RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 HERC1Q15751 4861 aa6.13□□□□□ -1.43
GTF3C1-212ENST00000570129 APOMO95445 188 aa6.13□□□□□ -1.43
GTF3C1-212ENST00000570129 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-212ENST00000570129 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-212ENST00000570129 PMVKQ15126 192 aa6.13□□□□□ -1.43
GTF3C1-212ENST00000570129 LINC00469Q8N7U9 141 aa6.13□□□□□ -1.43
GTF3C1-212ENST00000570129 LOC107984640A0A0U1RRK4 108 aa6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 GAGE2EQ4V326 116 aa6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 MRPL35Q9NZE8 188 aaKnown RBP6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
GTF3C1-212ENST00000570129 TINCRA0A1B0GVN0 87 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 NDUFA1O15239 70 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 SERF1AO75920 110 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 HBDP02042 147 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 NPSP0C0P6 89 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 C9orf129Q5T035 196 aaKnown RBP6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 BAGE3Q86Y29 109 aa6.11□□□□□ -1.43
GTF3C1-212ENST00000570129 DMBT1Q9UGM3 2413 aaPredicted RBP6.1□□□□□ -1.43
GTF3C1-212ENST00000570129 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
GTF3C1-212ENST00000570129 IGLV5-45A0A087WSX0 123 aa6.1□□□□□ -1.43
GTF3C1-212ENST00000570129 ZNF22P17026 224 aaPredicted RBP6.1□□□□□ -1.43
GTF3C1-212ENST00000570129 HERVK_113P63121 156 aa6.1□□□□□ -1.43
GTF3C1-212ENST00000570129 C6orf226Q5I0X4 101 aa6.1□□□□□ -1.43
GTF3C1-212ENST00000570129 IGLC3P0DOY3 106 aa6.09□□□□□ -1.43
GTF3C1-212ENST00000570129 G0S2P27469 103 aa6.09□□□□□ -1.43
GTF3C1-212ENST00000570129 ODF1Q14990 250 aa6.09□□□□□ -1.43
GTF3C1-212ENST00000570129 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
GTF3C1-212ENST00000570129 LINC01561Q8N1V8 128 aa6.09□□□□□ -1.43
GTF3C1-212ENST00000570129 RAB5BP61020 215 aa6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 SERTAD4-AS1Q5TG53 156 aa6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 CHCHD1Q96BP2 118 aaKnown RBP6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 XAGE1AQ9HD64 81 aa6.08□□□□□ -1.44
GTF3C1-212ENST00000570129 H0Y8G0 127 aa6.07□□□□□ -1.44
GTF3C1-212ENST00000570129 PRSS2P07478 247 aa6.07□□□□□ -1.44
GTF3C1-212ENST00000570129 FABP4P15090 132 aa6.07□□□□□ -1.44
GTF3C1-212ENST00000570129 Q8IZM0 81 aa6.07□□□□□ -1.44
GTF3C1-212ENST00000570129 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
GTF3C1-212ENST00000570129 CHTOPQ9Y3Y2 248 aaKnown RBP6.07□□□□□ -1.44
GTF3C1-212ENST00000570129 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BKO60814 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 ATP5LO75964 103 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BJP06899 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BOP23527 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BBP33778 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BDP58876 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 CKS1BP61024 79 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BCP62807 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST2H2BEQ16778 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BHQ93079 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 ZNF625Q96I27 306 aaPredicted RBP6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 PACRGQ96M98 296 aaPredicted RBP6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BNQ99877 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 HIST1H2BMQ99879 126 aa6.06□□□□□ -1.44
GTF3C1-212ENST00000570129 TRBV30A0A0K0K1B3 111 aa6.05□□□□□ -1.44
GTF3C1-212ENST00000570129 HSBP1O75506 76 aa6.05□□□□□ -1.44
GTF3C1-212ENST00000570129 SEC11AP67812 179 aa6.05□□□□□ -1.44
GTF3C1-212ENST00000570129 TMEM170BQ5T4T1 132 aa6.05□□□□□ -1.44
GTF3C1-212ENST00000570129 Q8NDZ9 215 aa6.05□□□□□ -1.44
GTF3C1-212ENST00000570129 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
GTF3C1-212ENST00000570129 NDUFC2-KCTD14E9PQ53 114 aa6.04□□□□□ -1.44
GTF3C1-212ENST00000570129 F8VRH5 84 aa6.04□□□□□ -1.44
GTF3C1-212ENST00000570129 F8WDY8 70 aa6.04□□□□□ -1.44
GTF3C1-212ENST00000570129 LINC00474Q9P2X8 69 aa6.04□□□□□ -1.44
GTF3C1-212ENST00000570129 TMEM223A0PJW6 202 aa6.03□□□□□ -1.44
GTF3C1-212ENST00000570129 LINC01549A6NIU2 74 aa6.03□□□□□ -1.44
GTF3C1-212ENST00000570129 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
GTF3C1-212ENST00000570129 SRSF9Q13242 221 aaKnown RBP eCLIP6.03□□□□□ -1.44
GTF3C1-212ENST00000570129 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
GTF3C1-212ENST00000570129 TRAV12-1A0A0B4J245 112 aa6.02□□□□□ -1.45
GTF3C1-212ENST00000570129 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
GTF3C1-212ENST00000570129 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
GTF3C1-212ENST00000570129 PFN2P35080 140 aa6.02□□□□□ -1.45
GTF3C1-212ENST00000570129 TSPEAR-AS2P59090 65 aa6.02□□□□□ -1.45
GTF3C1-212ENST00000570129 H3BRM9 83 aa6.01□□□□□ -1.45
GTF3C1-212ENST00000570129 LEPROTL1O95214 131 aa6.01□□□□□ -1.45
GTF3C1-212ENST00000570129 C22orf24Q9Y442 160 aa6.01□□□□□ -1.45
GTF3C1-212ENST00000570129 GAGE10A6NGK3 116 aa6□□□□□ -1.45
GTF3C1-212ENST00000570129 M0QXV9 152 aa6□□□□□ -1.45
GTF3C1-212ENST00000570129 ATP6V1G1O75348 118 aa6□□□□□ -1.45
GTF3C1-212ENST00000570129 C1orf137Q5JT78 98 aa6□□□□□ -1.45
GTF3C1-212ENST00000570129 RPL37AP8A6NKH3 93 aa5.99□□□□□ -1.45
GTF3C1-212ENST00000570129 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
GTF3C1-212ENST00000570129 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
GTF3C1-212ENST00000570129 SND1-IT1Q9HBX3 110 aa5.98□□□□□ -1.45
GTF3C1-212ENST00000570129 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
GTF3C1-212ENST00000570129 TNXBP22105 4242 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms