RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 NUPR1O60356 82 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 TLX1NBP0CAT3 122 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 ASB16-AS1Q495Z4 193 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 AKR1C8PQ5T2L2 129 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 LYZL1Q6UWQ5 148 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 MRPL52Q86TS9 123 aaKnown RBP3.4□□□□□ -1.87
UBFD1-209ENST00000569919 LINC00337Q8N6G1 96 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 GATD1Q8NB37 220 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 OR10D4PQ8NGN7 298 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 MAP1LC3B2A6NCE7 125 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 SDHAF1A6NFY7 115 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 NDUFA1O15239 70 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 CTRLP40313 264 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 SMAGPQ0VAQ4 97 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 C5orf38Q86SI9 138 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 C9orf62Q8N4C0 152 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 ENKURQ8TC29 256 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 MRAP2Q96G30 205 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 MAP1LC3BQ9GZQ8 125 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 CYTL1Q9NRR1 136 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 ALG5Q9Y673 324 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 V9GYY9 64 aa3.39□□□□□ -1.87
UBFD1-209ENST00000569919 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
UBFD1-209ENST00000569919 IFNA1P01562 189 aa3.38□□□□□ -1.87
UBFD1-209ENST00000569919 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
UBFD1-209ENST00000569919 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
UBFD1-209ENST00000569919 SMIM15Q7Z3B0 74 aa3.38□□□□□ -1.87
UBFD1-209ENST00000569919 BOD1L2Q8IYS8 172 aa3.38□□□□□ -1.87
UBFD1-209ENST00000569919 RPL39LQ96EH5 51 aaKnown RBP3.38□□□□□ -1.87
UBFD1-209ENST00000569919 TRAV13-1A0A0B4J241 112 aa3.37□□□□□ -1.87
UBFD1-209ENST00000569919 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
UBFD1-209ENST00000569919 PFDN1O60925 122 aa3.37□□□□□ -1.87
UBFD1-209ENST00000569919 GIPP09681 153 aaPredicted RBP3.37□□□□□ -1.87
UBFD1-209ENST00000569919 RPL7L1Q6DKI1 246 aaKnown RBP3.37□□□□□ -1.87
UBFD1-209ENST00000569919 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
UBFD1-209ENST00000569919 MARVELD1Q9BSK0 173 aa3.37□□□□□ -1.87
UBFD1-209ENST00000569919 SMDT1Q9H4I9 107 aa3.37□□□□□ -1.87
UBFD1-209ENST00000569919 C7orf77A4D0Y5 90 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 PPP1R2P9O14990 202 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 RPL35P42766 123 aaKnown RBP3.36□□□□□ -1.87
UBFD1-209ENST00000569919 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 FP248Q71RG6 208 aaPredicted RBP3.36□□□□□ -1.87
UBFD1-209ENST00000569919 ORAOV1Q8WV07 137 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 KRTAP4-1Q9BYQ7 146 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 ST20Q9HBF5 79 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 BIN3Q9NQY0 253 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 ANAPC11Q9NYG5 84 aa3.36□□□□□ -1.87
UBFD1-209ENST00000569919 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 TRBV30A0A0K0K1B3 111 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 NDUFC2-KCTD14E9PQ53 114 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 BCE1O60756 84 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 POLR2KP53803 58 aaKnown RBP3.35□□□□□ -1.87
UBFD1-209ENST00000569919 SFT2D1Q8WV19 159 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 MBD3L1Q8WWY6 194 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 SMIM12Q96EX1 92 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 CNFNQ9BYD5 112 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 C6orf48Q9UBA6 75 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 C22orf24Q9Y442 160 aa3.35□□□□□ -1.87
UBFD1-209ENST00000569919 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 TRBV27A0A0K0K1C4 114 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 A0A1B0GVG6 124 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 DEFA1P59665 94 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 KIAA0087Q14695 138 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 LINC00299Q6ZSB3 139 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 KCNRGQ8N5I3 272 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 S100ZQ8WXG8 99 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 PACRGQ96M98 296 aaPredicted RBP3.34□□□□□ -1.87
UBFD1-209ENST00000569919 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 TMEM242Q9NWH2 141 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
UBFD1-209ENST00000569919 K7EN84 100 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 UPK1BO75841 260 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 FCER1GP30273 86 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 GNG4P50150 75 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 FOXA3P55318 350 aaPredicted RBP3.33□□□□□ -1.88
UBFD1-209ENST00000569919 CCL20P78556 96 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 CENPWQ5EE01 88 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
UBFD1-209ENST00000569919 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
UBFD1-209ENST00000569919 RNASE7Q9H1E1 156 aaKnown RBP3.33□□□□□ -1.88
UBFD1-209ENST00000569919 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
UBFD1-209ENST00000569919 ZNF727A8MUV8 499 aa3.32□□□□□ -1.88
UBFD1-209ENST00000569919 UMAD1C9J7I0 102 aa3.32□□□□□ -1.88
UBFD1-209ENST00000569919 MT1HP80294 61 aa3.32□□□□□ -1.88
UBFD1-209ENST00000569919 A0A1B0GV50 99 aa3.31□□□□□ -1.88
UBFD1-209ENST00000569919 PPP1R17O96001 155 aa3.31□□□□□ -1.88
UBFD1-209ENST00000569919 UBE2AP49459 152 aa3.31□□□□□ -1.88
UBFD1-209ENST00000569919 TAL2Q16559 108 aa3.31□□□□□ -1.88
UBFD1-209ENST00000569919 Q5BKY6 102 aa3.31□□□□□ -1.88
UBFD1-209ENST00000569919 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
UBFD1-209ENST00000569919 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
UBFD1-209ENST00000569919 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
UBFD1-209ENST00000569919 IFITM3Q01628 133 aa3.3□□□□□ -1.88
UBFD1-209ENST00000569919 C2orf82Q6UX34 121 aa3.3□□□□□ -1.88
UBFD1-209ENST00000569919 Q6ZUT4 128 aa3.3□□□□□ -1.88
UBFD1-209ENST00000569919 FAM213BQ8TBF2 198 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms