RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	COX19	Q49B96	90 aa		13.39	□□□□□ -0.27
PPP4C-205	ENST00000563200	GAGE2E	Q4V326	116 aa		13.39	□□□□□ -0.27
PPP4C-205	ENST00000563200	KRTAP7-1	Q8IUC3	87 aa		13.39	□□□□□ -0.27
PPP4C-205	ENST00000563200	GAGE2D	Q9UEU5	116 aa		13.39	□□□□□ -0.27
PPP4C-205	ENST00000563200	CDKN2A-AS1	Q9UH64	79 aa		13.39	□□□□□ -0.27
PPP4C-205	ENST00000563200	NDUFC2-KCTD14	E9PQ53	114 aa		13.37	□□□□□ -0.27
PPP4C-205	ENST00000563200	SEC11A	P67812	179 aa		13.37	□□□□□ -0.27
PPP4C-205	ENST00000563200		Q8IZM0	81 aa		13.37	□□□□□ -0.27
PPP4C-205	ENST00000563200	MT-ND6	P03923	174 aa		13.36	□□□□□ -0.27
PPP4C-205	ENST00000563200	REG3G	Q6UW15	175 aa		13.36	□□□□□ -0.27
PPP4C-205	ENST00000563200	PACRG	Q96M98	296 aa	Predicted RBP	13.36	□□□□□ -0.27
PPP4C-205	ENST00000563200	SCGB3A1	Q96QR1	104 aa		13.36	□□□□□ -0.27
PPP4C-205	ENST00000563200	KRTAP11-1	Q8IUC1	163 aa		13.35	□□□□□ -0.27
PPP4C-205	ENST00000563200	MRPL18	Q9H0U6	180 aa	Known RBP	13.35	□□□□□ -0.27
PPP4C-205	ENST00000563200	RPS10P5	Q9NQ39	176 aa		13.35	□□□□□ -0.27
PPP4C-205	ENST00000563200	KRTAP10-8	P60410	259 aa		13.34	□□□□□ -0.27
PPP4C-205	ENST00000563200	C9orf129	Q5T035	196 aa	Known RBP	13.34	□□□□□ -0.27
PPP4C-205	ENST00000563200	TOMM7	Q9P0U1	55 aa		13.34	□□□□□ -0.27
PPP4C-205	ENST00000563200	LINC01549	A6NIU2	74 aa		13.33	□□□□□ -0.28
PPP4C-205	ENST00000563200	PRSS2	P07478	247 aa		13.33	□□□□□ -0.28
PPP4C-205	ENST00000563200	C1orf137	Q5JT78	98 aa		13.33	□□□□□ -0.28
PPP4C-205	ENST00000563200	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.33	□□□□□ -0.28
PPP4C-205	ENST00000563200	GEMIN7	Q9H840	131 aa	Known RBP	13.33	□□□□□ -0.28
PPP4C-205	ENST00000563200	FABP9	Q0Z7S8	132 aa		13.32	□□□□□ -0.28
PPP4C-205	ENST00000563200	C6orf226	Q5I0X4	101 aa		13.32	□□□□□ -0.28
PPP4C-205	ENST00000563200	CBLN2	Q8IUK8	224 aa		13.32	□□□□□ -0.28
PPP4C-205	ENST00000563200	CKS1B	P61024	79 aa		13.31	□□□□□ -0.28
PPP4C-205	ENST00000563200	IGLV5-45	A0A087WSX0	123 aa		13.3	□□□□□ -0.28
PPP4C-205	ENST00000563200	TINCR	A0A1B0GVN0	87 aa		13.3	□□□□□ -0.28
PPP4C-205	ENST00000563200	COLCA2	A8K830	154 aa		13.3	□□□□□ -0.28
PPP4C-205	ENST00000563200	S100A12	P80511	92 aa		13.3	□□□□□ -0.28
PPP4C-205	ENST00000563200	CST9L	Q9H4G1	147 aa		13.3	□□□□□ -0.28
PPP4C-205	ENST00000563200	LRP2	P98164	4655 aa		13.3	□□□□□ -0.28
PPP4C-205	ENST00000563200	SMIM1	B2RUZ4	78 aa		13.29	□□□□□ -0.28
PPP4C-205	ENST00000563200	S100A6	P06703	90 aa		13.29	□□□□□ -0.28
PPP4C-205	ENST00000563200	FA2H	Q7L5A8	372 aa		13.29	□□□□□ -0.28
PPP4C-205	ENST00000563200	LINC00518	Q8N0U6	118 aa		13.29	□□□□□ -0.28
PPP4C-205	ENST00000563200	LINC00469	Q8N7U9	141 aa		13.29	□□□□□ -0.28
PPP4C-205	ENST00000563200		F8VRH5	84 aa		13.28	□□□□□ -0.28
PPP4C-205	ENST00000563200		M0QXV9	152 aa		13.28	□□□□□ -0.28
PPP4C-205	ENST00000563200	IGLV7-43	P04211	117 aa		13.28	□□□□□ -0.28
PPP4C-205	ENST00000563200	ODF1	Q14990	250 aa		13.28	□□□□□ -0.28
PPP4C-205	ENST00000563200	URB1-AS1	Q96HZ7	61 aa		13.27	□□□□□ -0.29
PPP4C-205	ENST00000563200		A0A096LNJ9	63 aa		13.26	□□□□□ -0.29
PPP4C-205	ENST00000563200	PMVK	Q15126	192 aa		13.26	□□□□□ -0.29
PPP4C-205	ENST00000563200	PDZD11	Q5EBL8	140 aa		13.26	□□□□□ -0.29
PPP4C-205	ENST00000563200	CXCL5	P42830	114 aa		13.25	□□□□□ -0.29
PPP4C-205	ENST00000563200	C18orf32	Q8TCD1	76 aa		13.24	□□□□□ -0.29
PPP4C-205	ENST00000563200	TRAPPC1	Q9Y5R8	145 aa		13.24	□□□□□ -0.29
PPP4C-205	ENST00000563200	SMIM6	P0DI80	62 aa		13.22	□□□□□ -0.29
PPP4C-205	ENST00000563200	COX7B2	Q8TF08	81 aa		13.22	□□□□□ -0.29
PPP4C-205	ENST00000563200	XAGE1A	Q9HD64	81 aa		13.22	□□□□□ -0.29
PPP4C-205	ENST00000563200	DIRC1	Q969H9	104 aa		13.22	□□□□□ -0.29
PPP4C-205	ENST00000563200	LINC00614	P0C842	121 aa		13.21	□□□□□ -0.3
PPP4C-205	ENST00000563200	AKR1D1	P51857	326 aa		13.21	□□□□□ -0.3
PPP4C-205	ENST00000563200	UBE2B	P63146	152 aa		13.21	□□□□□ -0.3
PPP4C-205	ENST00000563200	SPINK8	P0C7L1	97 aa		13.2	□□□□□ -0.3
PPP4C-205	ENST00000563200	C5orf52	A6NGY3	159 aa		13.19	□□□□□ -0.3
PPP4C-205	ENST00000563200		H0Y9J4	135 aa		13.19	□□□□□ -0.3
PPP4C-205	ENST00000563200	IGLC3	P0DOY3	106 aa		13.19	□□□□□ -0.3
PPP4C-205	ENST00000563200	C22orf24	Q9Y442	160 aa		13.19	□□□□□ -0.3
PPP4C-205	ENST00000563200	YPEL4	Q96NS1	127 aa		13.17	□□□□□ -0.3
PPP4C-205	ENST00000563200	HBD	P02042	147 aa		13.16	□□□□□ -0.3
PPP4C-205	ENST00000563200	PMCHL1	Q16048	86 aa		13.16	□□□□□ -0.3
PPP4C-205	ENST00000563200	IGLV5-39	A0A0G2JS06	123 aa		13.15	□□□□□ -0.3
PPP4C-205	ENST00000563200		H3BRM9	83 aa		13.15	□□□□□ -0.3
PPP4C-205	ENST00000563200	C12orf57	Q99622	126 aa		13.15	□□□□□ -0.3
PPP4C-205	ENST00000563200	TP73-AS1	Q9UF72	201 aa		13.14	□□□□□ -0.31
PPP4C-205	ENST00000563200	KRTAP1-4	P0C5Y4	121 aa		13.13	□□□□□ -0.31
PPP4C-205	ENST00000563200	ZNF22	P17026	224 aa	Predicted RBP	13.13	□□□□□ -0.31
PPP4C-205	ENST00000563200	LBH	Q53QV2	105 aa	Predicted RBP	13.13	□□□□□ -0.31
PPP4C-205	ENST00000563200	NDUFA6	P56556	154 aa		13.12	□□□□□ -0.31
PPP4C-205	ENST00000563200	SNRPE	P62304	92 aa	Known RBP	13.12	□□□□□ -0.31
PPP4C-205	ENST00000563200	MRPL55	Q7Z7F7	128 aa	Known RBP	13.12	□□□□□ -0.31
PPP4C-205	ENST00000563200	PRR26	Q8N8Z3	221 aa		13.11	□□□□□ -0.31
PPP4C-205	ENST00000563200	NUPR1	O60356	82 aa		13.1	□□□□□ -0.31
PPP4C-205	ENST00000563200	ZNF861P	O60384	105 aa		13.09	□□□□□ -0.31
PPP4C-205	ENST00000563200	ATP5L	O75964	103 aa		13.09	□□□□□ -0.31
PPP4C-205	ENST00000563200	BAGE3	Q86Y29	109 aa		13.08	□□□□□ -0.32
PPP4C-205	ENST00000563200	C11orf86	A6NJI1	115 aa		13.07	□□□□□ -0.32
PPP4C-205	ENST00000563200	S100A2	P29034	98 aa		13.07	□□□□□ -0.32
PPP4C-205	ENST00000563200	IGLV5-37	A0A075B6J1	123 aa		13.06	□□□□□ -0.32
PPP4C-205	ENST00000563200	LINC00167	Q96N53	147 aa		13.06	□□□□□ -0.32
PPP4C-205	ENST00000563200	IGLV1-50	A0A075B6I6	118 aa		13.05	□□□□□ -0.32
PPP4C-205	ENST00000563200	CHCHD1	Q96BP2	118 aa	Known RBP	13.05	□□□□□ -0.32
PPP4C-205	ENST00000563200	BCE1	O60756	84 aa		13.03	□□□□□ -0.32
PPP4C-205	ENST00000563200	LPA	P08519	4548 aa		13.02	□□□□□ -0.33
PPP4C-205	ENST00000563200	RPL37AP8	A6NKH3	93 aa		13.02	□□□□□ -0.33
PPP4C-205	ENST00000563200	PFN2	P35080	140 aa		13.02	□□□□□ -0.33
PPP4C-205	ENST00000563200	RNF213	Q63HN8	5207 aa		13.01	□□□□□ -0.33
PPP4C-205	ENST00000563200	TMEM170B	Q5T4T1	132 aa		13.01	□□□□□ -0.33
PPP4C-205	ENST00000563200	ERG28	Q9UKR5	140 aa		13.01	□□□□□ -0.33
PPP4C-205	ENST00000563200	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.01	□□□□□ -0.33
PPP4C-205	ENST00000563200	TRAV12-1	A0A0B4J245	112 aa		13	□□□□□ -0.33
PPP4C-205	ENST00000563200	GAGE10	A6NGK3	116 aa		13	□□□□□ -0.33
PPP4C-205	ENST00000563200	COX17	Q14061	63 aa		13	□□□□□ -0.33
PPP4C-205	ENST00000563200	ZNF625	Q96I27	306 aa	Predicted RBP	13	□□□□□ -0.33
PPP4C-205	ENST00000563200	SND1-IT1	Q9HBX3	110 aa		12.99	□□□□□ -0.33
PPP4C-205	ENST00000563200	RPL28	P46779	137 aa	Known RBP	12.98	□□□□□ -0.33
PPP4C-205	ENST00000563200	NKAPP1	Q8N9T2	125 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms