RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 KRTDAPP60985 99 aa7.1□□□□□ -1.27
CHD3-216ENST00000573936 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
CHD3-216ENST00000573936 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 J3QL48 77 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 PRSS2P07478 247 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 ODF1Q14990 250 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 LINC00469Q8N7U9 141 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 CHAC1Q9BUX1 264 aa7.09□□□□□ -1.27
CHD3-216ENST00000573936 NDUFA1O15239 70 aa7.08□□□□□ -1.28
CHD3-216ENST00000573936 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
CHD3-216ENST00000573936 PET117Q6UWS5 81 aa7.08□□□□□ -1.28
CHD3-216ENST00000573936 Q6ZRU5 148 aa7.08□□□□□ -1.28
CHD3-216ENST00000573936 CDKN2A-AS1Q9UH64 79 aa7.08□□□□□ -1.28
CHD3-216ENST00000573936 CHTOPQ9Y3Y2 248 aaKnown RBP7.08□□□□□ -1.28
CHD3-216ENST00000573936 IGLV5-45A0A087WSX0 123 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 F8VRH5 84 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 H3BRM9 83 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 IGLC3P0DOY3 106 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 HAMPP81172 84 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 LINC01545Q5VT33 79 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 PMCHL2Q9BQD1 86 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
CHD3-216ENST00000573936 LINC00474Q9P2X8 69 aa7.07□□□□□ -1.28
CHD3-216ENST00000573936 LOC107984640A0A0U1RRK4 108 aa7.06□□□□□ -1.28
CHD3-216ENST00000573936 SMR3BP02814 79 aaPredicted RBP7.06□□□□□ -1.28
CHD3-216ENST00000573936 CIRBPQ14011 172 aaKnown RBP7.06□□□□□ -1.28
CHD3-216ENST00000573936 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
CHD3-216ENST00000573936 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
CHD3-216ENST00000573936 Q8IZM0 81 aa7.06□□□□□ -1.28
CHD3-216ENST00000573936 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
CHD3-216ENST00000573936 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
CHD3-216ENST00000573936 CXCL5P42830 114 aa7.05□□□□□ -1.28
CHD3-216ENST00000573936 CKS1BP61024 79 aa7.05□□□□□ -1.28
CHD3-216ENST00000573936 SCXQ7RTU7 201 aa7.05□□□□□ -1.28
CHD3-216ENST00000573936 CIRBP-AS1Q8TBR5 109 aa7.05□□□□□ -1.28
CHD3-216ENST00000573936 TOMM7Q9P0U1 55 aa7.05□□□□□ -1.28
CHD3-216ENST00000573936 TRBV30A0A0K0K1B3 111 aa7.04□□□□□ -1.28
CHD3-216ENST00000573936 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
CHD3-216ENST00000573936 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
CHD3-216ENST00000573936 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
CHD3-216ENST00000573936 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
CHD3-216ENST00000573936 C20orf202A1L168 122 aa7.03□□□□□ -1.28
CHD3-216ENST00000573936 DPM2O94777 84 aa7.03□□□□□ -1.28
CHD3-216ENST00000573936 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
CHD3-216ENST00000573936 PLNP26678 52 aa7.03□□□□□ -1.28
CHD3-216ENST00000573936 MAJINQ3KP22 176 aa7.03□□□□□ -1.28
CHD3-216ENST00000573936 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
CHD3-216ENST00000573936 A0A096LNI7 61 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 LOC105371267A0A1B0GV96 52 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 PANO1I0J062 215 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 IGKCP01834 107 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 SPINK8P0C7L1 97 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 TLX1NBP0CAT3 122 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 CHTF8P0CG12 524 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 TMEM170BQ5T4T1 132 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
CHD3-216ENST00000573936 A0A087WYN8 130 aa7.01□□□□□ -1.29
CHD3-216ENST00000573936 SCGB1D1O95968 90 aa7.01□□□□□ -1.29
CHD3-216ENST00000573936 RPL18AQ02543 176 aaKnown RBP7.01□□□□□ -1.29
CHD3-216ENST00000573936 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
CHD3-216ENST00000573936 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
CHD3-216ENST00000573936 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
CHD3-216ENST00000573936 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
CHD3-216ENST00000573936 AKR1D1P51857 326 aa7□□□□□ -1.29
CHD3-216ENST00000573936 JOSD1Q15040 202 aaPredicted RBP7□□□□□ -1.29
CHD3-216ENST00000573936 ATOH7Q8N100 152 aa7□□□□□ -1.29
CHD3-216ENST00000573936 STPG4Q8N801 248 aa7□□□□□ -1.29
CHD3-216ENST00000573936 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
CHD3-216ENST00000573936 TMEM223A0PJW6 202 aa6.99□□□□□ -1.29
CHD3-216ENST00000573936 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
CHD3-216ENST00000573936 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
CHD3-216ENST00000573936 PYY3Q5JQD4 70 aa6.98□□□□□ -1.29
CHD3-216ENST00000573936 SFTA2Q6UW10 78 aa6.98□□□□□ -1.29
CHD3-216ENST00000573936 Q6ZRP5 223 aa6.98□□□□□ -1.29
CHD3-216ENST00000573936 SERTAD4-AS1Q5TG53 156 aa6.97□□□□□ -1.29
CHD3-216ENST00000573936 C7orf33Q8WU49 177 aa6.97□□□□□ -1.29
CHD3-216ENST00000573936 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
CHD3-216ENST00000573936 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
CHD3-216ENST00000573936 C9orf116Q5BN46 136 aaPredicted RBP6.96□□□□□ -1.3
CHD3-216ENST00000573936 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
CHD3-216ENST00000573936 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
CHD3-216ENST00000573936 HERVK_113P61574 105 aa6.95□□□□□ -1.3
CHD3-216ENST00000573936 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
CHD3-216ENST00000573936 E9PLD3 99 aa6.94□□□□□ -1.3
CHD3-216ENST00000573936 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
CHD3-216ENST00000573936 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
CHD3-216ENST00000573936 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
CHD3-216ENST00000573936 IGKV2D-26A0A0A0MRZ7 120 aa6.93□□□□□ -1.3
CHD3-216ENST00000573936 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
CHD3-216ENST00000573936 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
CHD3-216ENST00000573936 LEPROTO15243 131 aa6.93□□□□□ -1.3
CHD3-216ENST00000573936 COX17Q14061 63 aa6.93□□□□□ -1.3
CHD3-216ENST00000573936 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
CHD3-216ENST00000573936 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
CHD3-216ENST00000573936 HSBP1L1C9JCN9 74 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms