RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 RAB5BP61020 215 aa12.97□□□□□ -0.33
POLR2A-206ENST00000576553 PMVKQ15126 192 aa12.97□□□□□ -0.33
POLR2A-206ENST00000576553 GAGE2EQ4V326 116 aa12.96□□□□□ -0.33
POLR2A-206ENST00000576553 GAGE2DQ9UEU5 116 aa12.96□□□□□ -0.33
POLR2A-206ENST00000576553 NDUFC2-KCTD14E9PQ53 114 aa12.95□□□□□ -0.34
POLR2A-206ENST00000576553 CXCL5P42830 114 aa12.94□□□□□ -0.34
POLR2A-206ENST00000576553 IGLV5-45A0A087WSX0 123 aa12.93□□□□□ -0.34
POLR2A-206ENST00000576553 HBDP02042 147 aa12.93□□□□□ -0.34
POLR2A-206ENST00000576553 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
POLR2A-206ENST00000576553 URB1-AS1Q96HZ7 61 aa12.93□□□□□ -0.34
POLR2A-206ENST00000576553 HERC1Q15751 4861 aa12.92□□□□□ -0.34
POLR2A-206ENST00000576553 PKHD1L1Q86WI1 4243 aa12.92□□□□□ -0.34
POLR2A-206ENST00000576553 YPEL4Q96NS1 127 aa12.92□□□□□ -0.34
POLR2A-206ENST00000576553 A0A096LNJ9 63 aa12.91□□□□□ -0.34
POLR2A-206ENST00000576553 SMIM1B2RUZ4 78 aa12.91□□□□□ -0.34
POLR2A-206ENST00000576553 F8VRH5 84 aa12.91□□□□□ -0.34
POLR2A-206ENST00000576553 PHF5AQ7RTV0 110 aaKnown RBP12.91□□□□□ -0.34
POLR2A-206ENST00000576553 H3BRM9 83 aa12.9□□□□□ -0.34
POLR2A-206ENST00000576553 NDUFA6P56556 154 aa12.9□□□□□ -0.34
POLR2A-206ENST00000576553 SPINK6Q6UWN8 80 aa12.9□□□□□ -0.34
POLR2A-206ENST00000576553 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
POLR2A-206ENST00000576553 FAM19A5Q7Z5A7 132 aaPredicted RBP12.89□□□□□ -0.35
POLR2A-206ENST00000576553 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
POLR2A-206ENST00000576553 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
POLR2A-206ENST00000576553 ATP5LO75964 103 aa12.88□□□□□ -0.35
POLR2A-206ENST00000576553 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
POLR2A-206ENST00000576553 IGLC3P0DOY3 106 aa12.87□□□□□ -0.35
POLR2A-206ENST00000576553 PSORS1C2Q9UIG4 136 aa12.87□□□□□ -0.35
POLR2A-206ENST00000576553 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
POLR2A-206ENST00000576553 CBLN2Q8IUK8 224 aa12.86□□□□□ -0.35
POLR2A-206ENST00000576553 C9orf129Q5T035 196 aaKnown RBP12.85□□□□□ -0.35
POLR2A-206ENST00000576553 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
POLR2A-206ENST00000576553 REG3GQ6UW15 175 aa12.85□□□□□ -0.35
POLR2A-206ENST00000576553 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
POLR2A-206ENST00000576553 M0QXV9 152 aa12.84□□□□□ -0.35
POLR2A-206ENST00000576553 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.35
POLR2A-206ENST00000576553 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
POLR2A-206ENST00000576553 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
POLR2A-206ENST00000576553 SLC7A5P1Q8MH63 180 aa12.83□□□□□ -0.36
POLR2A-206ENST00000576553 BAGE3Q86Y29 109 aa12.82□□□□□ -0.36
POLR2A-206ENST00000576553 MT1HL1P0DM35 61 aa12.81□□□□□ -0.36
POLR2A-206ENST00000576553 UBE2BP63146 152 aa12.81□□□□□ -0.36
POLR2A-206ENST00000576553 KRTAP7-1Q8IUC3 87 aa12.81□□□□□ -0.36
POLR2A-206ENST00000576553 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
POLR2A-206ENST00000576553 LINC01600Q96MT4 127 aa12.8□□□□□ -0.36
POLR2A-206ENST00000576553 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
POLR2A-206ENST00000576553 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
POLR2A-206ENST00000576553 HSBP1O75506 76 aa12.77□□□□□ -0.37
POLR2A-206ENST00000576553 TRGC2P03986 189 aa12.77□□□□□ -0.37
POLR2A-206ENST00000576553 CHTOPQ9Y3Y2 248 aaKnown RBP12.77□□□□□ -0.37
POLR2A-206ENST00000576553 C11orf86A6NJI1 115 aa12.76□□□□□ -0.37
POLR2A-206ENST00000576553 IGLV7-43P04211 117 aa12.76□□□□□ -0.37
POLR2A-206ENST00000576553 ODF1Q14990 250 aa12.76□□□□□ -0.37
POLR2A-206ENST00000576553 LBHQ53QV2 105 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-206ENST00000576553 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
POLR2A-206ENST00000576553 IFI27L1Q96BM0 104 aa12.76□□□□□ -0.37
POLR2A-206ENST00000576553 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
POLR2A-206ENST00000576553 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
POLR2A-206ENST00000576553 TRAV12-1A0A0B4J245 112 aa12.74□□□□□ -0.37
POLR2A-206ENST00000576553 SFTA2Q6UW10 78 aa12.73□□□□□ -0.37
POLR2A-206ENST00000576553 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
POLR2A-206ENST00000576553 TP73-AS1Q9UF72 201 aa12.73□□□□□ -0.37
POLR2A-206ENST00000576553 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.37
POLR2A-206ENST00000576553 PLA2G2DQ9UNK4 145 aa12.71□□□□□ -0.37
POLR2A-206ENST00000576553 MRPL55Q7Z7F7 128 aaKnown RBP12.7□□□□□ -0.38
POLR2A-206ENST00000576553 PFN2P35080 140 aa12.69□□□□□ -0.38
POLR2A-206ENST00000576553 COLCA2A8K830 154 aa12.68□□□□□ -0.38
POLR2A-206ENST00000576553 NUPR1O60356 82 aa12.68□□□□□ -0.38
POLR2A-206ENST00000576553 COX17Q14061 63 aa12.68□□□□□ -0.38
POLR2A-206ENST00000576553 ERG28Q9UKR5 140 aa12.68□□□□□ -0.38
POLR2A-206ENST00000576553 SERF1AO75920 110 aa12.67□□□□□ -0.38
POLR2A-206ENST00000576553 H0Y9J4 135 aa12.66□□□□□ -0.38
POLR2A-206ENST00000576553 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
POLR2A-206ENST00000576553 KRTAP10-8P60410 259 aa12.66□□□□□ -0.38
POLR2A-206ENST00000576553 NKAPP1Q8N9T2 125 aa12.66□□□□□ -0.38
POLR2A-206ENST00000576553 IGLV5-37A0A075B6J1 123 aa12.65□□□□□ -0.38
POLR2A-206ENST00000576553 TMEM223A0PJW6 202 aa12.65□□□□□ -0.38
POLR2A-206ENST00000576553 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
POLR2A-206ENST00000576553 LINC00167Q96N53 147 aa12.63□□□□□ -0.39
POLR2A-206ENST00000576553 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
POLR2A-206ENST00000576553 H0Y8G0 127 aa12.62□□□□□ -0.39
POLR2A-206ENST00000576553 LINC00310P59036 64 aa12.62□□□□□ -0.39
POLR2A-206ENST00000576553 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
POLR2A-206ENST00000576553 ZNF861PO60384 105 aa12.61□□□□□ -0.39
POLR2A-206ENST00000576553 GAGE10A6NGK3 116 aa12.6□□□□□ -0.39
POLR2A-206ENST00000576553 RPL37AP8A6NKH3 93 aa12.6□□□□□ -0.39
POLR2A-206ENST00000576553 BCE1O60756 84 aa12.59□□□□□ -0.39
POLR2A-206ENST00000576553 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
POLR2A-206ENST00000576553 LINC00158P58513 81 aa12.58□□□□□ -0.4
POLR2A-206ENST00000576553 FABP4P15090 132 aa12.57□□□□□ -0.4
POLR2A-206ENST00000576553 PLNP26678 52 aa12.57□□□□□ -0.4
POLR2A-206ENST00000576553 RPL28P46779 137 aaKnown RBP12.57□□□□□ -0.4
POLR2A-206ENST00000576553 TNXBP22105 4242 aa12.56□□□□□ -0.4
POLR2A-206ENST00000576553 HERV-K104P63124 156 aa12.56□□□□□ -0.4
POLR2A-206ENST00000576553 IGLV1-50A0A075B6I6 118 aa12.55□□□□□ -0.4
POLR2A-206ENST00000576553 ATP6V1G1O75348 118 aa12.55□□□□□ -0.4
POLR2A-206ENST00000576553 VPREB1P12018 145 aa12.55□□□□□ -0.4
POLR2A-206ENST00000576553 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
POLR2A-206ENST00000576553 SCO1O75880 301 aa12.54□□□□□ -0.4
POLR2A-206ENST00000576553 PRR26Q8N8Z3 221 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms