RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
SYNGR3-204ENST00000564642 TINCRA0A1B0GVN0 87 aa11.43□□□□□ -0.58
SYNGR3-204ENST00000564642 PMVKQ15126 192 aa11.43□□□□□ -0.58
SYNGR3-204ENST00000564642 LINC00469Q8N7U9 141 aa11.43□□□□□ -0.58
SYNGR3-204ENST00000564642 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
SYNGR3-204ENST00000564642 RAB5BP61020 215 aa11.41□□□□□ -0.58
SYNGR3-204ENST00000564642 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
SYNGR3-204ENST00000564642 URB1-AS1Q96HZ7 61 aa11.4□□□□□ -0.58
SYNGR3-204ENST00000564642 HBDP02042 147 aa11.39□□□□□ -0.59
SYNGR3-204ENST00000564642 NDUFA6P56556 154 aa11.39□□□□□ -0.59
SYNGR3-204ENST00000564642 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
SYNGR3-204ENST00000564642 PDZD11Q5EBL8 140 aa11.38□□□□□ -0.59
SYNGR3-204ENST00000564642 LRP1Q07954 4544 aaKnown RBP11.38□□□□□ -0.59
SYNGR3-204ENST00000564642 HMCN2Q8NDA2 5059 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 A0A096LNJ9 63 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 SMIM1B2RUZ4 78 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 F8VRH5 84 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 CXCL5P42830 114 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 FAM19A5Q7Z5A7 132 aaPredicted RBP11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 YPEL4Q96NS1 127 aa11.37□□□□□ -0.59
SYNGR3-204ENST00000564642 SPINK6Q6UWN8 80 aa11.36□□□□□ -0.59
SYNGR3-204ENST00000564642 H3BRM9 83 aa11.35□□□□□ -0.59
SYNGR3-204ENST00000564642 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
SYNGR3-204ENST00000564642 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
SYNGR3-204ENST00000564642 ATP5LO75964 103 aa11.34□□□□□ -0.59
SYNGR3-204ENST00000564642 SPINK8P0C7L1 97 aa11.34□□□□□ -0.59
SYNGR3-204ENST00000564642 CBLN2Q8IUK8 224 aa11.34□□□□□ -0.59
SYNGR3-204ENST00000564642 IGLC3P0DOY3 106 aa11.33□□□□□ -0.6
SYNGR3-204ENST00000564642 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
SYNGR3-204ENST00000564642 SLC7A5P1Q8MH63 180 aa11.33□□□□□ -0.6
SYNGR3-204ENST00000564642 FAT3Q8TDW7 4589 aa11.33□□□□□ -0.6
SYNGR3-204ENST00000564642 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
SYNGR3-204ENST00000564642 C1orf137Q5JT78 98 aa11.32□□□□□ -0.6
SYNGR3-204ENST00000564642 SERTAD4-AS1Q5TG53 156 aa11.32□□□□□ -0.6
SYNGR3-204ENST00000564642 PKHD1L1Q86WI1 4243 aa11.32□□□□□ -0.6
SYNGR3-204ENST00000564642 M0QXV9 152 aa11.31□□□□□ -0.6
SYNGR3-204ENST00000564642 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
SYNGR3-204ENST00000564642 BAGE3Q86Y29 109 aa11.31□□□□□ -0.6
SYNGR3-204ENST00000564642 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
SYNGR3-204ENST00000564642 KRTAP7-1Q8IUC3 87 aa11.3□□□□□ -0.6
SYNGR3-204ENST00000564642 MT1HL1P0DM35 61 aa11.29□□□□□ -0.6
SYNGR3-204ENST00000564642 UBE2BP63146 152 aa11.29□□□□□ -0.6
SYNGR3-204ENST00000564642 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
SYNGR3-204ENST00000564642 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
SYNGR3-204ENST00000564642 LINC01600Q96MT4 127 aa11.28□□□□□ -0.6
SYNGR3-204ENST00000564642 TRGC2P03986 189 aa11.26□□□□□ -0.61
SYNGR3-204ENST00000564642 HSBP1O75506 76 aa11.25□□□□□ -0.61
SYNGR3-204ENST00000564642 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
SYNGR3-204ENST00000564642 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
SYNGR3-204ENST00000564642 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
SYNGR3-204ENST00000564642 IFI27L1Q96BM0 104 aa11.25□□□□□ -0.61
SYNGR3-204ENST00000564642 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
SYNGR3-204ENST00000564642 IGLV5-39A0A0G2JS06 123 aa11.24□□□□□ -0.61
SYNGR3-204ENST00000564642 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
SYNGR3-204ENST00000564642 C11orf86A6NJI1 115 aa11.23□□□□□ -0.61
SYNGR3-204ENST00000564642 LBHQ53QV2 105 aaPredicted RBP11.23□□□□□ -0.61
SYNGR3-204ENST00000564642 TRAV12-1A0A0B4J245 112 aa11.21□□□□□ -0.61
SYNGR3-204ENST00000564642 FAM19A2Q8N3H0 131 aa11.21□□□□□ -0.61
SYNGR3-204ENST00000564642 DIRC1Q969H9 104 aa11.21□□□□□ -0.61
SYNGR3-204ENST00000564642 PFN2P35080 140 aa11.2□□□□□ -0.62
SYNGR3-204ENST00000564642 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
SYNGR3-204ENST00000564642 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
SYNGR3-204ENST00000564642 ODF1Q14990 250 aa11.18□□□□□ -0.62
SYNGR3-204ENST00000564642 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
SYNGR3-204ENST00000564642 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
SYNGR3-204ENST00000564642 COLCA2A8K830 154 aa11.17□□□□□ -0.62
SYNGR3-204ENST00000564642 ZNF625Q96I27 306 aaPredicted RBP11.17□□□□□ -0.62
SYNGR3-204ENST00000564642 ERG28Q9UKR5 140 aa11.17□□□□□ -0.62
SYNGR3-204ENST00000564642 NUPR1O60356 82 aa11.16□□□□□ -0.62
SYNGR3-204ENST00000564642 SERF1AO75920 110 aa11.16□□□□□ -0.62
SYNGR3-204ENST00000564642 KRTAP10-8P60410 259 aa11.16□□□□□ -0.62
SYNGR3-204ENST00000564642 COX17Q14061 63 aa11.16□□□□□ -0.62
SYNGR3-204ENST00000564642 TMEM223A0PJW6 202 aa11.15□□□□□ -0.62
SYNGR3-204ENST00000564642 H0Y9J4 135 aa11.15□□□□□ -0.62
SYNGR3-204ENST00000564642 LEPROTL1O95214 131 aa11.15□□□□□ -0.62
SYNGR3-204ENST00000564642 NKAPP1Q8N9T2 125 aa11.15□□□□□ -0.62
SYNGR3-204ENST00000564642 RNF213Q63HN8 5207 aa11.15□□□□□ -0.63
SYNGR3-204ENST00000564642 H0Y8G0 127 aa11.14□□□□□ -0.63
SYNGR3-204ENST00000564642 LINC00167Q96N53 147 aa11.14□□□□□ -0.63
SYNGR3-204ENST00000564642 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
SYNGR3-204ENST00000564642 IGLV5-37A0A075B6J1 123 aa11.12□□□□□ -0.63
SYNGR3-204ENST00000564642 LINC00310P59036 64 aa11.12□□□□□ -0.63
SYNGR3-204ENST00000564642 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
SYNGR3-204ENST00000564642 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
SYNGR3-204ENST00000564642 ZNF861PO60384 105 aa11.11□□□□□ -0.63
SYNGR3-204ENST00000564642 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
SYNGR3-204ENST00000564642 FABP4P15090 132 aa11.1□□□□□ -0.63
SYNGR3-204ENST00000564642 LINC00158P58513 81 aa11.1□□□□□ -0.63
SYNGR3-204ENST00000564642 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
SYNGR3-204ENST00000564642 BCE1O60756 84 aa11.08□□□□□ -0.64
SYNGR3-204ENST00000564642 ATP6V1G1O75348 118 aa11.07□□□□□ -0.64
SYNGR3-204ENST00000564642 SCO1O75880 301 aa11.07□□□□□ -0.64
SYNGR3-204ENST00000564642 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
SYNGR3-204ENST00000564642 VPREB1P12018 145 aa11.06□□□□□ -0.64
SYNGR3-204ENST00000564642 PLNP26678 52 aa11.06□□□□□ -0.64
SYNGR3-204ENST00000564642 RPL28P46779 137 aaKnown RBP11.06□□□□□ -0.64
SYNGR3-204ENST00000564642 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms