RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TINCRA0A1B0GVN0 87 aa17.63■□□□□ 0.41
NME3-203ENST00000563367 PRSS2P07478 247 aa17.63■□□□□ 0.41
NME3-203ENST00000563367 PRR3P79522 188 aaKnown RBP17.63■□□□□ 0.41
NME3-203ENST00000563367 PMVKQ15126 192 aa17.63■□□□□ 0.41
NME3-203ENST00000563367 PMCHL1Q16048 86 aa17.63■□□□□ 0.41
NME3-203ENST00000563367 Q8IZM0 81 aa17.62■□□□□ 0.41
NME3-203ENST00000563367 LINC00469Q8N7U9 141 aa17.62■□□□□ 0.41
NME3-203ENST00000563367 PACRGQ96M98 296 aaPredicted RBP17.62■□□□□ 0.41
NME3-203ENST00000563367 IGLV5-45A0A087WSX0 123 aa17.6■□□□□ 0.41
NME3-203ENST00000563367 C6orf226Q5I0X4 101 aa17.6■□□□□ 0.41
NME3-203ENST00000563367 OXTP01178 125 aa17.59■□□□□ 0.41
NME3-203ENST00000563367 HBDP02042 147 aa17.59■□□□□ 0.41
NME3-203ENST00000563367 CKS1BP61024 79 aa17.59■□□□□ 0.41
NME3-203ENST00000563367 GAGE2EQ4V326 116 aa17.59■□□□□ 0.41
NME3-203ENST00000563367 GAGE2DQ9UEU5 116 aa17.59■□□□□ 0.41
NME3-203ENST00000563367 FAM168BA1KXE4 195 aa17.58■□□□□ 0.4
NME3-203ENST00000563367 SMIM1B2RUZ4 78 aa17.58■□□□□ 0.4
NME3-203ENST00000563367 RAB5BP61020 215 aa17.58■□□□□ 0.4
NME3-203ENST00000563367 PDZD11Q5EBL8 140 aa17.57■□□□□ 0.4
NME3-203ENST00000563367 NDUFC2-KCTD14E9PQ53 114 aa17.56■□□□□ 0.4
NME3-203ENST00000563367 PHF5AQ7RTV0 110 aaKnown RBP17.55■□□□□ 0.4
NME3-203ENST00000563367 NDUFA6P56556 154 aa17.54■□□□□ 0.4
NME3-203ENST00000563367 SPINK8P0C7L1 97 aa17.52■□□□□ 0.4
NME3-203ENST00000563367 KRTAP7-1Q8IUC3 87 aa17.52■□□□□ 0.4
NME3-203ENST00000563367 IGLC3P0DOY3 106 aa17.51■□□□□ 0.39
NME3-203ENST00000563367 C9orf129Q5T035 196 aaKnown RBP17.51■□□□□ 0.39
NME3-203ENST00000563367 COX7B2Q8TF08 81 aa17.51■□□□□ 0.39
NME3-203ENST00000563367 F8VRH5 84 aa17.5■□□□□ 0.39
NME3-203ENST00000563367 FAM19A5Q7Z5A7 132 aaPredicted RBP17.5■□□□□ 0.39
NME3-203ENST00000563367 ATP5LO75964 103 aa17.49■□□□□ 0.39
NME3-203ENST00000563367 CXCL5P42830 114 aa17.48■□□□□ 0.39
NME3-203ENST00000563367 CHCHD1Q96BP2 118 aaKnown RBP17.48■□□□□ 0.39
NME3-203ENST00000563367 TRGC2P03986 189 aa17.47■□□□□ 0.39
NME3-203ENST00000563367 PSORS1C2Q9UIG4 136 aa17.47■□□□□ 0.39
NME3-203ENST00000563367 H3BRM9 83 aa17.45■□□□□ 0.38
NME3-203ENST00000563367 ZNF22P17026 224 aaPredicted RBP17.45■□□□□ 0.38
NME3-203ENST00000563367 BAGE3Q86Y29 109 aa17.45■□□□□ 0.38
NME3-203ENST00000563367 KRTAP11-1Q8IUC1 163 aa17.45■□□□□ 0.38
NME3-203ENST00000563367 SRSF9Q13242 221 aaKnown RBP eCLIP17.44■□□□□ 0.38
NME3-203ENST00000563367 MT1HL1P0DM35 61 aa17.42■□□□□ 0.38
NME3-203ENST00000563367 C11orf86A6NJI1 115 aa17.41■□□□□ 0.38
NME3-203ENST00000563367 SPINK6Q6UWN8 80 aa17.41■□□□□ 0.38
NME3-203ENST00000563367 XAGE1AQ9HD64 81 aa17.41■□□□□ 0.38
NME3-203ENST00000563367 IGLV5-39A0A0G2JS06 123 aa17.4■□□□□ 0.38
NME3-203ENST00000563367 COLCA2A8K830 154 aa17.4■□□□□ 0.38
NME3-203ENST00000563367 M0QXV9 152 aa17.4■□□□□ 0.38
NME3-203ENST00000563367 IFI27L1Q96BM0 104 aa17.39■□□□□ 0.37
NME3-203ENST00000563367 C1orf137Q5JT78 98 aa17.38■□□□□ 0.37
NME3-203ENST00000563367 SERTAD4-AS1Q5TG53 156 aa17.38■□□□□ 0.37
NME3-203ENST00000563367 FAM19A2Q8N3H0 131 aa17.38■□□□□ 0.37
NME3-203ENST00000563367 CHTOPQ9Y3Y2 248 aaKnown RBP17.37■□□□□ 0.37
NME3-203ENST00000563367 HSBP1O75506 76 aa17.36■□□□□ 0.37
NME3-203ENST00000563367 LINC00310P59036 64 aa17.36■□□□□ 0.37
NME3-203ENST00000563367 TMEM170BQ5T4T1 132 aa17.34■□□□□ 0.37
NME3-203ENST00000563367 TRAV12-1A0A0B4J245 112 aa17.33■□□□□ 0.36
NME3-203ENST00000563367 TNXBP22105 4242 aa17.32■□□□□ 0.36
NME3-203ENST00000563367 SERF1AO75920 110 aa17.32■□□□□ 0.36
NME3-203ENST00000563367 UBE2BP63146 152 aa17.31■□□□□ 0.36
NME3-203ENST00000563367 LINC01600Q96MT4 127 aa17.31■□□□□ 0.36
NME3-203ENST00000563367 C22orf24Q9Y442 160 aa17.31■□□□□ 0.36
NME3-203ENST00000563367 NUPR1O60356 82 aa17.29■□□□□ 0.36
NME3-203ENST00000563367 SCO1O75880 301 aa17.29■□□□□ 0.36
NME3-203ENST00000563367 IGLV7-43P04211 117 aa17.29■□□□□ 0.36
NME3-203ENST00000563367 REG3GQ6UW15 175 aa17.28■□□□□ 0.36
NME3-203ENST00000563367 TMEM223A0PJW6 202 aa17.25■□□□□ 0.35
NME3-203ENST00000563367 PFN2P35080 140 aa17.25■□□□□ 0.35
NME3-203ENST00000563367 LEPROTL1O95214 131 aa17.23■□□□□ 0.35
NME3-203ENST00000563367 ZNF625Q96I27 306 aaPredicted RBP17.23■□□□□ 0.35
NME3-203ENST00000563367 TP73-AS1Q9UF72 201 aa17.23■□□□□ 0.35
NME3-203ENST00000563367 PLA2G2DQ9UNK4 145 aa17.23■□□□□ 0.35
NME3-203ENST00000563367 LBHQ53QV2 105 aaPredicted RBP17.22■□□□□ 0.35
NME3-203ENST00000563367 ERG28Q9UKR5 140 aa17.22■□□□□ 0.35
NME3-203ENST00000563367 H0Y8G0 127 aa17.21■□□□□ 0.35
NME3-203ENST00000563367 ODF1Q14990 250 aa17.21■□□□□ 0.35
NME3-203ENST00000563367 MRPL55Q7Z7F7 128 aaKnown RBP17.21■□□□□ 0.35
NME3-203ENST00000563367 KRTAP10-8P60410 259 aa17.18■□□□□ 0.34
NME3-203ENST00000563367 FABP4P15090 132 aa17.17■□□□□ 0.34
NME3-203ENST00000563367 COX17Q14061 63 aa17.17■□□□□ 0.34
NME3-203ENST00000563367 DIRC1Q969H9 104 aa17.17■□□□□ 0.34
NME3-203ENST00000563367 LINC00167Q96N53 147 aa17.17■□□□□ 0.34
NME3-203ENST00000563367 SND1-IT1Q9HBX3 110 aa17.17■□□□□ 0.34
NME3-203ENST00000563367 IGLV5-37A0A075B6J1 123 aa17.16■□□□□ 0.34
NME3-203ENST00000563367 SFTA2Q6UW10 78 aa17.16■□□□□ 0.34
NME3-203ENST00000563367 HSPB8Q9UJY1 196 aa17.15■□□□□ 0.34
NME3-203ENST00000563367 RPL37AP8A6NKH3 93 aa17.14■□□□□ 0.33
NME3-203ENST00000563367 H0Y9J4 135 aa17.14■□□□□ 0.33
NME3-203ENST00000563367 GAGE10A6NGK3 116 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BKO60814 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BJP06899 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BOP23527 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BBP33778 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BDP58876 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BCP62807 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST2H2BEQ16778 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BHQ93079 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BNQ99877 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HIST1H2BMQ99879 126 aa17.13■□□□□ 0.33
NME3-203ENST00000563367 HMCN2Q8NDA2 5059 aa17.12■□□□□ 0.33
NME3-203ENST00000563367 NKAPP1Q8N9T2 125 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms