RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 TOMM7Q9P0U1 55 aa12.71□□□□□ -0.37
RHBDL3-205ENST00000578006 LINC00614P0C842 121 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 RAB5BP61020 215 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 C2orf82Q6UX34 121 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 Q6ZRP5 223 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 YPEL4Q96NS1 127 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 CST9LQ9H4G1 147 aa12.7□□□□□ -0.38
RHBDL3-205ENST00000578006 CKS1BP61024 79 aa12.69□□□□□ -0.38
RHBDL3-205ENST00000578006 C6orf226Q5I0X4 101 aa12.69□□□□□ -0.38
RHBDL3-205ENST00000578006 IGLV5-45A0A087WSX0 123 aa12.68□□□□□ -0.38
RHBDL3-205ENST00000578006 URB1-AS1Q96HZ7 61 aa12.68□□□□□ -0.38
RHBDL3-205ENST00000578006 A0A096LNJ9 63 aa12.67□□□□□ -0.38
RHBDL3-205ENST00000578006 NDUFC2-KCTD14E9PQ53 114 aa12.67□□□□□ -0.38
RHBDL3-205ENST00000578006 HBDP02042 147 aa12.67□□□□□ -0.38
RHBDL3-205ENST00000578006 CXCL5P42830 114 aa12.67□□□□□ -0.38
RHBDL3-205ENST00000578006 GAGE2EQ4V326 116 aa12.66□□□□□ -0.38
RHBDL3-205ENST00000578006 GAGE2DQ9UEU5 116 aa12.66□□□□□ -0.38
RHBDL3-205ENST00000578006 SMIM1B2RUZ4 78 aa12.65□□□□□ -0.38
RHBDL3-205ENST00000578006 PDZD11Q5EBL8 140 aa12.65□□□□□ -0.38
RHBDL3-205ENST00000578006 F8VRH5 84 aa12.63□□□□□ -0.39
RHBDL3-205ENST00000578006 CBLN2Q8IUK8 224 aa12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 H3BRM9 83 aa12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 ATP5LO75964 103 aa12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 PMCHL1Q16048 86 aa12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 PHF5AQ7RTV0 110 aaKnown RBP12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 COX7B2Q8TF08 81 aa12.62□□□□□ -0.39
RHBDL3-205ENST00000578006 FAM168BA1KXE4 195 aa12.61□□□□□ -0.39
RHBDL3-205ENST00000578006 NDUFA6P56556 154 aa12.61□□□□□ -0.39
RHBDL3-205ENST00000578006 SPINK6Q6UWN8 80 aa12.61□□□□□ -0.39
RHBDL3-205ENST00000578006 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
RHBDL3-205ENST00000578006 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
RHBDL3-205ENST00000578006 SPINK8P0C7L1 97 aa12.59□□□□□ -0.39
RHBDL3-205ENST00000578006 PSORS1C2Q9UIG4 136 aa12.59□□□□□ -0.39
RHBDL3-205ENST00000578006 C9orf129Q5T035 196 aaKnown RBP12.58□□□□□ -0.4
RHBDL3-205ENST00000578006 M0QXV9 152 aa12.56□□□□□ -0.4
RHBDL3-205ENST00000578006 SRSF9Q13242 221 aaKnown RBP eCLIP12.56□□□□□ -0.4
RHBDL3-205ENST00000578006 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
RHBDL3-205ENST00000578006 C1orf137Q5JT78 98 aa12.55□□□□□ -0.4
RHBDL3-205ENST00000578006 IGLV5-39A0A0G2JS06 123 aa12.54□□□□□ -0.4
RHBDL3-205ENST00000578006 REG3GQ6UW15 175 aa12.54□□□□□ -0.4
RHBDL3-205ENST00000578006 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
RHBDL3-205ENST00000578006 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
RHBDL3-205ENST00000578006 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
RHBDL3-205ENST00000578006 SERTAD4-AS1Q5TG53 156 aa12.53□□□□□ -0.4
RHBDL3-205ENST00000578006 TRGC2P03986 189 aa12.52□□□□□ -0.41
RHBDL3-205ENST00000578006 UBE2BP63146 152 aa12.52□□□□□ -0.41
RHBDL3-205ENST00000578006 ODF1Q14990 250 aa12.52□□□□□ -0.41
RHBDL3-205ENST00000578006 TNXBP22105 4242 aa12.51□□□□□ -0.41
RHBDL3-205ENST00000578006 HSBP1O75506 76 aa12.51□□□□□ -0.41
RHBDL3-205ENST00000578006 XAGE1AQ9HD64 81 aa12.51□□□□□ -0.41
RHBDL3-205ENST00000578006 TRAV12-1A0A0B4J245 112 aa12.5□□□□□ -0.41
RHBDL3-205ENST00000578006 C11orf86A6NJI1 115 aa12.5□□□□□ -0.41
RHBDL3-205ENST00000578006 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
RHBDL3-205ENST00000578006 LINC01600Q96MT4 127 aa12.5□□□□□ -0.41
RHBDL3-205ENST00000578006 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
RHBDL3-205ENST00000578006 TMEM170BQ5T4T1 132 aa12.48□□□□□ -0.41
RHBDL3-205ENST00000578006 IGLV7-43P04211 117 aa12.47□□□□□ -0.41
RHBDL3-205ENST00000578006 SFTA2Q6UW10 78 aa12.47□□□□□ -0.41
RHBDL3-205ENST00000578006 KRTAP11-1Q8IUC1 163 aa12.47□□□□□ -0.41
RHBDL3-205ENST00000578006 TP73-AS1Q9UF72 201 aa12.47□□□□□ -0.41
RHBDL3-205ENST00000578006 C22orf24Q9Y442 160 aa12.47□□□□□ -0.41
RHBDL3-205ENST00000578006 LBHQ53QV2 105 aaPredicted RBP12.46□□□□□ -0.41
RHBDL3-205ENST00000578006 COLCA2A8K830 154 aa12.44□□□□□ -0.42
RHBDL3-205ENST00000578006 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
RHBDL3-205ENST00000578006 DIRC1Q969H9 104 aa12.44□□□□□ -0.42
RHBDL3-205ENST00000578006 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
RHBDL3-205ENST00000578006 SERF1AO75920 110 aa12.42□□□□□ -0.42
RHBDL3-205ENST00000578006 COX17Q14061 63 aa12.42□□□□□ -0.42
RHBDL3-205ENST00000578006 MRPL55Q7Z7F7 128 aaKnown RBP12.42□□□□□ -0.42
RHBDL3-205ENST00000578006 NUPR1O60356 82 aa12.41□□□□□ -0.42
RHBDL3-205ENST00000578006 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
RHBDL3-205ENST00000578006 TMEM223A0PJW6 202 aa12.4□□□□□ -0.42
RHBDL3-205ENST00000578006 LEPROTL1O95214 131 aa12.4□□□□□ -0.42
RHBDL3-205ENST00000578006 PFN2P35080 140 aa12.4□□□□□ -0.42
RHBDL3-205ENST00000578006 LINC00310P59036 64 aa12.4□□□□□ -0.42
RHBDL3-205ENST00000578006 IGLV5-37A0A075B6J1 123 aa12.39□□□□□ -0.43
RHBDL3-205ENST00000578006 HMCN2Q8NDA2 5059 aa12.39□□□□□ -0.43
RHBDL3-205ENST00000578006 H0Y9J4 135 aa12.38□□□□□ -0.43
RHBDL3-205ENST00000578006 KRTAP10-8P60410 259 aa12.37□□□□□ -0.43
RHBDL3-205ENST00000578006 NKAPP1Q8N9T2 125 aa12.37□□□□□ -0.43
RHBDL3-205ENST00000578006 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
RHBDL3-205ENST00000578006 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
RHBDL3-205ENST00000578006 H0Y8G0 127 aa12.36□□□□□ -0.43
RHBDL3-205ENST00000578006 SCO1O75880 301 aa12.36□□□□□ -0.43
RHBDL3-205ENST00000578006 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
RHBDL3-205ENST00000578006 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
RHBDL3-205ENST00000578006 ZNF861PO60384 105 aa12.33□□□□□ -0.44
RHBDL3-205ENST00000578006 PLNP26678 52 aa12.32□□□□□ -0.44
RHBDL3-205ENST00000578006 RPL24P83731 157 aaKnown RBP12.32□□□□□ -0.44
RHBDL3-205ENST00000578006 GAGE10A6NGK3 116 aa12.31□□□□□ -0.44
RHBDL3-205ENST00000578006 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
RHBDL3-205ENST00000578006 BCE1O60756 84 aa12.31□□□□□ -0.44
RHBDL3-205ENST00000578006 FABP4P15090 132 aa12.31□□□□□ -0.44
RHBDL3-205ENST00000578006 VPREB1P12018 145 aa12.3□□□□□ -0.44
RHBDL3-205ENST00000578006 LINC00158P58513 81 aa12.3□□□□□ -0.44
RHBDL3-205ENST00000578006 RPL28P46779 137 aaKnown RBP12.29□□□□□ -0.44
RHBDL3-205ENST00000578006 HERV-K104P63124 156 aa12.29□□□□□ -0.44
RHBDL3-205ENST00000578006 HIST1H2BKO60814 126 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms