RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 BOD1L2Q8IYS8 172 aa8.83□□□□□ -1
CLK3-218ENST00000566926 DNAH5Q8TE73 4624 aa8.83□□□□□ -1
CLK3-218ENST00000566926 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.82□□□□□ -1
CLK3-218ENST00000566926 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
CLK3-218ENST00000566926 APOMO95445 188 aa8.82□□□□□ -1
CLK3-218ENST00000566926 C14orf144Q96I85 54 aa8.82□□□□□ -1
CLK3-218ENST00000566926 PRO1933Q9H354 126 aa8.82□□□□□ -1
CLK3-218ENST00000566926 RYR1P21817 5038 aa8.81□□□□□ -1
CLK3-218ENST00000566926 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
CLK3-218ENST00000566926 SPINK8P0C7L1 97 aa8.81□□□□□ -1
CLK3-218ENST00000566926 MALP21145 153 aa8.81□□□□□ -1
CLK3-218ENST00000566926 MYMXA0A1B0GTQ4 84 aa8.8□□□□□ -1
CLK3-218ENST00000566926 DDTP30046 118 aa8.8□□□□□ -1
CLK3-218ENST00000566926 FOXI1Q12951 378 aa8.8□□□□□ -1
CLK3-218ENST00000566926 Q8N1X5 172 aa8.8□□□□□ -1
CLK3-218ENST00000566926 IGLV10-54A0A075B6I4 117 aa8.79□□□□□ -1
CLK3-218ENST00000566926 GAGE12HA6NDE8 117 aa8.79□□□□□ -1
CLK3-218ENST00000566926 ZNF815PA8K554 130 aa8.79□□□□□ -1
CLK3-218ENST00000566926 USP17L23D6RBM5 183 aa8.79□□□□□ -1
CLK3-218ENST00000566926 HNRNPA3P51991 378 aaKnown RBP8.79□□□□□ -1
CLK3-218ENST00000566926 PCP2Q8IVA1 136 aa8.79□□□□□ -1
CLK3-218ENST00000566926 CXCL5P42830 114 aa8.78□□□□□ -1
CLK3-218ENST00000566926 XGP55808 180 aa8.78□□□□□ -1
CLK3-218ENST00000566926 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
CLK3-218ENST00000566926 C5orf38Q86SI9 138 aa8.78□□□□□ -1
CLK3-218ENST00000566926 HIGD1BQ9P298 99 aa8.78□□□□□ -1
CLK3-218ENST00000566926 HSPG2P98160 4391 aa8.77□□□□□ -1
CLK3-218ENST00000566926 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 NDUFA1O15239 70 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 PRSS2P07478 247 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 HERV-K104P63124 156 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 CFAP161Q6P656 301 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 Q8IZM0 81 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 NDUFA12Q9UI09 145 aa8.77□□□□□ -1.01
CLK3-218ENST00000566926 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
CLK3-218ENST00000566926 TSPEAR-AS2P59090 65 aa8.76□□□□□ -1.01
CLK3-218ENST00000566926 APOBP04114 4563 aaKnown RBP8.75□□□□□ -1.01
CLK3-218ENST00000566926 PCP4L1A6NKN8 68 aa8.75□□□□□ -1.01
CLK3-218ENST00000566926 F8WDY8 70 aa8.75□□□□□ -1.01
CLK3-218ENST00000566926 EPM2AB3EWF7 344 aa8.74□□□□□ -1.01
CLK3-218ENST00000566926 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
CLK3-218ENST00000566926 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
CLK3-218ENST00000566926 ORAOV1Q8WV07 137 aa8.74□□□□□ -1.01
CLK3-218ENST00000566926 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
CLK3-218ENST00000566926 TIMM17BO60830 172 aa8.73□□□□□ -1.01
CLK3-218ENST00000566926 TAL2Q16559 108 aa8.73□□□□□ -1.01
CLK3-218ENST00000566926 Q6ZSA8 131 aa8.73□□□□□ -1.01
CLK3-218ENST00000566926 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
CLK3-218ENST00000566926 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
CLK3-218ENST00000566926 CKS1BP61024 79 aa8.72□□□□□ -1.01
CLK3-218ENST00000566926 C2orf91Q6ZV80 131 aa8.72□□□□□ -1.01
CLK3-218ENST00000566926 Q6ZVH6 145 aa8.72□□□□□ -1.01
CLK3-218ENST00000566926 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
CLK3-218ENST00000566926 FAM30AQ9NZY2 134 aa8.72□□□□□ -1.01
CLK3-218ENST00000566926 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
CLK3-218ENST00000566926 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 M0R143 59 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 SPAG11BQ08648 103 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 HSD52Q0P140 79 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 LINC01620Q4KN68 170 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 COPS9Q8WXC6 57 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 KRTAP4-5Q9BYR2 181 aa8.71□□□□□ -1.02
CLK3-218ENST00000566926 SPANXB1Q9NS25 103 aaPredicted RBP8.71□□□□□ -1.02
CLK3-218ENST00000566926 GVQW2A0A096LPI5 108 aaPredicted RBP8.7□□□□□ -1.02
CLK3-218ENST00000566926 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
CLK3-218ENST00000566926 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
CLK3-218ENST00000566926 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
CLK3-218ENST00000566926 CNBPP62633 177 aaKnown RBP8.69□□□□□ -1.02
CLK3-218ENST00000566926 CTAG1AP78358 180 aa8.69□□□□□ -1.02
CLK3-218ENST00000566926 C2orf48Q96LS8 159 aa8.69□□□□□ -1.02
CLK3-218ENST00000566926 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
CLK3-218ENST00000566926 HAMPP81172 84 aa8.68□□□□□ -1.02
CLK3-218ENST00000566926 COX17Q14061 63 aa8.68□□□□□ -1.02
CLK3-218ENST00000566926 Q5VSD8 79 aa8.68□□□□□ -1.02
CLK3-218ENST00000566926 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
CLK3-218ENST00000566926 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLK3-218ENST00000566926 MEIG1Q5JSS6 88 aa8.67□□□□□ -1.02
CLK3-218ENST00000566926 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
CLK3-218ENST00000566926 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
CLK3-218ENST00000566926 PPDPFQ9H3Y8 114 aa8.67□□□□□ -1.02
CLK3-218ENST00000566926 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
CLK3-218ENST00000566926 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
CLK3-218ENST00000566926 IFITM1P13164 125 aa8.66□□□□□ -1.02
CLK3-218ENST00000566926 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
CLK3-218ENST00000566926 SPANXCQ9NY87 97 aa8.66□□□□□ -1.02
CLK3-218ENST00000566926 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
CLK3-218ENST00000566926 A6NJY4 79 aa8.65□□□□□ -1.02
CLK3-218ENST00000566926 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
CLK3-218ENST00000566926 ERG28Q9UKR5 140 aa8.65□□□□□ -1.02
CLK3-218ENST00000566926 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
CLK3-218ENST00000566926 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
CLK3-218ENST00000566926 PTTG1IPP53801 180 aa8.64□□□□□ -1.03
CLK3-218ENST00000566926 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
CLK3-218ENST00000566926 CEND1Q8N111 149 aa8.64□□□□□ -1.03
CLK3-218ENST00000566926 CAMK2N2Q96S95 79 aa8.64□□□□□ -1.03
CLK3-218ENST00000566926 LITAFQ99732 161 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms