RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 J3QL48 77 aa11.23□□□□□ -0.61
LITAF-204ENST00000570798 PRSS2P07478 247 aa11.23□□□□□ -0.61
LITAF-204ENST00000570798 RAB5BP61020 215 aa11.23□□□□□ -0.61
LITAF-204ENST00000570798 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
LITAF-204ENST00000570798 PACRGQ96M98 296 aaPredicted RBP11.23□□□□□ -0.61
LITAF-204ENST00000570798 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
LITAF-204ENST00000570798 FAT3Q8TDW7 4589 aa11.23□□□□□ -0.61
LITAF-204ENST00000570798 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
LITAF-204ENST00000570798 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
LITAF-204ENST00000570798 HBDP02042 147 aa11.22□□□□□ -0.61
LITAF-204ENST00000570798 PDZD11Q5EBL8 140 aa11.22□□□□□ -0.61
LITAF-204ENST00000570798 C6orf226Q5I0X4 101 aa11.22□□□□□ -0.61
LITAF-204ENST00000570798 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
LITAF-204ENST00000570798 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
LITAF-204ENST00000570798 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
LITAF-204ENST00000570798 CKS1BP61024 79 aa11.2□□□□□ -0.62
LITAF-204ENST00000570798 HERC1Q15751 4861 aa11.19□□□□□ -0.62
LITAF-204ENST00000570798 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
LITAF-204ENST00000570798 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
LITAF-204ENST00000570798 FAM168BA1KXE4 195 aa11.18□□□□□ -0.62
LITAF-204ENST00000570798 IGLC3P0DOY3 106 aa11.18□□□□□ -0.62
LITAF-204ENST00000570798 KRTAP7-1Q8IUC3 87 aa11.18□□□□□ -0.62
LITAF-204ENST00000570798 F8VRH5 84 aa11.17□□□□□ -0.62
LITAF-204ENST00000570798 ATP5LO75964 103 aa11.17□□□□□ -0.62
LITAF-204ENST00000570798 CXCL5P42830 114 aa11.17□□□□□ -0.62
LITAF-204ENST00000570798 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
LITAF-204ENST00000570798 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
LITAF-204ENST00000570798 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
LITAF-204ENST00000570798 COX7B2Q8TF08 81 aa11.16□□□□□ -0.62
LITAF-204ENST00000570798 SPINK8P0C7L1 97 aa11.15□□□□□ -0.62
LITAF-204ENST00000570798 NDUFA6P56556 154 aa11.15□□□□□ -0.62
LITAF-204ENST00000570798 TRGC2P03986 189 aa11.14□□□□□ -0.63
LITAF-204ENST00000570798 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
LITAF-204ENST00000570798 H3BRM9 83 aa11.13□□□□□ -0.63
LITAF-204ENST00000570798 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
LITAF-204ENST00000570798 FAM19A5Q7Z5A7 132 aaPredicted RBP11.13□□□□□ -0.63
LITAF-204ENST00000570798 PSORS1C2Q9UIG4 136 aa11.13□□□□□ -0.63
LITAF-204ENST00000570798 IGLV5-39A0A0G2JS06 123 aa11.12□□□□□ -0.63
LITAF-204ENST00000570798 SPINK6Q6UWN8 80 aa11.12□□□□□ -0.63
LITAF-204ENST00000570798 BAGE3Q86Y29 109 aa11.12□□□□□ -0.63
LITAF-204ENST00000570798 COLCA2A8K830 154 aa11.11□□□□□ -0.63
LITAF-204ENST00000570798 MT1HL1P0DM35 61 aa11.11□□□□□ -0.63
LITAF-204ENST00000570798 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
LITAF-204ENST00000570798 C11orf86A6NJI1 115 aa11.1□□□□□ -0.63
LITAF-204ENST00000570798 IFI27L1Q96BM0 104 aa11.09□□□□□ -0.63
LITAF-204ENST00000570798 TRAV12-1A0A0B4J245 112 aa11.08□□□□□ -0.64
LITAF-204ENST00000570798 M0QXV9 152 aa11.08□□□□□ -0.64
LITAF-204ENST00000570798 HSBP1O75506 76 aa11.08□□□□□ -0.64
LITAF-204ENST00000570798 LINC00310P59036 64 aa11.08□□□□□ -0.64
LITAF-204ENST00000570798 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
LITAF-204ENST00000570798 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
LITAF-204ENST00000570798 SERTAD4-AS1Q5TG53 156 aa11.07□□□□□ -0.64
LITAF-204ENST00000570798 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
LITAF-204ENST00000570798 ODF1Q14990 250 aa11.06□□□□□ -0.64
LITAF-204ENST00000570798 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
LITAF-204ENST00000570798 TMEM170BQ5T4T1 132 aa11.05□□□□□ -0.64
LITAF-204ENST00000570798 LINC01600Q96MT4 127 aa11.05□□□□□ -0.64
LITAF-204ENST00000570798 SERF1AO75920 110 aa11.04□□□□□ -0.64
LITAF-204ENST00000570798 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
LITAF-204ENST00000570798 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
LITAF-204ENST00000570798 NUPR1O60356 82 aa11.02□□□□□ -0.65
LITAF-204ENST00000570798 UBE2BP63146 152 aa11.02□□□□□ -0.65
LITAF-204ENST00000570798 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
LITAF-204ENST00000570798 PLA2G2DQ9UNK4 145 aa11.02□□□□□ -0.65
LITAF-204ENST00000570798 TMEM223A0PJW6 202 aa11.01□□□□□ -0.65
LITAF-204ENST00000570798 TP73-AS1Q9UF72 201 aa11.01□□□□□ -0.65
LITAF-204ENST00000570798 SCO1O75880 301 aa11□□□□□ -0.65
LITAF-204ENST00000570798 LEPROTL1O95214 131 aa11□□□□□ -0.65
LITAF-204ENST00000570798 LBHQ53QV2 105 aaPredicted RBP10.99□□□□□ -0.65
LITAF-204ENST00000570798 SFTA2Q6UW10 78 aa10.99□□□□□ -0.65
LITAF-204ENST00000570798 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
LITAF-204ENST00000570798 PFN2P35080 140 aa10.98□□□□□ -0.65
LITAF-204ENST00000570798 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
LITAF-204ENST00000570798 TNXBP22105 4242 aa10.98□□□□□ -0.65
LITAF-204ENST00000570798 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
LITAF-204ENST00000570798 KRTAP10-8P60410 259 aa10.97□□□□□ -0.65
LITAF-204ENST00000570798 COX17Q14061 63 aa10.97□□□□□ -0.65
LITAF-204ENST00000570798 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
LITAF-204ENST00000570798 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
LITAF-204ENST00000570798 HSPB8Q9UJY1 196 aa10.95□□□□□ -0.66
LITAF-204ENST00000570798 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
LITAF-204ENST00000570798 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
LITAF-204ENST00000570798 H0Y8G0 127 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 H0Y9J4 135 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BKO60814 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BJP06899 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 FABP4P15090 132 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BOP23527 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BBP33778 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BDP58876 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BCP62807 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST2H2BEQ16778 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BHQ93079 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BNQ99877 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 HIST1H2BMQ99879 126 aa10.93□□□□□ -0.66
LITAF-204ENST00000570798 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.66
LITAF-204ENST00000570798 VPREB1P12018 145 aa10.9□□□□□ -0.66
LITAF-204ENST00000570798 ZNF861PO60384 105 aa10.89□□□□□ -0.67
LITAF-204ENST00000570798 PLNP26678 52 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms