RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-206ENST00000571263 TRBV30A0A0K0K1B3 111 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 TIMM17BO60830 172 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 TSPEAR-AS2P59090 65 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 COX17Q14061 63 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 RNF151Q2KHN1 245 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 CAMK2N2Q96S95 79 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 PKIGQ9Y2B9 76 aa7.86□□□□□ -1.15
CDRT1-206ENST00000571263 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
CDRT1-206ENST00000571263 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
CDRT1-206ENST00000571263 Q6ZVH6 145 aa7.85□□□□□ -1.15
CDRT1-206ENST00000571263 LRCOL1A6NCL2 159 aa7.84□□□□□ -1.15
CDRT1-206ENST00000571263 TMEM238C9JI98 176 aa7.84□□□□□ -1.15
CDRT1-206ENST00000571263 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
CDRT1-206ENST00000571263 MEIG1Q5JSS6 88 aa7.84□□□□□ -1.15
CDRT1-206ENST00000571263 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
CDRT1-206ENST00000571263 PRO1933Q9H354 126 aa7.84□□□□□ -1.15
CDRT1-206ENST00000571263 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
CDRT1-206ENST00000571263 A0A087WTM6 91 aa7.82□□□□□ -1.16
CDRT1-206ENST00000571263 HNRNPA3P51991 378 aaKnown RBP7.82□□□□□ -1.16
CDRT1-206ENST00000571263 TAL2Q16559 108 aa7.82□□□□□ -1.16
CDRT1-206ENST00000571263 C2orf82Q6UX34 121 aa7.82□□□□□ -1.16
CDRT1-206ENST00000571263 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
CDRT1-206ENST00000571263 TTTY13Q9BZ97 58 aa7.82□□□□□ -1.16
CDRT1-206ENST00000571263 SPANXB1Q9NS25 103 aaPredicted RBP7.82□□□□□ -1.16
CDRT1-206ENST00000571263 ERG28Q9UKR5 140 aa7.82□□□□□ -1.16
CDRT1-206ENST00000571263 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
CDRT1-206ENST00000571263 LINC00336Q6ZUF6 198 aa7.81□□□□□ -1.16
CDRT1-206ENST00000571263 Q8N814 137 aa7.81□□□□□ -1.16
CDRT1-206ENST00000571263 LECT2O14960 151 aa7.8□□□□□ -1.16
CDRT1-206ENST00000571263 IFITM1P13164 125 aa7.8□□□□□ -1.16
CDRT1-206ENST00000571263 LINC00158P58513 81 aa7.8□□□□□ -1.16
CDRT1-206ENST00000571263 SRSF9Q13242 221 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDRT1-206ENST00000571263 Q6ZRU5 148 aa7.8□□□□□ -1.16
CDRT1-206ENST00000571263 PPDPFQ9H3Y8 114 aa7.8□□□□□ -1.16
CDRT1-206ENST00000571263 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
CDRT1-206ENST00000571263 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 DDTP30046 118 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 SPANXCQ9NY87 97 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 C6orf48Q9UBA6 75 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 VPS13DQ5THJ4 4388 aa7.79□□□□□ -1.16
CDRT1-206ENST00000571263 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 RTL8CO15255 209 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 SMIM13P0DJ93 91 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 PFN2P35080 140 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 WFDC2Q14508 124 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 C10orf25Q5T742 122 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 HIST1H4GQ99525 98 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
CDRT1-206ENST00000571263 HSD52Q0P140 79 aa7.77□□□□□ -1.17
CDRT1-206ENST00000571263 C9orf163Q8N9P6 203 aa7.77□□□□□ -1.17
CDRT1-206ENST00000571263 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
CDRT1-206ENST00000571263 M0R143 59 aa7.76□□□□□ -1.17
CDRT1-206ENST00000571263 SLPIP03973 132 aa7.76□□□□□ -1.17
CDRT1-206ENST00000571263 LITAFQ99732 161 aa7.76□□□□□ -1.17
CDRT1-206ENST00000571263 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
CDRT1-206ENST00000571263 DNAH1Q9P2D7 4330 aa7.75□□□□□ -1.17
CDRT1-206ENST00000571263 LOC107984156A0A0G2JMH3 177 aa7.75□□□□□ -1.17
CDRT1-206ENST00000571263 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
CDRT1-206ENST00000571263 TNP2Q05952 138 aa7.75□□□□□ -1.17
CDRT1-206ENST00000571263 ARL17AQ8IVW1 177 aa7.75□□□□□ -1.17
CDRT1-206ENST00000571263 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
CDRT1-206ENST00000571263 ALMS1Q8TCU4 4167 aa7.74□□□□□ -1.17
CDRT1-206ENST00000571263 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.74□□□□□ -1.17
CDRT1-206ENST00000571263 A0A0U1RRA0 63 aa7.74□□□□□ -1.17
CDRT1-206ENST00000571263 A6NJY4 79 aa7.74□□□□□ -1.17
CDRT1-206ENST00000571263 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
CDRT1-206ENST00000571263 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
CDRT1-206ENST00000571263 CEND1Q8N111 149 aa7.73□□□□□ -1.17
CDRT1-206ENST00000571263 LINC00308Q8TCZ7 52 aa7.73□□□□□ -1.17
CDRT1-206ENST00000571263 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
CDRT1-206ENST00000571263 IGLV5-52A0A0A0MRZ9 124 aa7.72□□□□□ -1.17
CDRT1-206ENST00000571263 PCP4L1A6NKN8 68 aa7.72□□□□□ -1.17
CDRT1-206ENST00000571263 MUSTN1Q8IVN3 82 aa7.72□□□□□ -1.17
CDRT1-206ENST00000571263 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
CDRT1-206ENST00000571263 C16orf90A8MZG2 172 aa7.71□□□□□ -1.18
CDRT1-206ENST00000571263 RPL18AQ02543 176 aaKnown RBP7.71□□□□□ -1.18
CDRT1-206ENST00000571263 NDUFC2O95298 119 aa7.7□□□□□ -1.18
CDRT1-206ENST00000571263 Q6ZRP5 223 aa7.7□□□□□ -1.18
CDRT1-206ENST00000571263 DAND5Q8N907 189 aa7.7□□□□□ -1.18
CDRT1-206ENST00000571263 LYSTQ99698 3801 aa7.7□□□□□ -1.18
CDRT1-206ENST00000571263 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
CDRT1-206ENST00000571263 GAGE2BQ13066 116 aa7.69□□□□□ -1.18
CDRT1-206ENST00000571263 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
CDRT1-206ENST00000571263 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
CDRT1-206ENST00000571263 A6NDN8 102 aa7.68□□□□□ -1.18
CDRT1-206ENST00000571263 BVES-AS1Q5T3Y7 98 aa7.68□□□□□ -1.18
CDRT1-206ENST00000571263 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
CDRT1-206ENST00000571263 A4D1N5 150 aa7.67□□□□□ -1.18
CDRT1-206ENST00000571263 HINT1P49773 126 aaPredicted RBP7.67□□□□□ -1.18
CDRT1-206ENST00000571263 NPC2P61916 151 aa7.67□□□□□ -1.18
CDRT1-206ENST00000571263 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
CDRT1-206ENST00000571263 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
CDRT1-206ENST00000571263 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
CDRT1-206ENST00000571263 DNAH6Q9C0G6 4158 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms