RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 UBE2D1P51668 147 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 RAB4BP61018 213 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 SAPCD1Q5SSQ6 148 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 FER1L6-AS1Q8NA97 138 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 STOML3Q8TAV4 291 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 AQP10Q96PS8 301 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 LINC00474Q9P2X8 69 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 EPDR1Q9UM22 224 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 TRAPPC1Q9Y5R8 145 aa3.45□□□□□ -1.86
HERPUD1-214ENST00000568651 GZMBP10144 247 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 S100A5P33763 92 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 TMBIM6P55061 237 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 IL15RAQ13261 267 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 IQCJQ1A5X6 159 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 TMEM97Q5BJF2 176 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 OR10AG1Q8NH19 301 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 SMIM12Q96EX1 92 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 CARD19Q96LW7 228 aa3.44□□□□□ -1.86
HERPUD1-214ENST00000568651 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 TRAV1-1A0A0B4J248 108 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 UBE2L6O14933 153 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 MGPP08493 103 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 BCL2P10415 239 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 GCHFRP30047 84 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 NKX2-5P52952 324 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 MP68P56378 58 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 EIF5AP63241 154 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 C9orf116Q5BN46 136 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 Q86TA4 180 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 RETNLBQ9BQ08 111 aa3.43□□□□□ -1.86
HERPUD1-214ENST00000568651 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
HERPUD1-214ENST00000568651 XCL1P47992 114 aa3.42□□□□□ -1.86
HERPUD1-214ENST00000568651 CDC34P49427 236 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-214ENST00000568651 DEFA1P59665 94 aa3.42□□□□□ -1.86
HERPUD1-214ENST00000568651 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
HERPUD1-214ENST00000568651 ZNF471Q9BX82 626 aaPredicted RBP3.42□□□□□ -1.86
HERPUD1-214ENST00000568651 SMIM17P0DL12 118 aa3.41□□□□□ -1.86
HERPUD1-214ENST00000568651 SPANXN1Q5VSR9 72 aa3.41□□□□□ -1.86
HERPUD1-214ENST00000568651 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
HERPUD1-214ENST00000568651 HSPB11Q9Y547 144 aa3.41□□□□□ -1.86
HERPUD1-214ENST00000568651 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 LOC107984640A0A0U1RRK4 108 aa3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 IGKV2-29A2NJV5 120 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 CCDC160A6NGH7 325 aa3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 PLA2G10O15496 165 aa3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 C1orf64Q8NEQ6 169 aa3.4□□□□□ -1.87
HERPUD1-214ENST00000568651 IGHV1-58A0A0C4DH39 117 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 H3BQ85 93 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 M0QY20 66 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 CCL25O15444 150 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 LYRM1O43325 122 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 IL7P13232 177 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 AMMECR1LQ6DCA0 310 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 TMEM167BQ9NRX6 74 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 PKIGQ9Y2B9 76 aa3.39□□□□□ -1.87
HERPUD1-214ENST00000568651 LTAP01374 205 aa3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 UBE2G1P62253 170 aa3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 MEF2BQ02080 365 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 FAM19A5Q7Z5A7 132 aaPredicted RBP3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 PPP1R1CQ8WVI7 109 aa3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 AP1S3Q96PC3 154 aa3.38□□□□□ -1.87
HERPUD1-214ENST00000568651 A0A1W2PRE2 83 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 A8MWP4 228 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 APOMO95445 188 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 FGF6P10767 208 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 UBE2BP63146 152 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 CENPWQ5EE01 88 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 EIF5AL1Q6IS14 154 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 ZFP30Q9Y2G7 519 aa3.37□□□□□ -1.87
HERPUD1-214ENST00000568651 LINC00959A0A1B0GUT2 108 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 MPC2O95563 127 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 AKR1C3P42330 323 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 RASL11AQ6T310 242 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 NUP35Q8NFH5 326 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 HIST1H2BAQ96A08 127 aa3.36□□□□□ -1.87
HERPUD1-214ENST00000568651 CRYGAP11844 174 aa3.35□□□□□ -1.87
HERPUD1-214ENST00000568651 H2BFSP57053 126 aa3.35□□□□□ -1.87
HERPUD1-214ENST00000568651 C4orf26Q17RF5 130 aa3.35□□□□□ -1.87
HERPUD1-214ENST00000568651 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
HERPUD1-214ENST00000568651 CARHSP1Q9Y2V2 147 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-214ENST00000568651 INMT-MINDY4F8WBC2 141 aa3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 SS18Q15532 418 aa3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 C5orf38Q86SI9 138 aa3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 RPL39LQ96EH5 51 aaKnown RBP3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 BTF3L4Q96K17 158 aa3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 PACRGQ96M98 296 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
HERPUD1-214ENST00000568651 CXCL1P09341 107 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 TPRXLQ17RH7 258 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 BAGE2Q86Y30 109 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 OR2D3Q8NGH3 330 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 TSKUQ8WUA8 353 aa3.33□□□□□ -1.88
HERPUD1-214ENST00000568651 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
HERPUD1-214ENST00000568651 A0A1B0GV50 99 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms