RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 C1orf137Q5JT78 98 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 COA6Q5JTJ3 125 aaKnown RBP2.36□□□□□ -2.03
PTPRM-206ENST00000578093 RASL11AQ6T310 242 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 NOTCH2NLQ7Z3S9 236 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 YPEL4Q96NS1 127 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 SPANXA1Q9NS26 97 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 A0A0U1RQV1 116 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 A0A1B0GW15 77 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 A4D1N5 150 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 UMAD1C9J7I0 102 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 H0Y9J4 135 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.35□□□□□ -2.03
PTPRM-206ENST00000578093 MT-ND6P03923 174 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 TRGC1P0CF51 173 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 SMIM17P0DL12 118 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 NTF3P20783 257 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 CKS1BP61024 79 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
PTPRM-206ENST00000578093 VAMP3Q15836 100 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 BATFQ16520 125 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
PTPRM-206ENST00000578093 ADAMTSL4-AS1Q5T5F5 129 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 ISOC2Q96AB3 205 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 RPL39LQ96EH5 51 aaKnown RBP2.35□□□□□ -2.03
PTPRM-206ENST00000578093 PRAC1Q96KF2 57 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 SIGMAR1Q99720 223 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 OPRPNQ99935 248 aaPredicted RBP2.35□□□□□ -2.03
PTPRM-206ENST00000578093 VCX2Q9H322 139 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 NAT8Q9UHE5 227 aa2.35□□□□□ -2.03
PTPRM-206ENST00000578093 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 IGHV1-58A0A0C4DH39 117 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 LOC107984640A0A0U1RRK4 108 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 FAM168BA1KXE4 195 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 PDE6DO43924 150 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 APCSP02743 223 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 TRGC2P03986 189 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 IGLV7-43P04211 117 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 FGF6P10767 208 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 ESDP10768 282 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 SYCNQ0VAF6 134 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 PDZD11Q5EBL8 140 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 CENPWQ5EE01 88 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 RNASEKQ6P5S7 137 aaKnown RBP2.34□□□□□ -2.03
PTPRM-206ENST00000578093 BAGE2Q86Y30 109 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 KRTAP7-1Q8IUC3 87 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 FER1L6-AS1Q8NA97 138 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 GATD1Q8NB37 220 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 NUP35Q8NFH5 326 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 OR5A1Q8NGJ0 315 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 MRAP2Q96G30 205 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 BTF3L4Q96K17 158 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 IMMP2LQ96T52 175 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 VAMP8Q9BV40 100 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 CYTL1Q9NRR1 136 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 TMEM242Q9NWH2 141 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 LINC00474Q9P2X8 69 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 UQCR10Q9UDW1 63 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 PYGO1Q9Y3Y4 419 aa2.34□□□□□ -2.03
PTPRM-206ENST00000578093 TRBV20OR9-2A0A075B6H5 130 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 IGLV7-46A0A075B6I9 117 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 TRBV24-1A0A075B6N3 115 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 A0A087X002 238 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 J3QR89 54 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 TSPAN13O95857 204 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 CTRLP40313 264 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 FOXA3P55318 350 aaPredicted RBP2.33□□□□□ -2.04
PTPRM-206ENST00000578093 HERV-K104P63124 156 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 RPL18AQ02543 176 aaKnown RBP2.33□□□□□ -2.04
PTPRM-206ENST00000578093 C5orf47Q569G3 176 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
PTPRM-206ENST00000578093 ZC2HC1BQ5TFG8 222 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 AMMECR1LQ6DCA0 310 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 LYZL1Q6UWQ5 148 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 TEX43Q6ZNM6 134 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 GTF2H5Q6ZYL4 71 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 DIRC1Q969H9 104 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 EIF5A2Q9GZV4 153 aaKnown RBP2.33□□□□□ -2.04
PTPRM-206ENST00000578093 LAMTOR2Q9Y2Q5 125 aa2.33□□□□□ -2.04
PTPRM-206ENST00000578093 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 BORCS7-ASMTA0A0B4J1R7 106 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 SDHAF1A6NFY7 115 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 APOMO95445 188 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 Q6ZN92 141 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 FAM19A5Q7Z5A7 132 aaPredicted RBP2.32□□□□□ -2.04
PTPRM-206ENST00000578093 FAM213BQ8TBF2 198 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 MBD3L1Q8WWY6 194 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 C11orf52Q96A22 123 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 CAMK2N2Q96S95 79 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 RETNLBQ9BQ08 111 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 RNASE7Q9H1E1 156 aaKnown RBP2.32□□□□□ -2.04
PTPRM-206ENST00000578093 CDC42SE2Q9NRR3 84 aa2.32□□□□□ -2.04
PTPRM-206ENST00000578093 A0A087WZ39 114 aa2.31□□□□□ -2.04
PTPRM-206ENST00000578093 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
PTPRM-206ENST00000578093 C9JQL5 133 aa2.31□□□□□ -2.04
PTPRM-206ENST00000578093 H7C423 109 aa2.31□□□□□ -2.04
PTPRM-206ENST00000578093 NCR2O95944 276 aa2.31□□□□□ -2.04
PTPRM-206ENST00000578093 UBE2D1P51668 147 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms