RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 LEPROTO15243 131 aa6.73□□□□□ -1.33
CRLF3-202ENST00000577725 KRTAP1-5Q9BYS1 174 aa6.73□□□□□ -1.33
CRLF3-202ENST00000577725 HMCN2Q8NDA2 5059 aa6.73□□□□□ -1.33
CRLF3-202ENST00000577725 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
CRLF3-202ENST00000577725 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
CRLF3-202ENST00000577725 COX8AP10176 69 aa6.72□□□□□ -1.33
CRLF3-202ENST00000577725 FOXI1Q12951 378 aa6.72□□□□□ -1.33
CRLF3-202ENST00000577725 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 J3QQQ9 107 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
CRLF3-202ENST00000577725 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 PLEKHB2Q96CS7 222 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 UQCR10Q9UDW1 63 aa6.71□□□□□ -1.34
CRLF3-202ENST00000577725 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.34
CRLF3-202ENST00000577725 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 A0A087WZ39 114 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 COX7A2LO14548 114 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 DDTP30046 118 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 MIAQ16674 131 aa6.7□□□□□ -1.34
CRLF3-202ENST00000577725 TRAV8-4A0A0B4J246 113 aa6.69□□□□□ -1.34
CRLF3-202ENST00000577725 M0R2N4 97 aa6.69□□□□□ -1.34
CRLF3-202ENST00000577725 BOD1L2Q8IYS8 172 aa6.69□□□□□ -1.34
CRLF3-202ENST00000577725 COX7B2Q8TF08 81 aa6.69□□□□□ -1.34
CRLF3-202ENST00000577725 MYMXA0A1B0GTQ4 84 aa6.68□□□□□ -1.34
CRLF3-202ENST00000577725 HNRNPA3P51991 378 aaKnown RBP6.68□□□□□ -1.34
CRLF3-202ENST00000577725 SERTAD4-AS1Q5TG53 156 aa6.68□□□□□ -1.34
CRLF3-202ENST00000577725 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
CRLF3-202ENST00000577725 C10orf126Q8N4M7 172 aa6.68□□□□□ -1.34
CRLF3-202ENST00000577725 ORAOV1Q8WV07 137 aa6.68□□□□□ -1.34
CRLF3-202ENST00000577725 LINC00526Q96FQ7 95 aa6.68□□□□□ -1.34
CRLF3-202ENST00000577725 NBDYA0A0U1RRE5 68 aa6.67□□□□□ -1.34
CRLF3-202ENST00000577725 DLEU1O43261 78 aa6.67□□□□□ -1.34
CRLF3-202ENST00000577725 NDUFA12Q9UI09 145 aa6.67□□□□□ -1.34
CRLF3-202ENST00000577725 LINC00587B1AMM8 73 aa6.66□□□□□ -1.34
CRLF3-202ENST00000577725 CTAG1AP78358 180 aa6.66□□□□□ -1.34
CRLF3-202ENST00000577725 HIGD2BQ4VC39 106 aa6.66□□□□□ -1.34
CRLF3-202ENST00000577725 LINC01561Q8N1V8 128 aa6.66□□□□□ -1.34
CRLF3-202ENST00000577725 ZNF625Q96I27 306 aaPredicted RBP6.66□□□□□ -1.34
CRLF3-202ENST00000577725 SPAG11BQ08648 103 aa6.65□□□□□ -1.34
CRLF3-202ENST00000577725 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
CRLF3-202ENST00000577725 C15orf56Q8N910 161 aa6.65□□□□□ -1.34
CRLF3-202ENST00000577725 RMI2Q96E14 147 aa6.65□□□□□ -1.34
CRLF3-202ENST00000577725 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 LECT2O14960 151 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 NDUFA1O15239 70 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 APOMO95445 188 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 PRSS2P07478 247 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 TTC32Q5I0X7 151 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
CRLF3-202ENST00000577725 A0A0U1RRA0 63 aa6.63□□□□□ -1.35
CRLF3-202ENST00000577725 WFDC2Q14508 124 aa6.63□□□□□ -1.35
CRLF3-202ENST00000577725 C6orf226Q5I0X4 101 aa6.63□□□□□ -1.35
CRLF3-202ENST00000577725 Q8IZM0 81 aa6.63□□□□□ -1.35
CRLF3-202ENST00000577725 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
CRLF3-202ENST00000577725 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
CRLF3-202ENST00000577725 C10orf25Q5T742 122 aa6.62□□□□□ -1.35
CRLF3-202ENST00000577725 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
CRLF3-202ENST00000577725 K7EP13 123 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 HINT1P49773 126 aaPredicted RBP6.61□□□□□ -1.35
CRLF3-202ENST00000577725 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 Q5VSD8 79 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
CRLF3-202ENST00000577725 GAGE10A6NGK3 116 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 PSCAO43653 123 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 CKS1BP61024 79 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 NPC2P61916 151 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 BATFQ16520 125 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
CRLF3-202ENST00000577725 ADAMTSL4-AS1Q5T5F5 129 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 C1orf134Q5TEV5 83 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 Q6ZR54 194 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 DAND5Q8N907 189 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 HIST1H4GQ99525 98 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 LITAFQ99732 161 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 FAM30AQ9NZY2 134 aa6.6□□□□□ -1.35
CRLF3-202ENST00000577725 M0R143 59 aa6.59□□□□□ -1.35
CRLF3-202ENST00000577725 HSD52Q0P140 79 aa6.59□□□□□ -1.35
CRLF3-202ENST00000577725 Q6ZRN7 208 aaPredicted RBP6.59□□□□□ -1.35
CRLF3-202ENST00000577725 NTN5Q8WTR8 489 aaPredicted RBP6.59□□□□□ -1.35
CRLF3-202ENST00000577725 GVQW2A0A096LPI5 108 aaPredicted RBP6.58□□□□□ -1.36
CRLF3-202ENST00000577725 KRTAP9-6A0A140TA67 174 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 GCSHP23434 173 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 PFN2P35080 140 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 HERV-K104P63124 156 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
CRLF3-202ENST00000577725 Q6ZRU5 148 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 CAMK2N2Q96S95 79 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms