RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 A6NDN8 102 aa8.9□□□□□ -0.98
LINC01996-201ENST00000573270 MALP21145 153 aa8.9□□□□□ -0.98
LINC01996-201ENST00000573270 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.98
LINC01996-201ENST00000573270 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
LINC01996-201ENST00000573270 PKD1P98161 4303 aa8.9□□□□□ -0.99
LINC01996-201ENST00000573270 A0A087WZ39 114 aa8.89□□□□□ -0.99
LINC01996-201ENST00000573270 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
LINC01996-201ENST00000573270 SPINK8P0C7L1 97 aa8.89□□□□□ -0.99
LINC01996-201ENST00000573270 HSD52Q0P140 79 aa8.89□□□□□ -0.99
LINC01996-201ENST00000573270 CIRBPQ14011 172 aaKnown RBP8.89□□□□□ -0.99
LINC01996-201ENST00000573270 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
LINC01996-201ENST00000573270 DNAH5Q8TE73 4624 aa8.88□□□□□ -0.99
LINC01996-201ENST00000573270 IGHV1-58A0A0C4DH39 117 aa8.88□□□□□ -0.99
LINC01996-201ENST00000573270 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
LINC01996-201ENST00000573270 J3QQQ9 107 aa8.88□□□□□ -0.99
LINC01996-201ENST00000573270 SPAG11BQ08648 103 aa8.88□□□□□ -0.99
LINC01996-201ENST00000573270 ORAOV1Q8WV07 137 aa8.88□□□□□ -0.99
LINC01996-201ENST00000573270 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
LINC01996-201ENST00000573270 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 A6NJY4 79 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 ZNF815PA8K554 130 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 Q8N814 137 aa8.87□□□□□ -0.99
LINC01996-201ENST00000573270 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
LINC01996-201ENST00000573270 APOMO95445 188 aa8.86□□□□□ -0.99
LINC01996-201ENST00000573270 Q6ZVH6 145 aa8.86□□□□□ -0.99
LINC01996-201ENST00000573270 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
LINC01996-201ENST00000573270 FUSP35637 526 aaKnown RBP eCLIP8.85□□□□□ -0.99
LINC01996-201ENST00000573270 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
LINC01996-201ENST00000573270 PCP2Q8IVA1 136 aa8.85□□□□□ -0.99
LINC01996-201ENST00000573270 HIST1H4GQ99525 98 aa8.85□□□□□ -0.99
LINC01996-201ENST00000573270 TOMM7Q9P0U1 55 aa8.85□□□□□ -0.99
LINC01996-201ENST00000573270 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
LINC01996-201ENST00000573270 C14orf177Q52M58 125 aa8.84□□□□□ -0.99
LINC01996-201ENST00000573270 CFAP161Q6P656 301 aa8.84□□□□□ -0.99
LINC01996-201ENST00000573270 TMEM238C9JI98 176 aa8.83□□□□□ -1
LINC01996-201ENST00000573270 EREGO14944 169 aa8.83□□□□□ -1
LINC01996-201ENST00000573270 HERV-K104P63124 156 aa8.83□□□□□ -1
LINC01996-201ENST00000573270 BATFQ16520 125 aa8.83□□□□□ -1
LINC01996-201ENST00000573270 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
LINC01996-201ENST00000573270 IGKV2D-26A0A0A0MRZ7 120 aa8.82□□□□□ -1
LINC01996-201ENST00000573270 IGLV5-39A0A0G2JS06 123 aa8.82□□□□□ -1
LINC01996-201ENST00000573270 HINT1P49773 126 aaPredicted RBP8.82□□□□□ -1
LINC01996-201ENST00000573270 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
LINC01996-201ENST00000573270 A0A1B0GVY2 172 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 PRSS2P07478 247 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 SMIM13P0DJ93 91 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 KRTAP10-2P60368 255 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 Q8IZM0 81 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 COX7B2Q8TF08 81 aa8.81□□□□□ -1
LINC01996-201ENST00000573270 SPANXB1Q9NS25 103 aaPredicted RBP8.81□□□□□ -1
LINC01996-201ENST00000573270 DYNC1H1Q14204 4646 aaKnown RBP8.81□□□□□ -1
LINC01996-201ENST00000573270 TIMM17BO60830 172 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 KIAA0087Q14695 138 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 BVES-AS1Q5T3Y7 98 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 CEND1Q8N111 149 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 NTN5Q8WTR8 489 aaPredicted RBP8.8□□□□□ -1
LINC01996-201ENST00000573270 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
LINC01996-201ENST00000573270 A0A0J9YXY3 114 aa8.79□□□□□ -1
LINC01996-201ENST00000573270 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
LINC01996-201ENST00000573270 C2orf82Q6UX34 121 aa8.79□□□□□ -1
LINC01996-201ENST00000573270 C2orf91Q6ZV80 131 aa8.79□□□□□ -1
LINC01996-201ENST00000573270 CARD19Q96LW7 228 aa8.79□□□□□ -1
LINC01996-201ENST00000573270 IGLV5-52A0A0A0MRZ9 124 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 SLPIP03973 132 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 IFITM1P13164 125 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 LCE2CQ5TA81 110 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 Q6ZRU5 148 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 TP73-AS1Q9UF72 201 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 PKHD1P08F94 4074 aa8.78□□□□□ -1
LINC01996-201ENST00000573270 NDUFA1O15239 70 aa8.77□□□□□ -1.01
LINC01996-201ENST00000573270 CNBPP62633 177 aaKnown RBP8.77□□□□□ -1.01
LINC01996-201ENST00000573270 SYCNQ0VAF6 134 aa8.77□□□□□ -1.01
LINC01996-201ENST00000573270 LINC01620Q4KN68 170 aa8.77□□□□□ -1.01
LINC01996-201ENST00000573270 C10orf25Q5T742 122 aa8.77□□□□□ -1.01
LINC01996-201ENST00000573270 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
LINC01996-201ENST00000573270 C2orf48Q96LS8 159 aa8.77□□□□□ -1.01
LINC01996-201ENST00000573270 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.76□□□□□ -1.01
LINC01996-201ENST00000573270 CXCL5P42830 114 aa8.76□□□□□ -1.01
LINC01996-201ENST00000573270 CKS1BP61024 79 aa8.76□□□□□ -1.01
LINC01996-201ENST00000573270 C6orf226Q5I0X4 101 aa8.76□□□□□ -1.01
LINC01996-201ENST00000573270 C6orf48Q9UBA6 75 aa8.75□□□□□ -1.01
LINC01996-201ENST00000573270 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
LINC01996-201ENST00000573270 PPDPFQ9H3Y8 114 aa8.74□□□□□ -1.01
LINC01996-201ENST00000573270 F8WDY8 70 aa8.73□□□□□ -1.01
LINC01996-201ENST00000573270 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
LINC01996-201ENST00000573270 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
LINC01996-201ENST00000573270 LRP1BQ9NZR2 4599 aa8.73□□□□□ -1.01
LINC01996-201ENST00000573270 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
LINC01996-201ENST00000573270 LYRM7Q5U5X0 104 aa8.72□□□□□ -1.01
LINC01996-201ENST00000573270 SPANXDQ9BXN6 97 aa8.72□□□□□ -1.01
LINC01996-201ENST00000573270 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
LINC01996-201ENST00000573270 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
LINC01996-201ENST00000573270 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
LINC01996-201ENST00000573270 C16orf90A8MZG2 172 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms