RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 IMUPQ9GZP8 106 aa11.55□□□□□ -0.56
CACNA1A-202ENST00000573710 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 NTM-AS1Q6ZSK4 140 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 Q8NA96 180 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 LRRC75A-AS1Q8N1F1 130 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 Q6ZTC4 211 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-202ENST00000573710 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
CACNA1A-202ENST00000573710 Q8N3U1 123 aa11.53□□□□□ -0.56
CACNA1A-202ENST00000573710 MOBPQ13875 183 aa11.52□□□□□ -0.57
CACNA1A-202ENST00000573710 IGFL2Q6UWQ7 119 aa11.52□□□□□ -0.57
CACNA1A-202ENST00000573710 LIMD2Q9BT23 127 aa11.52□□□□□ -0.57
CACNA1A-202ENST00000573710 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 COX17Q14061 63 aa11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 ODF3Q96PU9 254 aa11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 Q8N814 137 aa11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 LINC01554Q52M75 96 aa11.5□□□□□ -0.57
CACNA1A-202ENST00000573710 MRGPRG-AS1Q2M3A8 158 aa11.5□□□□□ -0.57
CACNA1A-202ENST00000573710 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
CACNA1A-202ENST00000573710 MBD6Q96DN6 1003 aa11.49□□□□□ -0.57
CACNA1A-202ENST00000573710 TSHBP01222 138 aa11.49□□□□□ -0.57
CACNA1A-202ENST00000573710 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
CACNA1A-202ENST00000573710 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
CACNA1A-202ENST00000573710 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
CACNA1A-202ENST00000573710 EDN2P20800 178 aa11.46□□□□□ -0.58
CACNA1A-202ENST00000573710 ZFYVE26Q68DK2 2539 aa11.46□□□□□ -0.58
CACNA1A-202ENST00000573710 CRIP1P50238 77 aa11.45□□□□□ -0.58
CACNA1A-202ENST00000573710 FSTL3O95633 263 aa11.44□□□□□ -0.58
CACNA1A-202ENST00000573710 C8orf87E5RJ46 101 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 A0A1W2PNU3 283 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 Q96NJ1 140 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 NRACQ8N912 160 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 ACACBO00763 2458 aa11.42□□□□□ -0.58
CACNA1A-202ENST00000573710 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-202ENST00000573710 CACNA1AO00555 2505 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 Q8IZM0 81 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 Q6JHZ5 121 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 Q8N6K4 173 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.59
CACNA1A-202ENST00000573710 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.59
CACNA1A-202ENST00000573710 CRIPTQ9P021 101 aa11.4□□□□□ -0.59
CACNA1A-202ENST00000573710 C16orf90A8MZG2 172 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 LINC00313P59037 77 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 TYMSOSQ8TAI1 123 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 PRR9Q5T870 116 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 IGLV4-60A0A075B6I1 120 aa11.38□□□□□ -0.59
CACNA1A-202ENST00000573710 COL4A3Q01955 1670 aa11.37□□□□□ -0.59
CACNA1A-202ENST00000573710 TLN1Q9Y490 2541 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-202ENST00000573710 TLN2Q9Y4G6 2542 aa11.37□□□□□ -0.59
CACNA1A-202ENST00000573710 GAS8-AS1O95177 125 aa11.36□□□□□ -0.59
CACNA1A-202ENST00000573710 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
CACNA1A-202ENST00000573710 SMCR5Q8TEV8 140 aa11.36□□□□□ -0.59
CACNA1A-202ENST00000573710 KRTAP27-1Q3LI81 207 aa11.35□□□□□ -0.59
CACNA1A-202ENST00000573710 C1orf229Q6ZS94 237 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-202ENST00000573710 RPL37AP61513 92 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 CR1P17927 2039 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 A0A0D9SG42 100 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 IGLV6-57P01721 117 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 FBXL19-AS1Q494R0 122 aa11.32□□□□□ -0.6
CACNA1A-202ENST00000573710 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
CACNA1A-202ENST00000573710 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-202ENST00000573710 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
CACNA1A-202ENST00000573710 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
CACNA1A-202ENST00000573710 C9orf92A6NGG3 77 aa11.29□□□□□ -0.6
CACNA1A-202ENST00000573710 PCSK5Q92824 1860 aa11.29□□□□□ -0.6
CACNA1A-202ENST00000573710 WDR87Q6ZQQ6 2873 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 Q6ZRU5 148 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 C22orf24Q9Y442 160 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
CACNA1A-202ENST00000573710 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 CXCL6P80162 114 aa11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 COL27A1Q8IZC6 1860 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
CACNA1A-202ENST00000573710 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
CACNA1A-202ENST00000573710 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-202ENST00000573710 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
CACNA1A-202ENST00000573710 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
CACNA1A-202ENST00000573710 LUZP6Q538Z0 58 aa11.21□□□□□ -0.61
CACNA1A-202ENST00000573710 ZNF575Q86XF7 245 aa11.21□□□□□ -0.62
CACNA1A-202ENST00000573710 ANKHD1Q8IWZ3 2542 aaKnown RBP11.21□□□□□ -0.62
CACNA1A-202ENST00000573710 AVPP01185 164 aa11.2□□□□□ -0.62
CACNA1A-202ENST00000573710 LINC00846Q9NV44 126 aa11.2□□□□□ -0.62
CACNA1A-202ENST00000573710 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
CACNA1A-202ENST00000573710 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
CACNA1A-202ENST00000573710 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 KLLNB2CW77 178 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 FHL3Q13643 280 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 MUC7Q8TAX7 377 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 PKD1L2Q7Z442 2459 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-202ENST00000573710 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-202ENST00000573710 WIPF1O43516 503 aa11.17□□□□□ -0.62
CACNA1A-202ENST00000573710 CDSNQ15517 529 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms