RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
GTF3C1-207ENST00000567806 PDZD11Q5EBL8 140 aa11.68□□□□□ -0.54
GTF3C1-207ENST00000567806 AMELXQ99217 191 aa11.68□□□□□ -0.54
GTF3C1-207ENST00000567806 LRP2P98164 4655 aa11.67□□□□□ -0.54
GTF3C1-207ENST00000567806 ODF1Q14990 250 aa11.67□□□□□ -0.54
GTF3C1-207ENST00000567806 PMVKQ15126 192 aa11.67□□□□□ -0.54
GTF3C1-207ENST00000567806 A0A096LNJ9 63 aa11.65□□□□□ -0.54
GTF3C1-207ENST00000567806 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.54
GTF3C1-207ENST00000567806 NDUFA6P56556 154 aa11.65□□□□□ -0.54
GTF3C1-207ENST00000567806 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
GTF3C1-207ENST00000567806 IFI27L1Q96BM0 104 aa11.64□□□□□ -0.55
GTF3C1-207ENST00000567806 APOMO95445 188 aa11.63□□□□□ -0.55
GTF3C1-207ENST00000567806 HERVK_113P63121 156 aa11.63□□□□□ -0.55
GTF3C1-207ENST00000567806 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
GTF3C1-207ENST00000567806 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-207ENST00000567806 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
GTF3C1-207ENST00000567806 FAM19A2Q8N3H0 131 aa11.63□□□□□ -0.55
GTF3C1-207ENST00000567806 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 UBE2D1P51668 147 aa11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 C2orf48Q96LS8 159 aa11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 OPRPNQ99935 248 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 GEMIN7Q9H840 131 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-207ENST00000567806 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
GTF3C1-207ENST00000567806 LINC00310P59036 64 aa11.61□□□□□ -0.55
GTF3C1-207ENST00000567806 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
GTF3C1-207ENST00000567806 FAM104AQ969W3 186 aa11.61□□□□□ -0.55
GTF3C1-207ENST00000567806 MAP1LC3CQ9BXW4 147 aa11.61□□□□□ -0.55
GTF3C1-207ENST00000567806 S100A2P29034 98 aa11.6□□□□□ -0.55
GTF3C1-207ENST00000567806 AKR1D1P51857 326 aa11.6□□□□□ -0.55
GTF3C1-207ENST00000567806 C9orf116Q5BN46 136 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-207ENST00000567806 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-207ENST00000567806 LINC00173Q6ZV60 143 aa11.59□□□□□ -0.55
GTF3C1-207ENST00000567806 RNF213Q63HN8 5207 aa11.58□□□□□ -0.56
GTF3C1-207ENST00000567806 TINCRA0A1B0GVN0 87 aa11.58□□□□□ -0.56
GTF3C1-207ENST00000567806 SPAG11BQ08648 103 aa11.58□□□□□ -0.56
GTF3C1-207ENST00000567806 LINC00242Q5T6M2 205 aa11.58□□□□□ -0.56
GTF3C1-207ENST00000567806 PSORS1C2Q9UIG4 136 aa11.58□□□□□ -0.56
GTF3C1-207ENST00000567806 H3BRM9 83 aa11.57□□□□□ -0.56
GTF3C1-207ENST00000567806 NUPR1O60356 82 aa11.57□□□□□ -0.56
GTF3C1-207ENST00000567806 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
GTF3C1-207ENST00000567806 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
GTF3C1-207ENST00000567806 FABP4P15090 132 aa11.56□□□□□ -0.56
GTF3C1-207ENST00000567806 A0A087WZ39 114 aa11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 F8VRH5 84 aa11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 F8WDY8 70 aa11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 C1orf137Q5JT78 98 aa11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 PHF5AQ7RTV0 110 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 OR10D4PQ8NGN7 298 aa11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 CHTOPQ9Y3Y2 248 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-207ENST00000567806 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
GTF3C1-207ENST00000567806 PLNP26678 52 aa11.53□□□□□ -0.56
GTF3C1-207ENST00000567806 ORAOV1Q8WV07 137 aa11.53□□□□□ -0.56
GTF3C1-207ENST00000567806 IGLV5-45A0A087WSX0 123 aa11.52□□□□□ -0.57
GTF3C1-207ENST00000567806 C20orf202A1L168 122 aa11.52□□□□□ -0.57
GTF3C1-207ENST00000567806 PET117Q6UWS5 81 aa11.52□□□□□ -0.57
GTF3C1-207ENST00000567806 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.57
GTF3C1-207ENST00000567806 MRPL35Q9NZE8 188 aaKnown RBP11.52□□□□□ -0.57
GTF3C1-207ENST00000567806 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
GTF3C1-207ENST00000567806 NDUFA1O15239 70 aa11.5□□□□□ -0.57
GTF3C1-207ENST00000567806 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
GTF3C1-207ENST00000567806 HIST3H2BBQ8N257 126 aa11.5□□□□□ -0.57
GTF3C1-207ENST00000567806 DIRC1Q969H9 104 aa11.5□□□□□ -0.57
GTF3C1-207ENST00000567806 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
GTF3C1-207ENST00000567806 H0Y8G0 127 aa11.48□□□□□ -0.57
GTF3C1-207ENST00000567806 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
GTF3C1-207ENST00000567806 PRSS2P07478 247 aa11.48□□□□□ -0.57
GTF3C1-207ENST00000567806 SNRPEP62304 92 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-207ENST00000567806 CDKN2A-AS1Q9UH64 79 aa11.48□□□□□ -0.57
GTF3C1-207ENST00000567806 DPM2O94777 84 aa11.47□□□□□ -0.57
GTF3C1-207ENST00000567806 CXCL5P42830 114 aa11.47□□□□□ -0.57
GTF3C1-207ENST00000567806 TMEM170BQ5T4T1 132 aa11.47□□□□□ -0.57
GTF3C1-207ENST00000567806 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
GTF3C1-207ENST00000567806 UNQ6190/PRO20217Q6UXQ8 127 aa11.47□□□□□ -0.57
GTF3C1-207ENST00000567806 C10orf25Q5T742 122 aa11.46□□□□□ -0.57
GTF3C1-207ENST00000567806 FAM168BA1KXE4 195 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 KRTDAPP60985 99 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 HERVK_113P61574 105 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
GTF3C1-207ENST00000567806 IGKCP01834 107 aa11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 LINC01545Q5VT33 79 aa11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 Q8IZM0 81 aa11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 PRR26Q8N8Z3 221 aa11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 C6orf48Q9UBA6 75 aa11.44□□□□□ -0.58
GTF3C1-207ENST00000567806 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-207ENST00000567806 C6orf226Q5I0X4 101 aa11.43□□□□□ -0.58
GTF3C1-207ENST00000567806 CKS1BP61024 79 aa11.42□□□□□ -0.58
GTF3C1-207ENST00000567806 SMIM1B2RUZ4 78 aa11.41□□□□□ -0.58
GTF3C1-207ENST00000567806 H0Y9J4 135 aa11.41□□□□□ -0.58
GTF3C1-207ENST00000567806 UBE2BP63146 152 aa11.4□□□□□ -0.58
GTF3C1-207ENST00000567806 KRTAP11-1Q8IUC1 163 aa11.4□□□□□ -0.58
GTF3C1-207ENST00000567806 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
GTF3C1-207ENST00000567806 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms