RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 PPDPFQ9H3Y8 114 aa6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
GTF3C1-209ENST00000568569 F8VRH5 84 aa6.79□□□□□ -1.32
GTF3C1-209ENST00000568569 PPBPP02775 128 aa6.79□□□□□ -1.32
GTF3C1-209ENST00000568569 SRSF3P84103 164 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-209ENST00000568569 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
GTF3C1-209ENST00000568569 C9JQL5 133 aa6.78□□□□□ -1.32
GTF3C1-209ENST00000568569 S100A8P05109 93 aa6.78□□□□□ -1.32
GTF3C1-209ENST00000568569 GAGE10A6NGK3 116 aa6.77□□□□□ -1.33
GTF3C1-209ENST00000568569 SRP19P09132 144 aaKnown RBP6.77□□□□□ -1.33
GTF3C1-209ENST00000568569 ORMDL3Q8N138 153 aa6.77□□□□□ -1.33
GTF3C1-209ENST00000568569 CXCL5P42830 114 aa6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 RPL23P62829 140 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 ZC2HC1BQ5TFG8 222 aa6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 MRPL54Q6P161 138 aaKnown RBP6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 AMELXQ99217 191 aa6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 VCX2Q9H322 139 aa6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 CYSLTR1Q9Y271 337 aa6.76□□□□□ -1.33
GTF3C1-209ENST00000568569 A0A1B0GXF2 115 aa6.75□□□□□ -1.33
GTF3C1-209ENST00000568569 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-209ENST00000568569 ADIRFQ15847 76 aa6.75□□□□□ -1.33
GTF3C1-209ENST00000568569 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 NPSP0C0P6 89 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 HERVK_113P63121 156 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 SEC11AP67812 179 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 TMEM136Q6ZRR5 245 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 FAM19A3Q7Z5A8 133 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 LINC00337Q8N6G1 96 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
GTF3C1-209ENST00000568569 SPAG11AQ6PDA7 123 aa6.73□□□□□ -1.33
GTF3C1-209ENST00000568569 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
GTF3C1-209ENST00000568569 IGKV2-28A0A075B6P5 120 aa6.72□□□□□ -1.33
GTF3C1-209ENST00000568569 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
GTF3C1-209ENST00000568569 IGKV2D-28P01615 120 aa6.72□□□□□ -1.33
GTF3C1-209ENST00000568569 PRLHP81277 87 aa6.72□□□□□ -1.33
GTF3C1-209ENST00000568569 MAP1LC3AQ9H492 121 aa6.72□□□□□ -1.33
GTF3C1-209ENST00000568569 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
GTF3C1-209ENST00000568569 IGIPA6NJ69 53 aa6.71□□□□□ -1.34
GTF3C1-209ENST00000568569 PRSS47A8MTI9 375 aa6.71□□□□□ -1.34
GTF3C1-209ENST00000568569 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.34
GTF3C1-209ENST00000568569 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.34
GTF3C1-209ENST00000568569 IFITM2Q01629 132 aa6.7□□□□□ -1.34
GTF3C1-209ENST00000568569 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
GTF3C1-209ENST00000568569 C3orf22Q8N5N4 141 aa6.7□□□□□ -1.34
GTF3C1-209ENST00000568569 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 ORMDL2Q53FV1 153 aa6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 ATP5L2Q7Z4Y8 100 aa6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 Q8N8P6 123 aa6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
GTF3C1-209ENST00000568569 K7EMI3 77 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 SCO1O75880 301 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 RAB5BP61020 215 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 PDZD11Q5EBL8 140 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 COX7B2Q8TF08 81 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 PLEKHB2Q96CS7 222 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
GTF3C1-209ENST00000568569 PEA15Q15121 130 aa6.67□□□□□ -1.34
GTF3C1-209ENST00000568569 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
GTF3C1-209ENST00000568569 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
GTF3C1-209ENST00000568569 TMEM238C9JI98 176 aa6.66□□□□□ -1.34
GTF3C1-209ENST00000568569 CBLN2Q8IUK8 224 aa6.66□□□□□ -1.34
GTF3C1-209ENST00000568569 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
GTF3C1-209ENST00000568569 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
GTF3C1-209ENST00000568569 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
GTF3C1-209ENST00000568569 M0R378 163 aa6.65□□□□□ -1.34
GTF3C1-209ENST00000568569 ADCYAP1P18509 176 aa6.65□□□□□ -1.34
GTF3C1-209ENST00000568569 G0S2P27469 103 aa6.65□□□□□ -1.34
GTF3C1-209ENST00000568569 CLLU1Q5K131 121 aa6.65□□□□□ -1.34
GTF3C1-209ENST00000568569 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
GTF3C1-209ENST00000568569 ATP5LO75964 103 aa6.64□□□□□ -1.35
GTF3C1-209ENST00000568569 VPREB1P12018 145 aa6.64□□□□□ -1.35
GTF3C1-209ENST00000568569 HIGD2AQ9BW72 106 aa6.64□□□□□ -1.35
GTF3C1-209ENST00000568569 NXT2Q9NPJ8 142 aaKnown RBP6.64□□□□□ -1.35
GTF3C1-209ENST00000568569 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
GTF3C1-209ENST00000568569 TOMM6Q96B49 74 aa6.63□□□□□ -1.35
GTF3C1-209ENST00000568569 SPRR4Q96PI1 79 aa6.63□□□□□ -1.35
GTF3C1-209ENST00000568569 SPINK1P00995 79 aa6.62□□□□□ -1.35
GTF3C1-209ENST00000568569 SPINK8P0C7L1 97 aa6.62□□□□□ -1.35
GTF3C1-209ENST00000568569 RAB14P61106 215 aa6.62□□□□□ -1.35
GTF3C1-209ENST00000568569 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
GTF3C1-209ENST00000568569 Q8NBF4 154 aa6.62□□□□□ -1.35
GTF3C1-209ENST00000568569 PFN2P35080 140 aa6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 ERASQ7Z444 233 aa6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 COMMD7Q86VX2 200 aa6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 DAND5Q8N907 189 aa6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-209ENST00000568569 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
GTF3C1-209ENST00000568569 SCGB3A1Q96QR1 104 aa6.6□□□□□ -1.35
GTF3C1-209ENST00000568569 MRPL18Q9H0U6 180 aaKnown RBP6.59□□□□□ -1.35
GTF3C1-209ENST00000568569 H3BRM9 83 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms