RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
SYNGR3-205ENST00000568896 PLAC8Q9NZF1 115 aa11.58□□□□□ -0.56
SYNGR3-205ENST00000568896 NDUFA6P56556 154 aa11.57□□□□□ -0.56
SYNGR3-205ENST00000568896 C2orf82Q6UX34 121 aa11.57□□□□□ -0.56
SYNGR3-205ENST00000568896 PACRGQ96M98 296 aaPredicted RBP11.57□□□□□ -0.56
SYNGR3-205ENST00000568896 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
SYNGR3-205ENST00000568896 PTTG1IPP53801 180 aa11.56□□□□□ -0.56
SYNGR3-205ENST00000568896 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
SYNGR3-205ENST00000568896 C6orf48Q9UBA6 75 aa11.56□□□□□ -0.56
SYNGR3-205ENST00000568896 SMIM1B2RUZ4 78 aa11.55□□□□□ -0.56
SYNGR3-205ENST00000568896 HSBP1O75506 76 aa11.55□□□□□ -0.56
SYNGR3-205ENST00000568896 PRSS2P07478 247 aa11.55□□□□□ -0.56
SYNGR3-205ENST00000568896 GAGE2BQ13066 116 aa11.55□□□□□ -0.56
SYNGR3-205ENST00000568896 Q8IZM0 81 aa11.55□□□□□ -0.56
SYNGR3-205ENST00000568896 STPG4Q8N801 248 aa11.55□□□□□ -0.56
SYNGR3-205ENST00000568896 SERF1AO75920 110 aa11.54□□□□□ -0.56
SYNGR3-205ENST00000568896 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
SYNGR3-205ENST00000568896 HNRNPA3P51991 378 aaKnown RBP11.54□□□□□ -0.56
SYNGR3-205ENST00000568896 LINC00310P59036 64 aa11.54□□□□□ -0.56
SYNGR3-205ENST00000568896 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
SYNGR3-205ENST00000568896 PLA2G2DQ9UNK4 145 aa11.54□□□□□ -0.56
SYNGR3-205ENST00000568896 FAM19A2Q8N3H0 131 aa11.53□□□□□ -0.56
SYNGR3-205ENST00000568896 TRBV30A0A0K0K1B3 111 aa11.52□□□□□ -0.57
SYNGR3-205ENST00000568896 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.57
SYNGR3-205ENST00000568896 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
SYNGR3-205ENST00000568896 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
SYNGR3-205ENST00000568896 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
SYNGR3-205ENST00000568896 CKS1BP61024 79 aa11.51□□□□□ -0.57
SYNGR3-205ENST00000568896 IFI27L1Q96BM0 104 aa11.51□□□□□ -0.57
SYNGR3-205ENST00000568896 ZNF22P17026 224 aaPredicted RBP11.5□□□□□ -0.57
SYNGR3-205ENST00000568896 C11orf86A6NJI1 115 aa11.49□□□□□ -0.57
SYNGR3-205ENST00000568896 H3BRM9 83 aa11.49□□□□□ -0.57
SYNGR3-205ENST00000568896 Q6ZRP5 223 aa11.49□□□□□ -0.57
SYNGR3-205ENST00000568896 COX7B2Q8TF08 81 aa11.49□□□□□ -0.57
SYNGR3-205ENST00000568896 NUPR1O60356 82 aa11.48□□□□□ -0.57
SYNGR3-205ENST00000568896 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
SYNGR3-205ENST00000568896 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
SYNGR3-205ENST00000568896 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
SYNGR3-205ENST00000568896 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
SYNGR3-205ENST00000568896 F8VRH5 84 aa11.47□□□□□ -0.57
SYNGR3-205ENST00000568896 CXCL5P42830 114 aa11.47□□□□□ -0.57
SYNGR3-205ENST00000568896 NDUFC2-KCTD14E9PQ53 114 aa11.46□□□□□ -0.57
SYNGR3-205ENST00000568896 C7orf33Q8WU49 177 aa11.46□□□□□ -0.57
SYNGR3-205ENST00000568896 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 LEPROTL1O95214 131 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
SYNGR3-205ENST00000568896 TMEM170BQ5T4T1 132 aa11.44□□□□□ -0.58
SYNGR3-205ENST00000568896 TNXBP22105 4242 aa11.42□□□□□ -0.58
SYNGR3-205ENST00000568896 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
SYNGR3-205ENST00000568896 H0Y8G0 127 aa11.41□□□□□ -0.58
SYNGR3-205ENST00000568896 FABP4P15090 132 aa11.41□□□□□ -0.58
SYNGR3-205ENST00000568896 S100A1P23297 94 aa11.41□□□□□ -0.58
SYNGR3-205ENST00000568896 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
SYNGR3-205ENST00000568896 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
SYNGR3-205ENST00000568896 ATP6V1G1O75348 118 aa11.4□□□□□ -0.58
SYNGR3-205ENST00000568896 ODF1Q14990 250 aa11.4□□□□□ -0.58
SYNGR3-205ENST00000568896 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
SYNGR3-205ENST00000568896 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
SYNGR3-205ENST00000568896 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
SYNGR3-205ENST00000568896 FAM19A5Q7Z5A7 132 aaPredicted RBP11.38□□□□□ -0.59
SYNGR3-205ENST00000568896 KRTAP7-1Q8IUC3 87 aa11.38□□□□□ -0.59
SYNGR3-205ENST00000568896 PHF5AQ7RTV0 110 aaKnown RBP11.37□□□□□ -0.59
SYNGR3-205ENST00000568896 XAGE1AQ9HD64 81 aa11.36□□□□□ -0.59
SYNGR3-205ENST00000568896 LRP2P98164 4655 aa11.36□□□□□ -0.59
SYNGR3-205ENST00000568896 M0QXV9 152 aa11.33□□□□□ -0.6
SYNGR3-205ENST00000568896 MAP1LC3CQ9BXW4 147 aa11.33□□□□□ -0.6
SYNGR3-205ENST00000568896 PLNP26678 52 aa11.32□□□□□ -0.6
SYNGR3-205ENST00000568896 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
SYNGR3-205ENST00000568896 SFTA2Q6UW10 78 aa11.32□□□□□ -0.6
SYNGR3-205ENST00000568896 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
SYNGR3-205ENST00000568896 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
SYNGR3-205ENST00000568896 DPM2O94777 84 aa11.31□□□□□ -0.6
SYNGR3-205ENST00000568896 ERG28Q9UKR5 140 aa11.31□□□□□ -0.6
SYNGR3-205ENST00000568896 RNF213Q63HN8 5207 aa11.3□□□□□ -0.6
SYNGR3-205ENST00000568896 PFN2P35080 140 aa11.3□□□□□ -0.6
SYNGR3-205ENST00000568896 PSORS1C2Q9UIG4 136 aa11.3□□□□□ -0.6
SYNGR3-205ENST00000568896 KRTAP11-1Q8IUC1 163 aa11.29□□□□□ -0.6
SYNGR3-205ENST00000568896 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
SYNGR3-205ENST00000568896 IGKCP01834 107 aa11.28□□□□□ -0.6
SYNGR3-205ENST00000568896 COX17Q14061 63 aa11.27□□□□□ -0.61
SYNGR3-205ENST00000568896 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
SYNGR3-205ENST00000568896 TSPEAR-AS2P59090 65 aa11.25□□□□□ -0.61
SYNGR3-205ENST00000568896 UBE2BP63146 152 aa11.25□□□□□ -0.61
SYNGR3-205ENST00000568896 C1orf137Q5JT78 98 aa11.25□□□□□ -0.61
SYNGR3-205ENST00000568896 LEPROTO15243 131 aa11.24□□□□□ -0.61
SYNGR3-205ENST00000568896 HERVK_113P61574 105 aa11.24□□□□□ -0.61
SYNGR3-205ENST00000568896 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
SYNGR3-205ENST00000568896 TP73-AS1Q9UF72 201 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms