RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	SMIM1	B2RUZ4	78 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	KRTAP5-9	P26371	169 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	DEFA1	P59665	94 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	RPS20	P60866	119 aa	Known RBP	3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	RPL37	P61927	97 aa	Known RBP	3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	CBLN2	Q8IUK8	224 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	CCDC32	Q9BV29	185 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	TIMM21	Q9BVV7	248 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	CNFN	Q9BYD5	112 aa		3.19	□□□□□ -1.9
BBS4-218	ENST00000569440	RAB19	A4D1S5	217 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	CCDC160	A6NGH7	325 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	C5orf52	A6NGY3	159 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	IFNA1	P01562	189 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	SMAGP	Q0VAQ4	97 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	KIAA1644	Q3SXP7	199 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	LCE1A	Q5T7P2	110 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	TRIQK	Q629K1	86 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	STOML3	Q8TAV4	291 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	PPP1R1C	Q8WVI7	109 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	TMEM126A	Q9H061	195 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	GEMIN7	Q9H840	131 aa	Known RBP	3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	ST20	Q9HBF5	79 aa		3.18	□□□□□ -1.9
BBS4-218	ENST00000569440	IGKV2-28	A0A075B6P5	120 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	CTXND1	A0A1B0GTU2	59 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	TMEM238	C9JI98	176 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440		M0R378	163 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	PLA2G10	O15496	165 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	IGKV2D-28	P01615	120 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	SSBP3-AS1	Q7Z2R9	100 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	OCC1	Q8TAD7	63 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	NUDT15	Q9NV35	164 aa		3.17	□□□□□ -1.9
BBS4-218	ENST00000569440	MPC2	O95563	127 aa		3.16	□□□□□ -1.9
BBS4-218	ENST00000569440	ATP6V1G2	O95670	118 aa		3.16	□□□□□ -1.9
BBS4-218	ENST00000569440	LINC01561	Q8N1V8	128 aa		3.16	□□□□□ -1.9
BBS4-218	ENST00000569440	HIGD2A	Q9BW72	106 aa		3.16	□□□□□ -1.9
BBS4-218	ENST00000569440	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.16	□□□□□ -1.9
BBS4-218	ENST00000569440	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	XKRY2	A2RUG3	117 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	SCO1	O75880	301 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	IGLV6-57	P01721	117 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	LGALS3	P17931	250 aa	Known RBP	3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	H2BFS	P57053	126 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	LINC00483	Q53H64	154 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	TMUB2	Q71RG4	321 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	LINC01551	Q86U37	167 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	KRTAP2-2	Q9BYT5	123 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	KRTAP2-1	Q9BYU5	128 aa		3.15	□□□□□ -1.91
BBS4-218	ENST00000569440	LYRM1	O43325	122 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	PET100	P0DJ07	73 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	FCER1G	P30273	86 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	S100A5	P33763	92 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	CKS1B	P61024	79 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	MRPS36	P82909	103 aa	Known RBP	3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	MOBP	Q13875	183 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	NKAPP1	Q8N9T2	125 aa		3.14	□□□□□ -1.91
BBS4-218	ENST00000569440	C20orf202	A1L168	122 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440	IFITM10	A6NMD0	228 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440	IL7	P13232	177 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440	HBB	P68871	147 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440	C6orf226	Q5I0X4	101 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440	SMIM15	Q7Z3B0	74 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440		Q8IZM0	81 aa		3.13	□□□□□ -1.91
BBS4-218	ENST00000569440		A4D1N5	150 aa		3.12	□□□□□ -1.91
BBS4-218	ENST00000569440	MAP1LC3B2	A6NCE7	125 aa		3.12	□□□□□ -1.91
BBS4-218	ENST00000569440		F8VRH5	84 aa		3.12	□□□□□ -1.91
BBS4-218	ENST00000569440	RPL35	P42766	123 aa	Known RBP	3.12	□□□□□ -1.91
BBS4-218	ENST00000569440	MAP1LC3B	Q9GZQ8	125 aa		3.12	□□□□□ -1.91
BBS4-218	ENST00000569440	SPANXA1	Q9NS26	97 aa		3.12	□□□□□ -1.91
BBS4-218	ENST00000569440	RPL39	P62891	51 aa	Known RBP	3.11	□□□□□ -1.91
BBS4-218	ENST00000569440	FAM231D	Q6ZW35	169 aa		3.11	□□□□□ -1.91
BBS4-218	ENST00000569440	SMIM29	Q86T20	159 aa		3.11	□□□□□ -1.91
BBS4-218	ENST00000569440	CENPW	Q5EE01	88 aa		3.1	□□□□□ -1.91
BBS4-218	ENST00000569440		Q6ZN92	141 aa		3.1	□□□□□ -1.91
BBS4-218	ENST00000569440	SMCR5	Q8TEV8	140 aa		3.1	□□□□□ -1.91
BBS4-218	ENST00000569440	SMIM12	Q96EX1	92 aa		3.1	□□□□□ -1.91
BBS4-218	ENST00000569440	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.1	□□□□□ -1.91
BBS4-218	ENST00000569440	TOMM7	Q9P0U1	55 aa		3.1	□□□□□ -1.91
BBS4-218	ENST00000569440	RAB4A	P20338	218 aa		3.09	□□□□□ -1.91
BBS4-218	ENST00000569440	AKR1C8P	Q5T2L2	129 aa		3.08	□□□□□ -1.92
BBS4-218	ENST00000569440	RPL7L1	Q6DKI1	246 aa	Known RBP	3.08	□□□□□ -1.92
BBS4-218	ENST00000569440	C11orf52	Q96A22	123 aa		3.08	□□□□□ -1.92
BBS4-218	ENST00000569440	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.08	□□□□□ -1.92
BBS4-218	ENST00000569440	FAM240B	A0A1B0GVZ2	78 aa		3.07	□□□□□ -1.92
BBS4-218	ENST00000569440	SMKR1	H3BMG3	65 aa		3.07	□□□□□ -1.92
BBS4-218	ENST00000569440	PFDN1	O60925	122 aa		3.07	□□□□□ -1.92
BBS4-218	ENST00000569440	CXCL5	P42830	114 aa		3.07	□□□□□ -1.92
BBS4-218	ENST00000569440	CCL20	P78556	96 aa		3.07	□□□□□ -1.92
BBS4-218	ENST00000569440	TMEM191A	Q9H0A3	160 aa		3.07	□□□□□ -1.92
BBS4-218	ENST00000569440	TRBV20OR9-2	A0A075B6H5	130 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	PPP1R2P9	O14990	202 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	PPP1R17	O96001	155 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	MT3	P25713	68 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440		Q8NDZ9	215 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	MBD3L1	Q8WWY6	194 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	C20orf166-AS1	Q96NR2	134 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	LIMD2	Q9BT23	127 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	BIN3	Q9NQY0	253 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	PYGO1	Q9Y3Y4	419 aa		3.06	□□□□□ -1.92
BBS4-218	ENST00000569440	IGLV4-3	A0A075B6K6	122 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	TCAP	O15273	167 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms