RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SMIM29Q86T20 159 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 SPTBN2O15020 2390 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 PROK1P58294 105 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 CACNA1GO43497 2377 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 TRAV22A0A0B4J277 110 aa5.04□□□□□ -1.6
CNOT1-216ENST00000569240 SPTBN5Q9NRC6 3674 aaKnown RBP5.03□□□□□ -1.6
CNOT1-216ENST00000569240 NCOR1O75376 2440 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.03□□□□□ -1.66e-7■■■■■ 29
CNOT1-216ENST00000569240 C11orf71Q6IPW1 123 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 SMCR5Q8TEV8 140 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 Q96MF0 132 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 IGHV4-30-2A0A087WSY4 118 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 TRBV7-4A0A0J9YYF1 115 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
CNOT1-216ENST00000569240 MOBPQ13875 183 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 GVQW2A0A096LPI5 108 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-216ENST00000569240 PLXNB1O43157 2135 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 PCDH15Q96QU1 1955 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 UNQ6190/PRO20217Q6UXQ8 127 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 FAM218AQ96MZ4 157 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 TM2D3Q9BRN9 247 aa5.02□□□□□ -1.61
CNOT1-216ENST00000569240 IGHV4-31P0DP07 118 aa5.01□□□□□ -1.61
CNOT1-216ENST00000569240 DEFB113Q30KQ7 82 aa5.01□□□□□ -1.61
CNOT1-216ENST00000569240 EDN2P20800 178 aa5.01□□□□□ -1.61
CNOT1-216ENST00000569240 GVINP1Q7Z2Y8 2422 aa5.01□□□□□ -1.61
CNOT1-216ENST00000569240 LINC00167Q96N53 147 aa5.01□□□□□ -1.61
CNOT1-216ENST00000569240 UQCR11O14957 56 aa5□□□□□ -1.61
CNOT1-216ENST00000569240 DEFB135Q30KP9 77 aa5□□□□□ -1.61
CNOT1-216ENST00000569240 TRAV10A0A0B4J240 114 aa5□□□□□ -1.61
CNOT1-216ENST00000569240 A0A0J9YWU9 116 aa5□□□□□ -1.61
CNOT1-216ENST00000569240 IGHV4-30-4P0DP06 118 aa5□□□□□ -1.61
CNOT1-216ENST00000569240 OBSCN-AS1Q96MR7 158 aa5□□□□□ -1.61
CNOT1-216ENST00000569240 COL5A1P20908 1838 aaPredicted RBP5□□□□□ -1.61
CNOT1-216ENST00000569240 ANKHD1Q8IWZ3 2542 aaKnown RBP4.99□□□□□ -1.61
CNOT1-216ENST00000569240 A0A087WSZ3 146 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 PRRC2AP48634 2157 aaKnown RBP4.99□□□□□ -1.61
CNOT1-216ENST00000569240 CACNA1BQ00975 2339 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 ACACAQ13085 2346 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 IGKV2-28A0A075B6P5 120 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 A8MUN3 132 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 IGKV2D-28P01615 120 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 BBC3Q96PG8 261 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-216ENST00000569240 ATRXP46100 2492 aa4.99□□□□□ -1.61
CNOT1-216ENST00000569240 ADORA2A-AS1P86434 159 aa4.98□□□□□ -1.61
CNOT1-216ENST00000569240 DMDP11532 3685 aa4.98□□□□□ -1.61
CNOT1-216ENST00000569240 C11orf45Q8TAV5 145 aa4.98□□□□□ -1.61
CNOT1-216ENST00000569240 MUC22E2RYF6 1773 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-216ENST00000569240 Q9BRP9 147 aa4.98□□□□□ -1.61
CNOT1-216ENST00000569240 ARHGAP32A7KAX9 2087 aa4.98□□□□□ -1.61
CNOT1-216ENST00000569240 CNOT1A5YKK6 2376 aaKnown RBP4.97□□□□□ -1.61
CNOT1-216ENST00000569240 KIAA1549Q9HCM3 1950 aa4.97□□□□□ -1.61
CNOT1-216ENST00000569240 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
CNOT1-216ENST00000569240 CPAMD8Q8IZJ3 1885 aa4.97□□□□□ -1.61
CNOT1-216ENST00000569240 IGLV4-60A0A075B6I1 120 aa4.97□□□□□ -1.61
CNOT1-216ENST00000569240 Q6ZRU5 148 aa4.97□□□□□ -1.61
CNOT1-216ENST00000569240 C6orf48Q9UBA6 75 aa4.97□□□□□ -1.61
CNOT1-216ENST00000569240 NOTCH4Q99466 2003 aa4.96□□□□□ -1.61
CNOT1-216ENST00000569240 C7orf33Q8WU49 177 aa4.96□□□□□ -1.61
CNOT1-216ENST00000569240 PCOTHQ58A44 107 aa4.96□□□□□ -1.62
CNOT1-216ENST00000569240 OXLD1Q5BKU9 147 aa4.96□□□□□ -1.62
CNOT1-216ENST00000569240 LYPD5Q6UWN5 251 aa4.96□□□□□ -1.62
CNOT1-216ENST00000569240 COA5Q86WW8 74 aa4.96□□□□□ -1.62
CNOT1-216ENST00000569240 IGLV6-57P01721 117 aa4.96□□□□□ -1.62
CNOT1-216ENST00000569240 ODF3L2Q3SX64 289 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-216ENST00000569240 DEFB131BA0A096LNP1 70 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 LOC100131303A0A0U1RQF7 123 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 LINC01006Q8NI28 216 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-216ENST00000569240 AVPP01185 164 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 NAV3Q8IVL0 2385 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 H3BNG1 76 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 LTBP2Q14767 1821 aa4.95□□□□□ -1.62
CNOT1-216ENST00000569240 IGKV2-24A0A0C4DH68 120 aa4.94□□□□□ -1.62
CNOT1-216ENST00000569240 DNAJC9-AS1A6NH13 148 aa4.94□□□□□ -1.62
CNOT1-216ENST00000569240 KIAA0087Q14695 138 aa4.94□□□□□ -1.62
CNOT1-216ENST00000569240 RPL37AP61513 92 aaKnown RBP4.94□□□□□ -1.62
CNOT1-216ENST00000569240 GRNP28799 593 aaKnown RBP4.93□□□□□ -1.62
CNOT1-216ENST00000569240 Q5XG85 94 aa4.93□□□□□ -1.62
CNOT1-216ENST00000569240 A8MWP4 228 aa4.93□□□□□ -1.62
CNOT1-216ENST00000569240 IGLV1-51P01701 117 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 Q6ZRX8 168 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 ADAMTS20P59510 1910 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 Q75L30 129 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 Q6ZRP5 223 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 FAM229AH3BQW9 127 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 Q8NA96 180 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 A8MTW9 85 aa4.92□□□□□ -1.62
CNOT1-216ENST00000569240 PRR3P79522 188 aaKnown RBP4.92□□□□□ -1.62
CNOT1-216ENST00000569240 EXPH5Q8NEV8 1989 aa4.91□□□□□ -1.62
CNOT1-216ENST00000569240 Q6ZSN1 163 aa4.9□□□□□ -1.62
CNOT1-216ENST00000569240 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.62
CNOT1-216ENST00000569240 MKI67P46013 3256 aaKnown RBP4.9□□□□□ -1.63
CNOT1-216ENST00000569240 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
CNOT1-216ENST00000569240 DNAH12Q6ZR08 3092 aa4.89□□□□□ -1.63
CNOT1-216ENST00000569240 A0A096LNI7 61 aa4.89□□□□□ -1.63
CNOT1-216ENST00000569240 A0A1W2PNU3 283 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-216ENST00000569240 WNK1Q9H4A3 2382 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms