RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 C1orf134Q5TEV5 83 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 NDUFB1O75438 58 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 RPL28P46779 137 aaKnown RBP3.19□□□□□ -1.9
NF1-218ENST00000577967 C19orf73Q9NVV2 129 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 SS18L2Q9UHA2 77 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 LINC00474Q9P2X8 69 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.19□□□□□ -1.94e-6■■■■■ 28.6
NF1-218ENST00000577967 C2orf48Q96LS8 159 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 LINC00588Q9Y4M8 146 aa3.19□□□□□ -1.9
NF1-218ENST00000577967 CCKP06307 115 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 PDE6GP18545 87 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 LINC01556Q5JQF7 62 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 C10orf25Q5T742 122 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 MRPL55Q7Z7F7 128 aaKnown RBP3.18□□□□□ -1.9
NF1-218ENST00000577967 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 C6orf48Q9UBA6 75 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 CUL9Q8IWT3 2517 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 K7EIL1 84 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 BPY2O14599 106 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 HIVEP2P31629 2446 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 IGHV3OR16-9A0A0B4J2B5 98 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 B5MCH6 92 aa3.18□□□□□ -1.9
NF1-218ENST00000577967 NDUFV3P56181 108 aaKnown RBP3.18□□□□□ -1.9
NF1-218ENST00000577967 IGLV5-45A0A087WSX0 123 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 MUC7Q8TAX7 377 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 H3BNG1 76 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 ATOX1O00244 68 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 F8WDY8 70 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.17□□□□□ -1.9
NF1-218ENST00000577967 CR1P17927 2039 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 FAM208BQ5VWN6 2430 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 NDUFC2O95298 119 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 SOSTDC1Q6X4U4 206 aa3.17□□□□□ -1.9
NF1-218ENST00000577967 ZNF706Q9Y5V0 76 aaPredicted RBP3.17□□□□□ -1.9
NF1-218ENST00000577967 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
NF1-218ENST00000577967 C22orf24Q9Y442 160 aa3.16□□□□□ -1.9
NF1-218ENST00000577967 ATRXP46100 2492 aa3.16□□□□□ -1.9
NF1-218ENST00000577967 NCOR2Q9Y618 2525 aa3.16□□□□□ -1.9
NF1-218ENST00000577967 ZNF575Q86XF7 245 aa3.16□□□□□ -1.9
NF1-218ENST00000577967 LINC00575Q6W349 94 aa3.15□□□□□ -1.9
NF1-218ENST00000577967 PRYO14603 147 aa3.15□□□□□ -1.9
NF1-218ENST00000577967 PRLHP81277 87 aa3.15□□□□□ -1.9
NF1-218ENST00000577967 DOPEY2Q9Y3R5 2298 aa3.15□□□□□ -1.9
NF1-218ENST00000577967 BDP1A6H8Y1 2624 aa3.15□□□□□ -1.91
NF1-218ENST00000577967 XGP55808 180 aa3.15□□□□□ -1.91
NF1-218ENST00000577967 SPINK6Q6UWN8 80 aa3.15□□□□□ -1.91
NF1-218ENST00000577967 FAM218AQ96MZ4 157 aa3.15□□□□□ -1.91
NF1-218ENST00000577967 MYO15AQ9UKN7 3530 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 MP68P56378 58 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 LITAFQ99732 161 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 Q9BRP9 147 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 FAM30AQ9NZY2 134 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 CIRBP-AS1Q8TBR5 109 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 PHF5AQ7RTV0 110 aaKnown RBP3.14□□□□□ -1.91
NF1-218ENST00000577967 FAM19A3Q7Z5A8 133 aa3.14□□□□□ -1.91
NF1-218ENST00000577967 VCANP13611 3396 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 NBDYA0A0U1RRE5 68 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 WFDC13Q8IUB5 93 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 LINC00167Q96N53 147 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 IGKV4-1P06312 121 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 ATP5EP2Q5VTU8 51 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 RTL8CO15255 209 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 DEFB116Q30KQ4 102 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 SMCR5Q8TEV8 140 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 LAMA1P25391 3075 aa3.13□□□□□ -1.91
NF1-218ENST00000577967 CHTF8P0CG12 524 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 Q6ZRP5 223 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 SMIM20Q8N5G0 67 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 GVQW2A0A096LPI5 108 aaPredicted RBP3.12□□□□□ -1.91
NF1-218ENST00000577967 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 SMCPP49901 116 aaPredicted RBP3.12□□□□□ -1.91
NF1-218ENST00000577967 KIAA0087Q14695 138 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 Q6JHZ5 121 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 COL6A3P12111 3177 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 HIVEP3Q5T1R4 2406 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 C3orf22Q8N5N4 141 aa3.12□□□□□ -1.91
NF1-218ENST00000577967 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 TM2D3Q9BRN9 247 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 WNK1Q9H4A3 2382 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 A0A087WVE0 104 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 SERTAD4-AS1Q5TG53 156 aa3.11□□□□□ -1.91
NF1-218ENST00000577967 ELOF1P60002 83 aaKnown RBP3.1□□□□□ -1.91
NF1-218ENST00000577967 C15orf56Q8N910 161 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 RETNLBQ9BQ08 111 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 EIF4EBP3O60516 100 aaPredicted RBP3.1□□□□□ -1.91
NF1-218ENST00000577967 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 ST20-AS1Q8NBB2 130 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 WDFY3Q8IZQ1 3526 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 AKAP13Q12802 2813 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 SPTAN1Q13813 2472 aaKnown RBP3.1□□□□□ -1.91
NF1-218ENST00000577967 C16orf90A8MZG2 172 aa3.1□□□□□ -1.91
NF1-218ENST00000577967 MUC4Q99102 2169 aa3.09□□□□□ -1.91
NF1-218ENST00000577967 CELSR3Q9NYQ7 3312 aa3.09□□□□□ -1.91
NF1-218ENST00000577967 CASC10Q5T4H9 136 aa3.09□□□□□ -1.91
NF1-218ENST00000577967 LINC00846Q9NV44 126 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms