RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MON2Q7Z3U7 1717 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 A0A1B0GU69 56 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 OOSP1A8MZH6 123 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 M0R2Z0 102 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 DBIP07108 87 aaKnown RBP-0.46□□□□□ -2.48
CDH1-211ENST00000567320 NEFHP12036 1026 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 UBA52P62987 128 aaKnown RBP-0.46□□□□□ -2.48
CDH1-211ENST00000567320 SEC11AP67812 179 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 KRTAP19-5Q3LI72 72 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 C6orf201Q7Z4U5 140 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 TAC4Q86UU9 113 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 MMGT1Q8N4V1 131 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 KCNRGQ8N5I3 272 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 USMG5Q96IX5 58 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 TMEM191AQ9H0A3 160 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 SERP1Q9Y6X1 66 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 V9GYQ6 96 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 TRIOO75962 3097 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 PI4KAP42356 2102 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 MYH7P12883 1935 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 C5P01031 1676 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 COL12A1Q99715 3063 aa-0.46□□□□□ -2.48
CDH1-211ENST00000567320 HTTP42858 3142 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 ANKRD50Q9ULJ7 1429 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 A2ML1A8K2U0 1454 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 RGPD2P0DJD1 1756 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 BCORQ6W2J9 1755 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 NBASA2RRP1 2371 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 LAMA1P25391 3075 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 VPS13BQ7Z7G8 4022 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 H0YAA0 97 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 H0YGG7 62 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 I3L3M4 83 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 GNG7O60262 68 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 SCGB1A1P11684 91 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 ASIPP42127 132 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 GUCA1AP43080 201 aaPredicted RBP-0.47□□□□□ -2.48
CDH1-211ENST00000567320 COPZ1P61923 177 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 BTG2P78543 158 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 MT1HP80294 61 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 DEFA5Q01523 94 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 DR1Q01658 176 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 Q0VG73 95 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 CATR1Q13166 79 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 SMCO1Q147U7 214 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 SMIM21Q3B7S5 101 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 HEPN1Q6WQI6 88 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 COMMD6Q7Z4G1 85 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 DEFB107AQ8IZN7 70 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 ANP32BQ92688 251 aaKnown RBP-0.47□□□□□ -2.48
CDH1-211ENST00000567320 TCEAL4Q96EI5 215 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 LYSTQ99698 3801 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 SPANXDQ9BXN6 97 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 RERGLQ9H628 205 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 FAIMQ9NVQ4 179 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 ALKQ9UM73 1620 aa-0.47□□□□□ -2.48
CDH1-211ENST00000567320 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.47□□□□□ -2.48
CDH1-211ENST00000567320 DNHD1Q96M86 4753 aa-0.47□□□□□ -2.49
CDH1-211ENST00000567320 QSER1Q2KHR3 1735 aa-0.47□□□□□ -2.49
CDH1-211ENST00000567320 SPHKAPQ2M3C7 1700 aa-0.47□□□□□ -2.49
CDH1-211ENST00000567320 AKAP13Q12802 2813 aa-0.47□□□□□ -2.49
CDH1-211ENST00000567320 DOPEY1Q5JWR5 2465 aa-0.47□□□□□ -2.49
CDH1-211ENST00000567320 SCAPERQ9BY12 1400 aa-0.47□□□□□ -2.49
CDH1-211ENST00000567320 FASNP49327 2511 aaKnown RBP-0.47□□□□□ -2.49
CDH1-211ENST00000567320 MYO18BQ8IUG5 2567 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 MAPKBP1O60336 1514 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 SACSQ9NZJ4 4579 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 DYNC1H1Q14204 4646 aaKnown RBP-0.48□□□□□ -2.49
CDH1-211ENST00000567320 USP32Q8NFA0 1604 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 TRAV30A0A087WSZ9 112 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 LOC285095A0A1B0GVY8 99 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 A0A1B0GWA3 101 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 J3QR89 54 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 SSSCA1O60232 199 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 S100A5P33763 92 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 B2MP61769 119 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 C12orf73Q69YU5 71 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 C5orf38Q86SI9 138 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 PRO1933Q9H354 126 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 MANBALQ9NQG1 85 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 COPZ2Q9P299 210 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 S4R3F8 94 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 ITPR3Q14573 2671 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 REV3LO60673 3130 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 ANKRD36A6QL64 1941 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 TACC2O95359 2948 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 CCDC141Q6ZP82 1450 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 NRXN1Q9ULB1 1477 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 ARHGAP5Q13017 1502 aa-0.48□□□□□ -2.49
CDH1-211ENST00000567320 PLXNC1O60486 1568 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 SAMD9Q5K651 1589 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 RGPD1P0DJD0 1748 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 ABCA3Q99758 1704 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 PDCD11Q14690 1871 aaKnown RBP-0.49□□□□□ -2.49
CDH1-211ENST00000567320 NBPF19A0A087WUL8 3843 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 H0Y9P7 68 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 NDUFA3O95167 84 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 SAA2P0DJI9 122 aaPredicted RBP-0.49□□□□□ -2.49
CDH1-211ENST00000567320 SNCAP37840 140 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 ARPC4P59998 168 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms