RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-215ENST00000565559 IGLV4-3A0A075B6K6 122 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 COLCA2A8K830 154 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 LINC00614P0C842 121 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 XCL1P47992 114 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 RAB5BP61020 215 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 FOXI1Q12951 378 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 ERASQ7Z444 233 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 TIMM17AQ99595 171 aa6.86□□□□□ -1.31
CAPN3-215ENST00000565559 IGKV2-24A0A0C4DH68 120 aa6.85□□□□□ -1.31
CAPN3-215ENST00000565559 Q6ZN92 141 aa6.85□□□□□ -1.31
CAPN3-215ENST00000565559 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
CAPN3-215ENST00000565559 URB1-AS1Q96HZ7 61 aa6.85□□□□□ -1.31
CAPN3-215ENST00000565559 AMELXQ99217 191 aa6.85□□□□□ -1.31
CAPN3-215ENST00000565559 IFITM10A6NMD0 228 aa6.84□□□□□ -1.31
CAPN3-215ENST00000565559 TRGC2P03986 189 aa6.84□□□□□ -1.31
CAPN3-215ENST00000565559 COX6A2Q02221 97 aa6.84□□□□□ -1.31
CAPN3-215ENST00000565559 C15orf56Q8N910 161 aa6.84□□□□□ -1.31
CAPN3-215ENST00000565559 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
CAPN3-215ENST00000565559 VCX2Q9H322 139 aa6.84□□□□□ -1.31
CAPN3-215ENST00000565559 IGHV3OR16-9A0A0B4J2B5 98 aa6.83□□□□□ -1.32
CAPN3-215ENST00000565559 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
CAPN3-215ENST00000565559 COX7A2LO14548 114 aa6.83□□□□□ -1.32
CAPN3-215ENST00000565559 LINC00173Q6ZV60 143 aa6.83□□□□□ -1.32
CAPN3-215ENST00000565559 C2orf88Q9BSF0 95 aa6.83□□□□□ -1.32
CAPN3-215ENST00000565559 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-215ENST00000565559 S100A1P23297 94 aa6.82□□□□□ -1.32
CAPN3-215ENST00000565559 UBE2D1P51668 147 aa6.82□□□□□ -1.32
CAPN3-215ENST00000565559 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
CAPN3-215ENST00000565559 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
CAPN3-215ENST00000565559 A0A096LNJ9 63 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 SCO1O75880 301 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 APOMO95445 188 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 HBDP02042 147 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 MALP21145 153 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 SEC11AP67812 179 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 LINC00242Q5T6M2 205 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 LINC00474Q9P2X8 69 aa6.81□□□□□ -1.32
CAPN3-215ENST00000565559 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-215ENST00000565559 ZC2HC1BQ5TFG8 222 aa6.8□□□□□ -1.32
CAPN3-215ENST00000565559 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
CAPN3-215ENST00000565559 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
CAPN3-215ENST00000565559 A0A087WZ39 114 aa6.79□□□□□ -1.32
CAPN3-215ENST00000565559 HIGD2BQ4VC39 106 aa6.79□□□□□ -1.32
CAPN3-215ENST00000565559 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
CAPN3-215ENST00000565559 BAGE3Q86Y29 109 aa6.79□□□□□ -1.32
CAPN3-215ENST00000565559 LINC01561Q8N1V8 128 aa6.79□□□□□ -1.32
CAPN3-215ENST00000565559 ATP5LO75964 103 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 HERVK_113P63121 156 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 PMVKQ15126 192 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 OR10D4PQ8NGN7 298 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 CST9LQ9H4G1 147 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
CAPN3-215ENST00000565559 F8WDY8 70 aa6.77□□□□□ -1.33
CAPN3-215ENST00000565559 ATP6V1G1O75348 118 aa6.77□□□□□ -1.33
CAPN3-215ENST00000565559 HSBP1O75506 76 aa6.77□□□□□ -1.33
CAPN3-215ENST00000565559 PMCHL1Q16048 86 aa6.77□□□□□ -1.33
CAPN3-215ENST00000565559 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
CAPN3-215ENST00000565559 IGLV4-69A0A075B6H9 119 aa6.76□□□□□ -1.33
CAPN3-215ENST00000565559 A0A096LNI7 61 aa6.76□□□□□ -1.33
CAPN3-215ENST00000565559 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
CAPN3-215ENST00000565559 SYCNQ0VAF6 134 aa6.76□□□□□ -1.33
CAPN3-215ENST00000565559 ORAOV1Q8WV07 137 aa6.76□□□□□ -1.33
CAPN3-215ENST00000565559 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
CAPN3-215ENST00000565559 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
CAPN3-215ENST00000565559 SERF1AO75920 110 aa6.75□□□□□ -1.33
CAPN3-215ENST00000565559 LINC00526Q96FQ7 95 aa6.75□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 SPAG11BQ08648 103 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-215ENST00000565559 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 DIRC1Q969H9 104 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 CARD19Q96LW7 228 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
CAPN3-215ENST00000565559 IGLC3P0DOY3 106 aa6.73□□□□□ -1.33
CAPN3-215ENST00000565559 NDUFA6P56556 154 aa6.73□□□□□ -1.33
CAPN3-215ENST00000565559 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
CAPN3-215ENST00000565559 IFI27L1Q96BM0 104 aa6.73□□□□□ -1.33
CAPN3-215ENST00000565559 TRAV12-1A0A0B4J245 112 aa6.72□□□□□ -1.33
CAPN3-215ENST00000565559 NDUFA1O15239 70 aa6.72□□□□□ -1.33
CAPN3-215ENST00000565559 NUPR1O60356 82 aa6.72□□□□□ -1.33
CAPN3-215ENST00000565559 LINC00469Q8N7U9 141 aa6.72□□□□□ -1.33
CAPN3-215ENST00000565559 MRPL35Q9NZE8 188 aaKnown RBP6.72□□□□□ -1.33
CAPN3-215ENST00000565559 H3BRM9 83 aa6.71□□□□□ -1.34
CAPN3-215ENST00000565559 LEPROTL1O95214 131 aa6.71□□□□□ -1.34
CAPN3-215ENST00000565559 RPL13AP40429 203 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms