RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 DNAH5Q8TE73 4624 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 A0A087WTM6 91 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 C16orf90A8MZG2 172 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 F8WDY8 70 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 CXCL5P42830 114 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 KIAA0087Q14695 138 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 PAM16Q9Y3D7 125 aa11.12□□□□□ -0.63
CMTM3-208ENST00000564247 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
CMTM3-208ENST00000564247 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
CMTM3-208ENST00000564247 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
CMTM3-208ENST00000564247 WFDC2Q14508 124 aa11.1□□□□□ -0.63
CMTM3-208ENST00000564247 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
CMTM3-208ENST00000564247 LINC00526Q96FQ7 95 aa11.1□□□□□ -0.63
CMTM3-208ENST00000564247 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
CMTM3-208ENST00000564247 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
CMTM3-208ENST00000564247 NDUFA1O15239 70 aa11.09□□□□□ -0.63
CMTM3-208ENST00000564247 NDUFA12Q9UI09 145 aa11.09□□□□□ -0.63
CMTM3-208ENST00000564247 RYR1P21817 5038 aa11.09□□□□□ -0.63
CMTM3-208ENST00000564247 HSPG2P98160 4391 aa11.08□□□□□ -0.64
CMTM3-208ENST00000564247 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
CMTM3-208ENST00000564247 Q8N814 137 aa11.08□□□□□ -0.64
CMTM3-208ENST00000564247 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
CMTM3-208ENST00000564247 TSPEAR-AS2P59090 65 aa11.07□□□□□ -0.64
CMTM3-208ENST00000564247 KRTAP10-2P60368 255 aa11.07□□□□□ -0.64
CMTM3-208ENST00000564247 HERV-K104P63124 156 aa11.07□□□□□ -0.64
CMTM3-208ENST00000564247 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
CMTM3-208ENST00000564247 APOBP04114 4563 aaKnown RBP11.07□□□□□ -0.64
CMTM3-208ENST00000564247 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
CMTM3-208ENST00000564247 UNQ6190/PRO20217Q6UXQ8 127 aa11.06□□□□□ -0.64
CMTM3-208ENST00000564247 C12orf57Q99622 126 aa11.06□□□□□ -0.64
CMTM3-208ENST00000564247 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
CMTM3-208ENST00000564247 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
CMTM3-208ENST00000564247 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
CMTM3-208ENST00000564247 TRBV30A0A0K0K1B3 111 aa11.04□□□□□ -0.64
CMTM3-208ENST00000564247 LINC00587B1AMM8 73 aa11.04□□□□□ -0.64
CMTM3-208ENST00000564247 COX8AP10176 69 aa11.04□□□□□ -0.64
CMTM3-208ENST00000564247 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
CMTM3-208ENST00000564247 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
CMTM3-208ENST00000564247 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
CMTM3-208ENST00000564247 CDK2AP2O75956 126 aa11.03□□□□□ -0.64
CMTM3-208ENST00000564247 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
CMTM3-208ENST00000564247 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
CMTM3-208ENST00000564247 Q6ZRU5 148 aa11.03□□□□□ -0.64
CMTM3-208ENST00000564247 LINC00518Q8N0U6 118 aa11.03□□□□□ -0.64
CMTM3-208ENST00000564247 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
CMTM3-208ENST00000564247 SLPIP03973 132 aa11.02□□□□□ -0.65
CMTM3-208ENST00000564247 CIRBPQ14011 172 aaKnown RBP11.02□□□□□ -0.65
CMTM3-208ENST00000564247 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
CMTM3-208ENST00000564247 C10orf25Q5T742 122 aa11.02□□□□□ -0.65
CMTM3-208ENST00000564247 SLC25A34Q6PIV7 304 aa11.02□□□□□ -0.65
CMTM3-208ENST00000564247 DLEU1O43261 78 aa11.01□□□□□ -0.65
CMTM3-208ENST00000564247 SCGB1D4Q6XE38 83 aa11.01□□□□□ -0.65
CMTM3-208ENST00000564247 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
CMTM3-208ENST00000564247 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
CMTM3-208ENST00000564247 IGLV5-52A0A0A0MRZ9 124 aa10.99□□□□□ -0.65
CMTM3-208ENST00000564247 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
CMTM3-208ENST00000564247 COX17Q14061 63 aa10.99□□□□□ -0.65
CMTM3-208ENST00000564247 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
CMTM3-208ENST00000564247 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
CMTM3-208ENST00000564247 PFN2P35080 140 aa10.98□□□□□ -0.65
CMTM3-208ENST00000564247 LINC00158P58513 81 aa10.98□□□□□ -0.65
CMTM3-208ENST00000564247 C9orf116Q5BN46 136 aaPredicted RBP10.97□□□□□ -0.65
CMTM3-208ENST00000564247 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
CMTM3-208ENST00000564247 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
CMTM3-208ENST00000564247 A0A0U1RRA0 63 aa10.96□□□□□ -0.65
CMTM3-208ENST00000564247 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
CMTM3-208ENST00000564247 FUSP35637 526 aaKnown RBP eCLIP10.96□□□□□ -0.65
CMTM3-208ENST00000564247 PRO1933Q9H354 126 aa10.96□□□□□ -0.65
CMTM3-208ENST00000564247 PCLOQ9Y6V0 5065 aa10.95□□□□□ -0.66
CMTM3-208ENST00000564247 LOC107984640A0A0U1RRK4 108 aa10.95□□□□□ -0.66
CMTM3-208ENST00000564247 TIMM17BO60830 172 aa10.95□□□□□ -0.66
CMTM3-208ENST00000564247 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
CMTM3-208ENST00000564247 NDUFC2-KCTD14E9PQ53 114 aa10.94□□□□□ -0.66
CMTM3-208ENST00000564247 TSTD3H0UI37 97 aa10.94□□□□□ -0.66
CMTM3-208ENST00000564247 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
CMTM3-208ENST00000564247 MIEN1Q9BRT3 115 aa10.93□□□□□ -0.66
CMTM3-208ENST00000564247 RPL18AQ02543 176 aaKnown RBP10.92□□□□□ -0.66
CMTM3-208ENST00000564247 MIR7-3HGQ8N6C7 128 aa10.91□□□□□ -0.66
CMTM3-208ENST00000564247 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
CMTM3-208ENST00000564247 GCSHP23434 173 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 KRTAP10-1P60331 282 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 GAGE2BQ13066 116 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 SRSF9Q13242 221 aaKnown RBP eCLIP10.9□□□□□ -0.66
CMTM3-208ENST00000564247 GAGE2EQ4V326 116 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 Q6ZVH6 145 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 KRTAP17-1Q9BYP8 105 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 GAGE2DQ9UEU5 116 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
CMTM3-208ENST00000564247 LINC01620Q4KN68 170 aa10.89□□□□□ -0.67
CMTM3-208ENST00000564247 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
CMTM3-208ENST00000564247 SDIM1Q6ZPB5 146 aa10.89□□□□□ -0.67
CMTM3-208ENST00000564247 Q6ZRP5 223 aa10.89□□□□□ -0.67
CMTM3-208ENST00000564247 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
CMTM3-208ENST00000564247 HNRNPA3P51991 378 aaKnown RBP10.88□□□□□ -0.67
CMTM3-208ENST00000564247 DAND5Q8N907 189 aa10.88□□□□□ -0.67
CMTM3-208ENST00000564247 LITAFQ99732 161 aa10.88□□□□□ -0.67
CMTM3-208ENST00000564247 SPANXDQ9BXN6 97 aa10.88□□□□□ -0.67
CMTM3-208ENST00000564247 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms