV1-58A0A0C4DH39 117 aa5.28□□□□□ -1.56
COPS3-215ENST00000578317 SMIM1B2RUZ4 78 aa5.28□□□□□ -1.56
COPS3-215ENST00000578317 E9PLD3 99 aa5.28□□□□□ -1.56
COPS3-215ENST00000578317 HERVK_113P61574 105 aa5.28□□□□□ -1.56
COPS3-215ENST00000578317 STPG4Q8N801 248 aa5.28□□□□□ -1.56
COPS3-215ENST00000578317 HSBP1L1C9JCN9 74 aa5.27□□□□□ -1.57
COPS3-215ENST00000578317 SMIM6P0DI80 62 aa5.27□□□□□ -1.57
COPS3-215ENST00000578317 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
COPS3-215ENST00000578317 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
COPS3-215ENST00000578317 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 F8WDY8 70 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 PSCAO43653 123 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 SPINK8P0C7L1 97 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 KIAA0087Q14695 138 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 ATOH7Q8N100 152 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 hDV102S1A0JD36 115 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 LEPROTO15243 131 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 C14orf177Q52M58 125 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 Q8IZM0 81 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 C15orf56Q8N910 161 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
COPS3-215ENST00000578317 MAJINQ3KP22 176 aa5.25□□□□□ -1.57
COPS3-215ENST00000578317 C6orf226Q5I0X4 101 aa5.25□□□□□ -1.57
COPS3-215ENST00000578317 ORAOV1Q8WV07 137 aa5.25□□□□□ -1.57
COPS3-215ENST00000578317 C2orf48Q96LS8 159 aa5.25□□□□□ -1.57
COPS3-215ENST00000578317 VAMP8Q9BV40 100 aa5.25□□□□□ -1.57
COPS3-215ENST00000578317 PKD1P98161 4303 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 J3QQQ9 107 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 RTL8CO15255 209 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 PRSS2P07478 247 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 CXCL5P42830 114 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 S100A12P80511 92 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 COX7B2Q8TF08 81 aa5.24□□□□□ -1.57
COPS3-215ENST00000578317 NTN5Q8WTR8 489 aaPredicted RBP5.24□□□□□ -1.57
COPS3-215ENST00000578317 A0A087WTM6 91 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 IGKV2D-26A0A0A0MRZ7 120 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 NMUP48645 174 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 SPAG11BQ08648 103 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 HECTD4Q9Y4D8 3996 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 DNAH5Q8TE73 4624 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 DLEU1O43261 78 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 WFDC2Q14508 124 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 SPATA45Q537H7 98 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 LINC00518Q8N0U6 118 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 ZNF625Q96I27 306 aaPredicted RBP5.23□□□□□ -1.57
COPS3-215ENST00000578317 TOMM7Q9P0U1 55 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 NDUFA12Q9UI09 145 aa5.23□□□□□ -1.57
COPS3-215ENST00000578317 NDUFA1O15239 70 aa5.22□□□□□ -1.57
COPS3-215ENST00000578317 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
COPS3-215ENST00000578317 TSPEAR-AS2P59090 65 aa5.22□□□□□ -1.57
COPS3-215ENST00000578317 CKS1BP61024 79 aa5.22□□□□□ -1.57
COPS3-215ENST00000578317 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
COPS3-215ENST00000578317 HERV-K104P63124 156 aa5.22□□□□□ -1.57
COPS3-215ENST00000578317 LINC00336Q6ZUF6 198 aa5.22□□□□□ -1.57
COPS3-215ENST00000578317 Q8N814 137 aa5.22□□□□□ -1.57
COPS3-215ENST00000578317 MYMXA0A1B0GTQ4 84 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 LINC00587B1AMM8 73 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 LECT2O14960 151 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 COX8AP10176 69 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 HIGD2BQ4VC39 106 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 Q75L30 129 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 C12orf57Q99622 126 aa5.21□□□□□ -1.58
COPS3-215ENST00000578317 TRBV30A0A0K0K1B3 111 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 SYCNQ0VAF6 134 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 UNQ6190/PRO20217Q6UXQ8 127 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 PCP2Q8IVA1 136 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 BOD1L2Q8IYS8 172 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 LINC00526Q96FQ7 95 aa5.2□□□□□ -1.58
COPS3-215ENST00000578317 DNAH8Q96JB1 4490 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms