RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 RETNQ9HD89 108 aa8.16□□□□□ -1.1
PDXDC1-217ENST00000570001 CELA1Q9UNI1 258 aa8.16□□□□□ -1.1
PDXDC1-217ENST00000570001 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
PDXDC1-217ENST00000570001 C1orf43Q9BWL3 253 aa8.16□□□□□ -1.1
PDXDC1-217ENST00000570001 H3BT86 120 aa8.15□□□□□ -1.1
PDXDC1-217ENST00000570001 NF1P21359 2839 aa8.15□□□□□ -1.1
PDXDC1-217ENST00000570001 BAALC-AS2P0C853 105 aa8.15□□□□□ -1.11
PDXDC1-217ENST00000570001 A0A1B0GV72 72 aa8.14□□□□□ -1.11
PDXDC1-217ENST00000570001 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
PDXDC1-217ENST00000570001 DEFB131BA0A096LNP1 70 aa8.14□□□□□ -1.11
PDXDC1-217ENST00000570001 H0YGX0 51 aa8.14□□□□□ -1.11
PDXDC1-217ENST00000570001 TTC32Q5I0X7 151 aa8.14□□□□□ -1.11
PDXDC1-217ENST00000570001 WFDC9Q8NEX5 89 aa8.14□□□□□ -1.11
PDXDC1-217ENST00000570001 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
PDXDC1-217ENST00000570001 Q8IZM0 81 aa8.13□□□□□ -1.11
PDXDC1-217ENST00000570001 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
PDXDC1-217ENST00000570001 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
PDXDC1-217ENST00000570001 NKAPP1Q8N9T2 125 aa8.12□□□□□ -1.11
PDXDC1-217ENST00000570001 LITAFQ99732 161 aa8.12□□□□□ -1.11
PDXDC1-217ENST00000570001 KLK5Q9Y337 293 aaPredicted RBP8.12□□□□□ -1.11
PDXDC1-217ENST00000570001 SPATA3Q8NHX4 192 aa8.12□□□□□ -1.11
PDXDC1-217ENST00000570001 F8WEM9 126 aa8.12□□□□□ -1.11
PDXDC1-217ENST00000570001 LST1O00453 97 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 KRTAP24-1Q3LI83 254 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 Q8NAQ8 132 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 TEX49A0A1B0GTD5 131 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 FAM104AQ969W3 186 aa8.11□□□□□ -1.11
PDXDC1-217ENST00000570001 A0A0J9YWU9 116 aa8.1□□□□□ -1.11
PDXDC1-217ENST00000570001 NCR3O14931 201 aa8.1□□□□□ -1.11
PDXDC1-217ENST00000570001 Q6ZTC4 211 aa8.1□□□□□ -1.11
PDXDC1-217ENST00000570001 LINC00526Q96FQ7 95 aa8.1□□□□□ -1.11
PDXDC1-217ENST00000570001 LECT2O14960 151 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 PRB2P02812 416 aaPredicted RBP8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 NANOS2P60321 138 aaKnown RBP8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 LINC00612Q8N6U2 182 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 SPATA25Q9BR10 227 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.11
PDXDC1-217ENST00000570001 C15orf53Q8NAA6 179 aa8.08□□□□□ -1.12
PDXDC1-217ENST00000570001 PRO0461Q9UI25 63 aa8.08□□□□□ -1.12
PDXDC1-217ENST00000570001 TRACP01848 142 aa8.07□□□□□ -1.12
PDXDC1-217ENST00000570001 UBE2BP63146 152 aa8.07□□□□□ -1.12
PDXDC1-217ENST00000570001 ORMDL1Q9P0S3 153 aa8.07□□□□□ -1.12
PDXDC1-217ENST00000570001 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 LYPD5Q6UWN5 251 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 SOSTDC1Q6X4U4 206 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 MAST4O15021 2626 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 CSMD2Q7Z408 3487 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 COX17Q14061 63 aa8.06□□□□□ -1.12
PDXDC1-217ENST00000570001 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
PDXDC1-217ENST00000570001 TEP1Q99973 2627 aaKnown RBP8.05□□□□□ -1.12
PDXDC1-217ENST00000570001 Q8N3U1 123 aa8.05□□□□□ -1.12
PDXDC1-217ENST00000570001 TENM4Q6N022 2769 aa8.05□□□□□ -1.12
PDXDC1-217ENST00000570001 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
PDXDC1-217ENST00000570001 LINC01561Q8N1V8 128 aa8.05□□□□□ -1.12
PDXDC1-217ENST00000570001 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 NBEAL2Q6ZNJ1 2754 aa8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 CYSRT1A8MQ03 144 aa8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 UNQ6190/PRO20217Q6UXQ8 127 aa8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 TRAV10A0A0B4J240 114 aa8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
PDXDC1-217ENST00000570001 WFDC10BQ8IUB3 73 aa8.03□□□□□ -1.12
PDXDC1-217ENST00000570001 RPL28P46779 137 aaKnown RBP8.03□□□□□ -1.12
PDXDC1-217ENST00000570001 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
PDXDC1-217ENST00000570001 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
PDXDC1-217ENST00000570001 ACYP1P07311 99 aa8.02□□□□□ -1.13
PDXDC1-217ENST00000570001 NSD1Q96L73 2696 aaPredicted RBP8.01□□□□□ -1.13
PDXDC1-217ENST00000570001 C6orf223Q8N319 242 aa8.01□□□□□ -1.13
PDXDC1-217ENST00000570001 MT-ATP8P03928 68 aa8.01□□□□□ -1.13
PDXDC1-217ENST00000570001 KRTAP10-11P60412 298 aa8□□□□□ -1.13
PDXDC1-217ENST00000570001 HIVEP1P15822 2718 aa8□□□□□ -1.13
PDXDC1-217ENST00000570001 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
PDXDC1-217ENST00000570001 SLPIP03973 132 aa8□□□□□ -1.13
PDXDC1-217ENST00000570001 C6orf99Q4VX62 202 aa8□□□□□ -1.13
PDXDC1-217ENST00000570001 M0QXV9 152 aa7.99□□□□□ -1.13
PDXDC1-217ENST00000570001 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
PDXDC1-217ENST00000570001 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
PDXDC1-217ENST00000570001 PKIGQ9Y2B9 76 aa7.99□□□□□ -1.13
PDXDC1-217ENST00000570001 VPS13CQ709C8 3753 aa7.98□□□□□ -1.13
PDXDC1-217ENST00000570001 H3BNG1 76 aa7.98□□□□□ -1.13
PDXDC1-217ENST00000570001 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
PDXDC1-217ENST00000570001 TMEM256-PLSCR3K7ERE1 68 aa7.97□□□□□ -1.13
PDXDC1-217ENST00000570001 XGP55808 180 aa7.96□□□□□ -1.13
PDXDC1-217ENST00000570001 SYCNQ0VAF6 134 aa7.96□□□□□ -1.13
PDXDC1-217ENST00000570001 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.13
PDXDC1-217ENST00000570001 A0A087WYN8 130 aa7.96□□□□□ -1.14
PDXDC1-217ENST00000570001 ESRGQ1W209 222 aa7.96□□□□□ -1.14
PDXDC1-217ENST00000570001 NDUFC2O95298 119 aa7.96□□□□□ -1.14
PDXDC1-217ENST00000570001 PDZD2O15018 2839 aa7.96□□□□□ -1.14
PDXDC1-217ENST00000570001 hADV29S1A0JD25 119 aa7.95□□□□□ -1.14
PDXDC1-217ENST00000570001 JMJD7-PLA2G4BH0Y9G9 81 aa7.95□□□□□ -1.14
PDXDC1-217ENST00000570001 IGKV2-28A0A075B6P5 120 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms