RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
MAP1LC3B-203ENST00000562778 TRBV30A0A0K0K1B3 111 aa11.58□□□□□ -0.56
MAP1LC3B-203ENST00000562778 TIMM17AQ99595 171 aa11.58□□□□□ -0.56
MAP1LC3B-203ENST00000562778 ALKBH7Q9BT30 221 aaPredicted RBP11.58□□□□□ -0.56
MAP1LC3B-203ENST00000562778 CDKN2A-AS1Q9UH64 79 aa11.58□□□□□ -0.56
MAP1LC3B-203ENST00000562778 C1orf137Q5JT78 98 aa11.57□□□□□ -0.56
MAP1LC3B-203ENST00000562778 PACRGQ96M98 296 aaPredicted RBP11.57□□□□□ -0.56
MAP1LC3B-203ENST00000562778 REG3GQ6UW15 175 aa11.56□□□□□ -0.56
MAP1LC3B-203ENST00000562778 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
MAP1LC3B-203ENST00000562778 NDUFC2-KCTD14E9PQ53 114 aa11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 PRSS2P07478 247 aa11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 G0S2P27469 103 aa11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 HERVK_113P63121 156 aa11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 ERASQ7Z444 233 aa11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 MRPL18Q9H0U6 180 aaKnown RBP11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 TMA7Q9Y2S6 64 aaKnown RBP11.55□□□□□ -0.56
MAP1LC3B-203ENST00000562778 CKS1BP61024 79 aa11.54□□□□□ -0.56
MAP1LC3B-203ENST00000562778 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
MAP1LC3B-203ENST00000562778 GEMIN7Q9H840 131 aaKnown RBP11.54□□□□□ -0.56
MAP1LC3B-203ENST00000562778 LINC01546A6NGU7 62 aa11.53□□□□□ -0.56
MAP1LC3B-203ENST00000562778 KRTAP10-8P60410 259 aa11.53□□□□□ -0.56
MAP1LC3B-203ENST00000562778 FABP9Q0Z7S8 132 aa11.53□□□□□ -0.56
MAP1LC3B-203ENST00000562778 Q8IZM0 81 aa11.53□□□□□ -0.56
MAP1LC3B-203ENST00000562778 M0QXV9 152 aa11.52□□□□□ -0.57
MAP1LC3B-203ENST00000562778 COX19Q49B96 90 aa11.52□□□□□ -0.57
MAP1LC3B-203ENST00000562778 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.57
MAP1LC3B-203ENST00000562778 SEC11AP67812 179 aa11.51□□□□□ -0.57
MAP1LC3B-203ENST00000562778 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
MAP1LC3B-203ENST00000562778 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
MAP1LC3B-203ENST00000562778 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
MAP1LC3B-203ENST00000562778 TRGC2P03986 189 aa11.49□□□□□ -0.57
MAP1LC3B-203ENST00000562778 RAB5BP61020 215 aa11.49□□□□□ -0.57
MAP1LC3B-203ENST00000562778 CST9LQ9H4G1 147 aa11.49□□□□□ -0.57
MAP1LC3B-203ENST00000562778 XAGE1AQ9HD64 81 aa11.49□□□□□ -0.57
MAP1LC3B-203ENST00000562778 TRAPPC1Q9Y5R8 145 aa11.49□□□□□ -0.57
MAP1LC3B-203ENST00000562778 TINCRA0A1B0GVN0 87 aa11.48□□□□□ -0.57
MAP1LC3B-203ENST00000562778 UBE2BP63146 152 aa11.48□□□□□ -0.57
MAP1LC3B-203ENST00000562778 LRP2P98164 4655 aa11.47□□□□□ -0.57
MAP1LC3B-203ENST00000562778 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.57
MAP1LC3B-203ENST00000562778 F8VRH5 84 aa11.46□□□□□ -0.57
MAP1LC3B-203ENST00000562778 SPINK8P0C7L1 97 aa11.46□□□□□ -0.57
MAP1LC3B-203ENST00000562778 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
MAP1LC3B-203ENST00000562778 A0A096LNJ9 63 aa11.45□□□□□ -0.58
MAP1LC3B-203ENST00000562778 PMVKQ15126 192 aa11.45□□□□□ -0.58
MAP1LC3B-203ENST00000562778 COX7B2Q8TF08 81 aa11.45□□□□□ -0.58
MAP1LC3B-203ENST00000562778 LINC01549A6NIU2 74 aa11.44□□□□□ -0.58
MAP1LC3B-203ENST00000562778 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
MAP1LC3B-203ENST00000562778 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
MAP1LC3B-203ENST00000562778 C18orf32Q8TCD1 76 aa11.43□□□□□ -0.58
MAP1LC3B-203ENST00000562778 DIRC1Q969H9 104 aa11.43□□□□□ -0.58
MAP1LC3B-203ENST00000562778 C22orf24Q9Y442 160 aa11.43□□□□□ -0.58
MAP1LC3B-203ENST00000562778 CXCL5P42830 114 aa11.42□□□□□ -0.58
MAP1LC3B-203ENST00000562778 H0Y9J4 135 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BKO60814 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BJP06899 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BOP23527 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BBP33778 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BDP58876 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BCP62807 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST2H2BEQ16778 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BHQ93079 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BNQ99877 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 HIST1H2BMQ99879 126 aa11.41□□□□□ -0.58
MAP1LC3B-203ENST00000562778 NDUFA6P56556 154 aa11.4□□□□□ -0.58
MAP1LC3B-203ENST00000562778 LINC00614P0C842 121 aa11.39□□□□□ -0.59
MAP1LC3B-203ENST00000562778 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
MAP1LC3B-203ENST00000562778 H3BRM9 83 aa11.36□□□□□ -0.59
MAP1LC3B-203ENST00000562778 HBDP02042 147 aa11.36□□□□□ -0.59
MAP1LC3B-203ENST00000562778 S100A6P06703 90 aa11.36□□□□□ -0.59
MAP1LC3B-203ENST00000562778 KRTAP1-4P0C5Y4 121 aa11.36□□□□□ -0.59
MAP1LC3B-203ENST00000562778 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
MAP1LC3B-203ENST00000562778 LBHQ53QV2 105 aaPredicted RBP11.35□□□□□ -0.59
MAP1LC3B-203ENST00000562778 MRPL55Q7Z7F7 128 aaKnown RBP11.35□□□□□ -0.59
MAP1LC3B-203ENST00000562778 IGLV5-39A0A0G2JS06 123 aa11.33□□□□□ -0.6
MAP1LC3B-203ENST00000562778 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
MAP1LC3B-203ENST00000562778 RPL37AP8A6NKH3 93 aa11.32□□□□□ -0.6
MAP1LC3B-203ENST00000562778 ZNF861PO60384 105 aa11.32□□□□□ -0.6
MAP1LC3B-203ENST00000562778 ATP5LO75964 103 aa11.32□□□□□ -0.6
MAP1LC3B-203ENST00000562778 COA6Q5JTJ3 125 aaKnown RBP11.32□□□□□ -0.6
MAP1LC3B-203ENST00000562778 LINC00167Q96N53 147 aa11.32□□□□□ -0.6
MAP1LC3B-203ENST00000562778 TP73-AS1Q9UF72 201 aa11.32□□□□□ -0.6
MAP1LC3B-203ENST00000562778 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
MAP1LC3B-203ENST00000562778 PFN2P35080 140 aa11.31□□□□□ -0.6
MAP1LC3B-203ENST00000562778 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
MAP1LC3B-203ENST00000562778 BAGE3Q86Y29 109 aa11.31□□□□□ -0.6
MAP1LC3B-203ENST00000562778 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
MAP1LC3B-203ENST00000562778 NUPR1O60356 82 aa11.3□□□□□ -0.6
MAP1LC3B-203ENST00000562778 LPAP08519 4548 aa11.3□□□□□ -0.6
MAP1LC3B-203ENST00000562778 RNF213Q63HN8 5207 aa11.3□□□□□ -0.6
MAP1LC3B-203ENST00000562778 IGLV1-50A0A075B6I6 118 aa11.28□□□□□ -0.6
MAP1LC3B-203ENST00000562778 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
MAP1LC3B-203ENST00000562778 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
MAP1LC3B-203ENST00000562778 IGLV5-37A0A075B6J1 123 aa11.26□□□□□ -0.61
MAP1LC3B-203ENST00000562778 BCE1O60756 84 aa11.26□□□□□ -0.61
MAP1LC3B-203ENST00000562778 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
MAP1LC3B-203ENST00000562778 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms