RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 SPAG11BQ08648 103 aa8.83□□□□□ -1
TVP23A-208ENST00000573857 PDZD11Q5EBL8 140 aa8.83□□□□□ -1
TVP23A-208ENST00000573857 A0A096LNJ9 63 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 IGHV3OR16-9A0A0B4J2B5 98 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BKO60814 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BJP06899 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BOP23527 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BBP33778 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BDP58876 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BCP62807 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST2H2BEQ16778 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.82□□□□□ -1
TVP23A-208ENST00000573857 LINC00242Q5T6M2 205 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 LINC01561Q8N1V8 128 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BHQ93079 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BNQ99877 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 HIST1H2BMQ99879 126 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 CST9LQ9H4G1 147 aa8.82□□□□□ -1
TVP23A-208ENST00000573857 GEMIN7Q9H840 131 aaKnown RBP8.82□□□□□ -1
TVP23A-208ENST00000573857 SERF1AO75920 110 aa8.81□□□□□ -1
TVP23A-208ENST00000573857 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
TVP23A-208ENST00000573857 LINC00173Q6ZV60 143 aa8.81□□□□□ -1
TVP23A-208ENST00000573857 OR10D4PQ8NGN7 298 aa8.81□□□□□ -1
TVP23A-208ENST00000573857 RNF213Q63HN8 5207 aa8.8□□□□□ -1
TVP23A-208ENST00000573857 A0A087WZ39 114 aa8.8□□□□□ -1
TVP23A-208ENST00000573857 F8WDY8 70 aa8.8□□□□□ -1
TVP23A-208ENST00000573857 PMCHL1Q16048 86 aa8.8□□□□□ -1
TVP23A-208ENST00000573857 RNF151Q2KHN1 245 aa8.8□□□□□ -1
TVP23A-208ENST00000573857 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
TVP23A-208ENST00000573857 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
TVP23A-208ENST00000573857 LEPROTL1O95214 131 aa8.79□□□□□ -1
TVP23A-208ENST00000573857 ORAOV1Q8WV07 137 aa8.79□□□□□ -1
TVP23A-208ENST00000573857 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
TVP23A-208ENST00000573857 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
TVP23A-208ENST00000573857 NDUFA6P56556 154 aa8.78□□□□□ -1
TVP23A-208ENST00000573857 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
TVP23A-208ENST00000573857 MRPL35Q9NZE8 188 aaKnown RBP8.78□□□□□ -1
TVP23A-208ENST00000573857 TRAV12-1A0A0B4J245 112 aa8.77□□□□□ -1.01
TVP23A-208ENST00000573857 H3BRM9 83 aa8.77□□□□□ -1.01
TVP23A-208ENST00000573857 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
TVP23A-208ENST00000573857 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
TVP23A-208ENST00000573857 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
TVP23A-208ENST00000573857 IGLV5-45A0A087WSX0 123 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 NDUFA1O15239 70 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 LINC00310P59036 64 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 C10orf25Q5T742 122 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 ZC2HC1BQ5TFG8 222 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
TVP23A-208ENST00000573857 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
TVP23A-208ENST00000573857 MAP1LC3CQ9BXW4 147 aa8.74□□□□□ -1.01
TVP23A-208ENST00000573857 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
TVP23A-208ENST00000573857 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
TVP23A-208ENST00000573857 PRSS2P07478 247 aa8.73□□□□□ -1.01
TVP23A-208ENST00000573857 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
TVP23A-208ENST00000573857 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
TVP23A-208ENST00000573857 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
TVP23A-208ENST00000573857 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
TVP23A-208ENST00000573857 F8VRH5 84 aa8.72□□□□□ -1.01
TVP23A-208ENST00000573857 NUPR1O60356 82 aa8.72□□□□□ -1.01
TVP23A-208ENST00000573857 Q8IZM0 81 aa8.72□□□□□ -1.01
TVP23A-208ENST00000573857 IGLV7-43P04211 117 aa8.71□□□□□ -1.02
TVP23A-208ENST00000573857 S100A6P06703 90 aa8.71□□□□□ -1.02
TVP23A-208ENST00000573857 FABP4P15090 132 aa8.71□□□□□ -1.02
TVP23A-208ENST00000573857 CXCL5P42830 114 aa8.71□□□□□ -1.02
TVP23A-208ENST00000573857 KIAA0087Q14695 138 aa8.71□□□□□ -1.02
TVP23A-208ENST00000573857 KRTAP11-1Q8IUC1 163 aa8.71□□□□□ -1.02
TVP23A-208ENST00000573857 PLNP26678 52 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 CKS1BP61024 79 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 GAGE2EQ4V326 116 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 FAM19A5Q7Z5A7 132 aaPredicted RBP8.7□□□□□ -1.02
TVP23A-208ENST00000573857 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 GAGE2DQ9UEU5 116 aa8.7□□□□□ -1.02
TVP23A-208ENST00000573857 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
TVP23A-208ENST00000573857 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
TVP23A-208ENST00000573857 AKR1D1P51857 326 aa8.68□□□□□ -1.02
TVP23A-208ENST00000573857 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
TVP23A-208ENST00000573857 SMIM1B2RUZ4 78 aa8.67□□□□□ -1.02
TVP23A-208ENST00000573857 H0Y9J4 135 aa8.67□□□□□ -1.02
TVP23A-208ENST00000573857 LPAP08519 4548 aa8.67□□□□□ -1.02
TVP23A-208ENST00000573857 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
TVP23A-208ENST00000573857 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
TVP23A-208ENST00000573857 C11orf86A6NJI1 115 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 NDUFC2-KCTD14E9PQ53 114 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 H0Y8G0 127 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 M0QXV9 152 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 DPM2O94777 84 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-208ENST00000573857 S100A2P29034 98 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 PET117Q6UWS5 81 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 COX7B2Q8TF08 81 aa8.66□□□□□ -1.02
TVP23A-208ENST00000573857 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
TVP23A-208ENST00000573857 SYS1-DBNDD2H3BUS1 97 aa8.65□□□□□ -1.02
TVP23A-208ENST00000573857 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
TVP23A-208ENST00000573857 UBE2BP63146 152 aa8.64□□□□□ -1.03
TVP23A-208ENST00000573857 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms