RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 KIAA0087Q14695 138 aa6.47□□□□□ -1.37
UBR1-207ENST00000568782 PMVKQ15126 192 aa6.47□□□□□ -1.37
UBR1-207ENST00000568782 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
UBR1-207ENST00000568782 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
UBR1-207ENST00000568782 CDKN2A-AS1Q9UH64 79 aa6.47□□□□□ -1.37
UBR1-207ENST00000568782 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
UBR1-207ENST00000568782 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
UBR1-207ENST00000568782 LINC00614P0C842 121 aa6.46□□□□□ -1.38
UBR1-207ENST00000568782 UBE2BP63146 152 aa6.46□□□□□ -1.38
UBR1-207ENST00000568782 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
UBR1-207ENST00000568782 F8VRH5 84 aa6.45□□□□□ -1.38
UBR1-207ENST00000568782 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
UBR1-207ENST00000568782 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
UBR1-207ENST00000568782 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
UBR1-207ENST00000568782 CST9LQ9H4G1 147 aa6.45□□□□□ -1.38
UBR1-207ENST00000568782 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
UBR1-207ENST00000568782 ATP5LO75964 103 aa6.44□□□□□ -1.38
UBR1-207ENST00000568782 HBDP02042 147 aa6.44□□□□□ -1.38
UBR1-207ENST00000568782 COX7B2Q8TF08 81 aa6.44□□□□□ -1.38
UBR1-207ENST00000568782 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
UBR1-207ENST00000568782 M0QXV9 152 aa6.43□□□□□ -1.38
UBR1-207ENST00000568782 C18orf32Q8TCD1 76 aa6.43□□□□□ -1.38
UBR1-207ENST00000568782 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
UBR1-207ENST00000568782 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
UBR1-207ENST00000568782 LINC01600Q96MT4 127 aa6.42□□□□□ -1.38
UBR1-207ENST00000568782 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
UBR1-207ENST00000568782 IGLV5-45A0A087WSX0 123 aa6.41□□□□□ -1.38
UBR1-207ENST00000568782 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
UBR1-207ENST00000568782 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
UBR1-207ENST00000568782 DIRC1Q969H9 104 aa6.41□□□□□ -1.38
UBR1-207ENST00000568782 SRSF9Q13242 221 aaKnown RBP eCLIP6.4□□□□□ -1.38
UBR1-207ENST00000568782 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
UBR1-207ENST00000568782 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
UBR1-207ENST00000568782 C9orf129Q5T035 196 aaKnown RBP6.39□□□□□ -1.39
UBR1-207ENST00000568782 TMEM170BQ5T4T1 132 aa6.39□□□□□ -1.39
UBR1-207ENST00000568782 SFTA2Q6UW10 78 aa6.39□□□□□ -1.39
UBR1-207ENST00000568782 CHCHD1Q96BP2 118 aaKnown RBP6.39□□□□□ -1.39
UBR1-207ENST00000568782 XAGE1AQ9HD64 81 aa6.39□□□□□ -1.39
UBR1-207ENST00000568782 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
UBR1-207ENST00000568782 PMCHL1Q16048 86 aa6.38□□□□□ -1.39
UBR1-207ENST00000568782 HERC1Q15751 4861 aa6.37□□□□□ -1.39
UBR1-207ENST00000568782 NUPR1O60356 82 aa6.37□□□□□ -1.39
UBR1-207ENST00000568782 HSBP1O75506 76 aa6.37□□□□□ -1.39
UBR1-207ENST00000568782 NKAPP1Q8N9T2 125 aa6.37□□□□□ -1.39
UBR1-207ENST00000568782 C22orf24Q9Y442 160 aa6.37□□□□□ -1.39
UBR1-207ENST00000568782 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
UBR1-207ENST00000568782 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
UBR1-207ENST00000568782 TP73-AS1Q9UF72 201 aa6.36□□□□□ -1.39
UBR1-207ENST00000568782 CHTOPQ9Y3Y2 248 aaKnown RBP6.36□□□□□ -1.39
UBR1-207ENST00000568782 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 A0A096LNJ9 63 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 ATP6V1G1O75348 118 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
UBR1-207ENST00000568782 PFN2P35080 140 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 COX17Q14061 63 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 ODF1Q14990 250 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 URB1-AS1Q96HZ7 61 aa6.35□□□□□ -1.39
UBR1-207ENST00000568782 H0Y9J4 135 aa6.34□□□□□ -1.39
UBR1-207ENST00000568782 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
UBR1-207ENST00000568782 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
UBR1-207ENST00000568782 IGLV5-39A0A0G2JS06 123 aa6.33□□□□□ -1.4
UBR1-207ENST00000568782 C11orf86A6NJI1 115 aa6.33□□□□□ -1.4
UBR1-207ENST00000568782 RPL24P83731 157 aaKnown RBP6.33□□□□□ -1.4
UBR1-207ENST00000568782 CBLN2Q8IUK8 224 aa6.33□□□□□ -1.4
UBR1-207ENST00000568782 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
UBR1-207ENST00000568782 ZNF861PO60384 105 aa6.32□□□□□ -1.4
UBR1-207ENST00000568782 TRGC2P03986 189 aa6.32□□□□□ -1.4
UBR1-207ENST00000568782 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
UBR1-207ENST00000568782 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
UBR1-207ENST00000568782 KRTAP7-1Q8IUC3 87 aa6.32□□□□□ -1.4
UBR1-207ENST00000568782 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
UBR1-207ENST00000568782 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
UBR1-207ENST00000568782 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 LINC00587B1AMM8 73 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 H0Y8G0 127 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 RPL13AP40429 203 aaKnown RBP6.31□□□□□ -1.4
UBR1-207ENST00000568782 LINC00158P58513 81 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 SLC7A5P1Q8MH63 180 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 LINC00167Q96N53 147 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
UBR1-207ENST00000568782 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
UBR1-207ENST00000568782 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
UBR1-207ENST00000568782 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
UBR1-207ENST00000568782 UBE2AP49459 152 aa6.3□□□□□ -1.4
UBR1-207ENST00000568782 KRTAP11-1Q8IUC1 163 aa6.3□□□□□ -1.4
UBR1-207ENST00000568782 FAM19A2Q8N3H0 131 aa6.3□□□□□ -1.4
UBR1-207ENST00000568782 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
UBR1-207ENST00000568782 BCE1O60756 84 aa6.29□□□□□ -1.4
UBR1-207ENST00000568782 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
UBR1-207ENST00000568782 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
UBR1-207ENST00000568782 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
UBR1-207ENST00000568782 HERVK_113P61574 105 aa6.28□□□□□ -1.4
UBR1-207ENST00000568782 HERV-K104P63124 156 aa6.28□□□□□ -1.4
UBR1-207ENST00000568782 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
UBR1-207ENST00000568782 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
UBR1-207ENST00000568782 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
UBR1-207ENST00000568782 SERF1AO75920 110 aa6.27□□□□□ -1.41
UBR1-207ENST00000568782 PLNP26678 52 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 333.8 ms