RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 NTF3P20783 257 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 RPS20P60866 119 aaKnown RBP3.44□□□□□ -1.86
GDE1-204ENST00000569773 CKS1BP61024 79 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 CACNG7P62955 275 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 IFITM2Q01629 132 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 LYZL1Q6UWQ5 148 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 C9orf62Q8N4C0 152 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 MANBALQ9NQG1 85 aa3.44□□□□□ -1.86
GDE1-204ENST00000569773 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
GDE1-204ENST00000569773 A6NDN8 102 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 F2Z2F3 143 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 SMIM6P0DI80 62 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 RAB5CP51148 216 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 PRR3P79522 188 aaKnown RBP3.43□□□□□ -1.86
GDE1-204ENST00000569773 MEF2BQ02080 365 aaPredicted RBP3.43□□□□□ -1.86
GDE1-204ENST00000569773 COX6A2Q02221 97 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 PMVKQ15126 192 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 DPH3P1Q9H4G8 78 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 GNG13Q9P2W3 67 aa3.43□□□□□ -1.86
GDE1-204ENST00000569773 A0A096LNI7 61 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.42□□□□□ -1.86
GDE1-204ENST00000569773 TRAV26-2A0A0B4J265 109 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 A0A1B0GWB2 263 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 KANTRA0A1W2PQU2 76 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 E9PLD3 99 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 TRGC1P0CF51 173 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 PFN2P35080 140 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 RPS10P46783 165 aaKnown RBP3.42□□□□□ -1.86
GDE1-204ENST00000569773 GNG4P50150 75 aa3.42□□□□□ -1.86
GDE1-204ENST00000569773 FOXA3P55318 350 aaPredicted RBP3.42□□□□□ -1.86
GDE1-204ENST00000569773 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
GDE1-204ENST00000569773 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
GDE1-204ENST00000569773 NCR2O95944 276 aa3.41□□□□□ -1.86
GDE1-204ENST00000569773 BCL2P10415 239 aa3.41□□□□□ -1.86
GDE1-204ENST00000569773 RAB5BP61020 215 aa3.41□□□□□ -1.86
GDE1-204ENST00000569773 EIF5AP63241 154 aaKnown RBP3.41□□□□□ -1.86
GDE1-204ENST00000569773 CXCL6P80162 114 aa3.41□□□□□ -1.86
GDE1-204ENST00000569773 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
GDE1-204ENST00000569773 PKIGQ9Y2B9 76 aa3.41□□□□□ -1.86
GDE1-204ENST00000569773 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
GDE1-204ENST00000569773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.4□□□□□ -1.87
GDE1-204ENST00000569773 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 TRBV6-5A0A0K0K1A5 114 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 A0A0U1RQV1 116 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 IGKV2-29A2NJV5 120 aaPredicted RBP3.4□□□□□ -1.87
GDE1-204ENST00000569773 SDHAF1A6NFY7 115 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 UBE2L6O14933 153 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 S100A8P05109 93 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 FGF6P10767 208 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 ZNF25P17030 456 aaPredicted RBP3.4□□□□□ -1.87
GDE1-204ENST00000569773 BORCS7Q96B45 105 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 RNASE7Q9H1E1 156 aaKnown RBP3.4□□□□□ -1.87
GDE1-204ENST00000569773 RPP21Q9H633 154 aaKnown RBP3.4□□□□□ -1.87
GDE1-204ENST00000569773 MED9Q9NWA0 146 aa3.4□□□□□ -1.87
GDE1-204ENST00000569773 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 LINC00959A0A1B0GUT2 108 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 AKR1D1P51857 326 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 POLR2KP53803 58 aaKnown RBP3.39□□□□□ -1.87
GDE1-204ENST00000569773 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 C7orf33Q8WU49 177 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 LINC00526Q96FQ7 95 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
GDE1-204ENST00000569773 IGKV3OR2-268A0A0C4DH90 116 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 CCL25O15444 150 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 APCSP02743 223 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 XCL1P47992 114 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 EIF5AL1Q6IS14 154 aaKnown RBP3.38□□□□□ -1.87
GDE1-204ENST00000569773 TEX261Q6UWH6 196 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 TCTE3Q8IZS6 198 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 CDC42SE2Q9NRR3 84 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
GDE1-204ENST00000569773 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 TMEM250H0YL14 139 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 I3L3M4 83 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 BATFQ16520 125 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 AMMECR1LQ6DCA0 310 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 FA2HQ7L5A8 372 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 C14orf144Q96I85 54 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 CARD19Q96LW7 228 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 KIR2DL4Q99706 377 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 TMEM191AQ9H0A3 160 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 LINC00474Q9P2X8 69 aa3.37□□□□□ -1.87
GDE1-204ENST00000569773 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 A8MWL6 223 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 K7ERU9 68 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
GDE1-204ENST00000569773 ZNF664Q8N3J9 261 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms