RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 Q6ZRU5 148 aa17.54■□□□□ 0.4
SH3GL3-205ENST00000563901 IGKV2D-26A0A0A0MRZ7 120 aa17.54■□□□□ 0.4
SH3GL3-205ENST00000563901 LINC01620Q4KN68 170 aa17.54■□□□□ 0.4
SH3GL3-205ENST00000563901 LEPROTO15243 131 aa17.53■□□□□ 0.4
SH3GL3-205ENST00000563901 CDPF1Q6NVV7 123 aa17.53■□□□□ 0.4
SH3GL3-205ENST00000563901 C2orf48Q96LS8 159 aa17.53■□□□□ 0.4
SH3GL3-205ENST00000563901 E9PLD3 99 aa17.52■□□□□ 0.4
SH3GL3-205ENST00000563901 SYCNQ0VAF6 134 aa17.52■□□□□ 0.4
SH3GL3-205ENST00000563901 CKS1BP61024 79 aa17.51■□□□□ 0.39
SH3GL3-205ENST00000563901 CNBPP62633 177 aaKnown RBP17.51■□□□□ 0.39
SH3GL3-205ENST00000563901 CARD19Q96LW7 228 aa17.5■□□□□ 0.39
SH3GL3-205ENST00000563901 IGLV5-52A0A0A0MRZ9 124 aa17.5■□□□□ 0.39
SH3GL3-205ENST00000563901 NDUFA1O15239 70 aa17.5■□□□□ 0.39
SH3GL3-205ENST00000563901 J3QQQ9 107 aa17.49■□□□□ 0.39
SH3GL3-205ENST00000563901 PLEKHB2Q96CS7 222 aa17.48■□□□□ 0.39
SH3GL3-205ENST00000563901 C6orf48Q9UBA6 75 aa17.48■□□□□ 0.39
SH3GL3-205ENST00000563901 DNAH5Q8TE73 4624 aa17.48■□□□□ 0.39
SH3GL3-205ENST00000563901 TTTY13Q9BZ97 58 aa17.47■□□□□ 0.39
SH3GL3-205ENST00000563901 S100A12P80511 92 aa17.47■□□□□ 0.39
SH3GL3-205ENST00000563901 C9orf116Q5BN46 136 aaPredicted RBP17.47■□□□□ 0.39
SH3GL3-205ENST00000563901 ZNF625Q96I27 306 aaPredicted RBP17.46■□□□□ 0.39
SH3GL3-205ENST00000563901 LGALS3P17931 250 aaKnown RBP17.45■□□□□ 0.38
SH3GL3-205ENST00000563901 CXCL5P42830 114 aa17.45■□□□□ 0.38
SH3GL3-205ENST00000563901 NMUP48645 174 aa17.45■□□□□ 0.38
SH3GL3-205ENST00000563901 PKHD1P08F94 4074 aa17.45■□□□□ 0.38
SH3GL3-205ENST00000563901 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.44■□□□□ 0.38
SH3GL3-205ENST00000563901 NDUFA12Q9UI09 145 aa17.44■□□□□ 0.38
SH3GL3-205ENST00000563901 HSBP1L1C9JCN9 74 aa17.43■□□□□ 0.38
SH3GL3-205ENST00000563901 F8WDY8 70 aa17.43■□□□□ 0.38
SH3GL3-205ENST00000563901 C9orf163Q8N9P6 203 aa17.43■□□□□ 0.38
SH3GL3-205ENST00000563901 VAMP8Q9BV40 100 aa17.43■□□□□ 0.38
SH3GL3-205ENST00000563901 PGPEP1Q9NXJ5 209 aa17.43■□□□□ 0.38
SH3GL3-205ENST00000563901 PAM16Q9Y3D7 125 aa17.42■□□□□ 0.38
SH3GL3-205ENST00000563901 PCP2Q8IVA1 136 aa17.39■□□□□ 0.38
SH3GL3-205ENST00000563901 TRBV30A0A0K0K1B3 111 aa17.39■□□□□ 0.37
SH3GL3-205ENST00000563901 MYMXA0A1B0GTQ4 84 aa17.36■□□□□ 0.37
SH3GL3-205ENST00000563901 SPATA45Q537H7 98 aa17.36■□□□□ 0.37
SH3GL3-205ENST00000563901 TP73-AS1Q9UF72 201 aa17.36■□□□□ 0.37
SH3GL3-205ENST00000563901 ZNF815PA8K554 130 aa17.36■□□□□ 0.37
SH3GL3-205ENST00000563901 GCSHP23434 173 aa17.35■□□□□ 0.37
SH3GL3-205ENST00000563901 RNF151Q2KHN1 245 aa17.35■□□□□ 0.37
SH3GL3-205ENST00000563901 PFN2P35080 140 aa17.34■□□□□ 0.37
SH3GL3-205ENST00000563901 KRTAP10-1P60331 282 aa17.34■□□□□ 0.37
SH3GL3-205ENST00000563901 A0A0U1RRA0 63 aa17.33■□□□□ 0.37
SH3GL3-205ENST00000563901 C16orf90A8MZG2 172 aa17.33■□□□□ 0.37
SH3GL3-205ENST00000563901 SDIM1Q6ZPB5 146 aa17.33■□□□□ 0.37
SH3GL3-205ENST00000563901 ERG28Q9UKR5 140 aa17.33■□□□□ 0.37
SH3GL3-205ENST00000563901 RPL18AQ02543 176 aaKnown RBP17.32■□□□□ 0.36
SH3GL3-205ENST00000563901 SFTA2Q6UW10 78 aa17.32■□□□□ 0.36
SH3GL3-205ENST00000563901 HERV-K104P63124 156 aa17.31■□□□□ 0.36
SH3GL3-205ENST00000563901 Q6ZRP5 223 aa17.31■□□□□ 0.36
SH3GL3-205ENST00000563901 A0A096LNI7 61 aa17.3■□□□□ 0.36
SH3GL3-205ENST00000563901 A0A0J9YXY3 114 aa17.3■□□□□ 0.36
SH3GL3-205ENST00000563901 LOC107984640A0A0U1RRK4 108 aa17.3■□□□□ 0.36
SH3GL3-205ENST00000563901 CHTF8P0CG12 524 aa17.3■□□□□ 0.36
SH3GL3-205ENST00000563901 MEIG1Q5JSS6 88 aa17.3■□□□□ 0.36
SH3GL3-205ENST00000563901 SMIM13P0DJ93 91 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 GAGE2BQ13066 116 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 IGKV2-24A0A0C4DH68 120 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 PANO1I0J062 215 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 GAGE2EQ4V326 116 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 C14orf144Q96I85 54 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 GAGE2DQ9UEU5 116 aa17.29■□□□□ 0.36
SH3GL3-205ENST00000563901 EPPK1P58107 5090 aaKnown RBP17.28■□□□□ 0.36
SH3GL3-205ENST00000563901 NDUFC2-KCTD14E9PQ53 114 aa17.28■□□□□ 0.36
SH3GL3-205ENST00000563901 DYNC1H1Q14204 4646 aaKnown RBP17.27■□□□□ 0.36
SH3GL3-205ENST00000563901 TLX1NBP0CAT3 122 aa17.27■□□□□ 0.36
SH3GL3-205ENST00000563901 LINC00158P58513 81 aa17.26■□□□□ 0.35
SH3GL3-205ENST00000563901 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.26■□□□□ 0.35
SH3GL3-205ENST00000563901 PRO1933Q9H354 126 aa17.25■□□□□ 0.35
SH3GL3-205ENST00000563901 COX8AP10176 69 aa17.25■□□□□ 0.35
SH3GL3-205ENST00000563901 DAND5Q8N907 189 aa17.25■□□□□ 0.35
SH3GL3-205ENST00000563901 FAM30AQ9NZY2 134 aa17.25■□□□□ 0.35
SH3GL3-205ENST00000563901 LRP1BQ9NZR2 4599 aa17.24■□□□□ 0.35
SH3GL3-205ENST00000563901 TSTD3H0UI37 97 aa17.24■□□□□ 0.35
SH3GL3-205ENST00000563901 PTTG1IPP53801 180 aa17.24■□□□□ 0.35
SH3GL3-205ENST00000563901 XAGE1AQ9HD64 81 aa17.23■□□□□ 0.35
SH3GL3-205ENST00000563901 SCGB1D4Q6XE38 83 aa17.22■□□□□ 0.35
SH3GL3-205ENST00000563901 COX17Q14061 63 aa17.21■□□□□ 0.35
SH3GL3-205ENST00000563901 ADAMTSL4-AS1Q5T5F5 129 aa17.21■□□□□ 0.35
SH3GL3-205ENST00000563901 BOD1L2Q8IYS8 172 aa17.21■□□□□ 0.35
SH3GL3-205ENST00000563901 MIR7-3HGQ8N6C7 128 aa17.21■□□□□ 0.35
SH3GL3-205ENST00000563901 LITAFQ99732 161 aa17.21■□□□□ 0.35
SH3GL3-205ENST00000563901 DNAH8Q96JB1 4490 aa17.2■□□□□ 0.34
SH3GL3-205ENST00000563901 C9orf129Q5T035 196 aaKnown RBP17.2■□□□□ 0.34
SH3GL3-205ENST00000563901 HAMPP81172 84 aa17.19■□□□□ 0.34
SH3GL3-205ENST00000563901 SND1-IT1Q9HBX3 110 aa17.18■□□□□ 0.34
SH3GL3-205ENST00000563901 SPACA4Q8TDM5 124 aa17.17■□□□□ 0.34
SH3GL3-205ENST00000563901 PKIGQ9Y2B9 76 aa17.17■□□□□ 0.34
SH3GL3-205ENST00000563901 LINC00587B1AMM8 73 aa17.16■□□□□ 0.34
SH3GL3-205ENST00000563901 FAM168BA1KXE4 195 aa17.15■□□□□ 0.34
SH3GL3-205ENST00000563901 NPC2P61916 151 aa17.15■□□□□ 0.34
SH3GL3-205ENST00000563901 CIRBPQ14011 172 aaKnown RBP17.15■□□□□ 0.34
SH3GL3-205ENST00000563901 Q6ZSA8 131 aa17.15■□□□□ 0.34
SH3GL3-205ENST00000563901 SLC25A34Q6PIV7 304 aa17.14■□□□□ 0.33
SH3GL3-205ENST00000563901 PCP4L1A6NKN8 68 aa17.14■□□□□ 0.33
SH3GL3-205ENST00000563901 DLEU1O43261 78 aa17.14■□□□□ 0.33
SH3GL3-205ENST00000563901 DPH3Q96FX2 82 aa17.14■□□□□ 0.33
SH3GL3-205ENST00000563901 UQCR10Q9UDW1 63 aa17.14■□□□□ 0.33
SH3GL3-205ENST00000563901 EIF4EBP3O60516 100 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms