RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CSMD2Q7Z408 3487 aa-1.2□□□□□ -2.6
CDC27-216ENST00000574304 ATMQ13315 3056 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 KIAA0556O60303 1618 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 PTPN23Q9H3S7 1636 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 TRBV7-4A0A0J9YYF1 115 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 H3BNG1 76 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 COX8AP10176 69 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 DPH3Q96FX2 82 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 TMEM191AQ9H0A3 160 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 SHANK2Q9UPX8 1470 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 CEP290O15078 2479 aa-1.21□□□□□ -2.6
CDC27-216ENST00000574304 PRUNE2Q8WUY3 3088 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 DNAH17Q9UFH2 4485 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 IFNGP01579 166 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 MT1HP80294 61 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 DR1Q01658 176 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 ANP32BQ92688 251 aaKnown RBP-1.22□□□□□ -2.6
CDC27-216ENST00000574304 PDCD10Q9BUL8 212 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 DYNLRB1Q9NP97 96 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 CRIPTQ9P021 101 aa-1.22□□□□□ -2.6
CDC27-216ENST00000574304 SLIT1O75093 1534 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.23□□□□□ -2.61
CDC27-216ENST00000574304 IGLC7A0M8Q6 106 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 SMIM21Q3B7S5 101 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 C12orf73Q69YU5 71 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 MGST2Q99735 147 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 CSMD1Q96PZ7 3565 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 COL4A6Q14031 1691 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 FRYQ5TBA9 3013 aa-1.23□□□□□ -2.61
CDC27-216ENST00000574304 RAPGEF6Q8TEU7 1601 aa-1.24□□□□□ -2.61
CDC27-216ENST00000574304 H0YGG7 62 aa-1.24□□□□□ -2.61
CDC27-216ENST00000574304 MT1XP80297 61 aa-1.24□□□□□ -2.61
CDC27-216ENST00000574304 LINC01558Q9Y6Z2 57 aa-1.24□□□□□ -2.61
CDC27-216ENST00000574304 C5orf42Q9H799 3197 aa-1.24□□□□□ -2.61
CDC27-216ENST00000574304 FMN2Q9NZ56 1722 aa-1.24□□□□□ -2.61
CDC27-216ENST00000574304 SPTAN1Q13813 2472 aaKnown RBP-1.25□□□□□ -2.61
CDC27-216ENST00000574304 PAPPA2Q9BXP8 1791 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 SFT2D2O95562 160 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 LELP1Q5T871 98 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 C10orf113Q5VZT2 155 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 Q8N8P6 123 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 COPS9Q8WXC6 57 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 TSLPQ969D9 159 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 USMG5Q96IX5 58 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 CCDC167Q9P0B6 97 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 LRBAP50851 2863 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 MAGI1Q96QZ7 1491 aaPredicted RBP-1.25□□□□□ -2.61
CDC27-216ENST00000574304 DNAH8Q96JB1 4490 aa-1.25□□□□□ -2.61
CDC27-216ENST00000574304 HMGN4O00479 90 aa-1.26□□□□□ -2.61
CDC27-216ENST00000574304 FDCSPQ8NFU4 85 aa-1.26□□□□□ -2.61
CDC27-216ENST00000574304 TMEM263Q8WUH6 116 aaKnown RBP-1.26□□□□□ -2.61
CDC27-216ENST00000574304 FAIMQ9NVQ4 179 aa-1.26□□□□□ -2.61
CDC27-216ENST00000574304 TRRAPQ9Y4A5 3859 aa-1.26□□□□□ -2.61
CDC27-216ENST00000574304 RANBP2P49792 3224 aaKnown RBP-1.27□□□□□ -2.61
CDC27-216ENST00000574304 TRBV7-3A0A075B6L6 115 aa-1.27□□□□□ -2.61
CDC27-216ENST00000574304 MGPP08493 103 aa-1.27□□□□□ -2.61
CDC27-216ENST00000574304 MT1MQ8N339 61 aa-1.27□□□□□ -2.61
CDC27-216ENST00000574304 LSM10Q969L4 123 aaKnown RBP-1.27□□□□□ -2.61
CDC27-216ENST00000574304 SPRR4Q96PI1 79 aa-1.27□□□□□ -2.61
CDC27-216ENST00000574304 CFTRP13569 1480 aa-1.27□□□□□ -2.61
CDC27-216ENST00000574304 SETBP1Q9Y6X0 1596 aa-1.27□□□□□ -2.61
CDC27-216ENST00000574304 NKTRP30414 1462 aaKnown RBP-1.28□□□□□ -2.61
CDC27-216ENST00000574304 GRIN2AQ12879 1464 aa-1.28□□□□□ -2.61
CDC27-216ENST00000574304 LOC285095A0A1B0GVY8 99 aa-1.28□□□□□ -2.61
CDC27-216ENST00000574304 UBE2D3P61077 147 aa-1.28□□□□□ -2.61
CDC27-216ENST00000574304 UBE2D2P62837 147 aa-1.28□□□□□ -2.61
CDC27-216ENST00000574304 UBA52P62987 128 aaKnown RBP-1.28□□□□□ -2.61
CDC27-216ENST00000574304 LCN9Q8WX39 176 aa-1.28□□□□□ -2.61
CDC27-216ENST00000574304 LINC01600Q96MT4 127 aa-1.28□□□□□ -2.61
CDC27-216ENST00000574304 CEP152O94986 1710 aa-1.29□□□□□ -2.62
CDC27-216ENST00000574304 MT2AP02795 61 aa-1.29□□□□□ -2.62
CDC27-216ENST00000574304 CRYBG3Q68DQ2 2970 aa-1.29□□□□□ -2.62
CDC27-216ENST00000574304 FREM2Q5SZK8 3169 aa-1.3□□□□□ -2.62
CDC27-216ENST00000574304 C9orf92A6NGG3 77 aa-1.3□□□□□ -2.62
CDC27-216ENST00000574304 H0YAA0 97 aa-1.3□□□□□ -2.62
CDC27-216ENST00000574304 SSSCA1O60232 199 aa-1.3□□□□□ -2.62
CDC27-216ENST00000574304 LINC00846Q9NV44 126 aa-1.3□□□□□ -2.62
CDC27-216ENST00000574304 CICQ96RK0 1608 aaPredicted RBP-1.3□□□□□ -2.62
CDC27-216ENST00000574304 MYOM1P52179 1685 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 LOC100130705A0A1B0GUX0 176 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 IGLC1P0CG04 106 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 ARPC4P59998 168 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 KRTAP19-5Q3LI72 72 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 MRPL54Q6P161 138 aaKnown RBP-1.31□□□□□ -2.62
CDC27-216ENST00000574304 WFDC13Q8IUB5 93 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 SERP1Q9Y6X1 66 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 PSME4Q14997 1843 aa-1.31□□□□□ -2.62
CDC27-216ENST00000574304 MGAQ8IWI9 3026 aa-1.32□□□□□ -2.62
CDC27-216ENST00000574304 CPSF1Q10570 1443 aaKnown RBP-1.32□□□□□ -2.62
CDC27-216ENST00000574304 I3L3M4 83 aa-1.32□□□□□ -2.62
CDC27-216ENST00000574304 FAM167A-AS1Q96KT0 104 aa-1.32□□□□□ -2.62
CDC27-216ENST00000574304 PFDN5Q99471 154 aa-1.32□□□□□ -2.62
CDC27-216ENST00000574304 NXT2Q9NPJ8 142 aaKnown RBP-1.32□□□□□ -2.62
CDC27-216ENST00000574304 BTAF1O14981 1849 aa-1.32□□□□□ -2.62
CDC27-216ENST00000574304 ANKRD50Q9ULJ7 1429 aa-1.32□□□□□ -2.62
CDC27-216ENST00000574304 MIF4GDA9UHW6 222 aaKnown RBP-1.33□□□□□ -2.62
CDC27-216ENST00000574304 MT1GP13640 62 aa-1.33□□□□□ -2.62
CDC27-216ENST00000574304 DEFB1P60022 68 aa-1.33□□□□□ -2.62
CDC27-216ENST00000574304 BTG2P78543 158 aa-1.33□□□□□ -2.62
CDC27-216ENST00000574304 HEPN1Q6WQI6 88 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms