RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TRBV30A0A0K0K1B3 111 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 CTXND1A0A1B0GTU2 59 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 MGPP08493 103 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 S100A3P33764 101 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 TJP1Q07157 1748 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 KRTAP26-1Q6PEX3 210 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 FDCSPQ8NFU4 85 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 COX7B2Q8TF08 81 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 UBL5Q9BZL1 73 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 NRXN2Q9P2S2 1712 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 V9GYV3 84 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 SHPRHQ149N8 1683 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 FAM208AQ9UK61 1670 aaKnown RBP1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 NFAT5O94916 1531 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 AGLP35573 1532 aa1.19□□□□□ -2.22
SHCBP1-202ENST00000563219 LRRC37A3O60309 1634 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 UBR3Q6ZT12 1888 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 PKD1L3Q7Z443 1732 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 TIAM2Q8IVF5 1701 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 FMN2Q9NZ56 1722 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 DIDO1Q9BTC0 2240 aaKnown RBP1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 IGKV3-7A0A075B6H7 116 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 A0A087WVE0 104 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 TRBV7-4A0A0J9YYF1 115 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 UQCR11O14957 56 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 PPYP01298 95 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 CCL3L1P16619 93 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 SERF2P84101 59 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 GDF5OSQ5U4N7 250 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 Q6ZSA8 131 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 WFDC6Q9BQY6 131 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 WFDC10AQ9H1F0 79 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 C3P01024 1663 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 SNRNP200O75643 2136 aaKnown RBP1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 MRC1P22897 1456 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 CD163L1Q9NR16 1453 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 RICTORQ6R327 1708 aa1.18□□□□□ -2.22
SHCBP1-202ENST00000563219 TNRC6BQ9UPQ9 1833 aaKnown RBP1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 DOCK11Q5JSL3 2073 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 COL14A1Q05707 1796 aaKnown RBP1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 IGKV2-40A0A087WW87 121 aaPredicted RBP1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 CLPSL1A2RUU4 121 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 C10orf142B7Z368 130 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 JMJD7-PLA2G4BH0Y9G9 81 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 M0R135 149 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 IGKV2D-40P01614 121 aaPredicted RBP1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 IFI6P09912 130 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 LYNX1P0DP58 116 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 NREPQ16612 68 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 WFDC9Q8NEX5 89 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 ALKQ9UM73 1620 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 ERCC6L2Q5T890 1561 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 MROH2BQ7Z745 1585 aa1.17□□□□□ -2.22
SHCBP1-202ENST00000563219 SCN7AQ01118 1682 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 LRP6O75581 1613 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 NHSL1Q5SYE7 1610 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 NRXN3Q9Y4C0 1643 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 PARP4Q9UKK3 1724 aaKnown RBP1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 TRAV1-2A0A0B4J238 106 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 TRBV6-4A0A1B0GX49 114 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 H0Y9P7 68 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 PRB1P04280 392 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 HMGA1P17096 107 aaKnown RBP1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 PDE6GP18545 87 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 PLNP26678 52 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 CCL18P55774 89 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 CAV3P56539 151 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 SNRPGP62308 76 aaKnown RBP1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 COX17Q14061 63 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 UNQ6190/PRO20217Q6UXQ8 127 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 PATE1Q8WXA2 126 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 LINC00208Q96KT6 92 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 LINC00846Q9NV44 126 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 ANKRD36A6QL64 1941 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 C5P01031 1676 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 RREB1Q92766 1687 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 MUC6Q6W4X9 2439 aa1.16□□□□□ -2.22
SHCBP1-202ENST00000563219 ATP7AQ04656 1500 aa1.15□□□□□ -2.22
SHCBP1-202ENST00000563219 CLTCL1P53675 1640 aa1.15□□□□□ -2.22
SHCBP1-202ENST00000563219 TRAV21A0A0B4J279 112 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 SMIM27A0A1W2PRY6 76 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 C10orf113Q5VZT2 155 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 ENHOQ6UWT2 76 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 DEFB119Q8N690 84 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 TMEM263Q8WUH6 116 aaKnown RBP1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 OBSCN-AS1Q96MR7 158 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 TMEM14CQ9P0S9 112 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 TIMM8BQ9Y5J9 83 aaPredicted RBP1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 ABCC8Q09428 1581 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 BCORQ6W2J9 1755 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 PAPPA2Q9BXP8 1791 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 FCGBPQ9Y6R7 5405 aaPredicted RBP1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 QSER1Q2KHR3 1735 aa1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 PHRF1Q9P1Y6 1649 aaKnown RBP1.15□□□□□ -2.23
SHCBP1-202ENST00000563219 TRBV6-1A0A0K0K1D8 114 aa1.14□□□□□ -2.23
SHCBP1-202ENST00000563219 IGLV3-1P01715 115 aa1.14□□□□□ -2.23
SHCBP1-202ENST00000563219 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
SHCBP1-202ENST00000563219 GAFA1Q96PS6 74 aa1.14□□□□□ -2.23
SHCBP1-202ENST00000563219 DDX60LQ5H9U9 1706 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms