RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 KIAA1109Q2LD37 5005 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 TRBV7-4A0A0J9YYF1 115 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 LINC00959A0A1B0GUT2 108 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 C20orf202A1L168 122 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 KRTDAPP60985 99 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 GTF2H5Q6ZYL4 71 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 LINC01600Q96MT4 127 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 CGREF1Q99674 301 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 RYR3Q15413 4870 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 APC2O95996 2303 aa-0.12□□□□□ -2.43
CHD9-204ENST00000561869 POLA1P09884 1462 aaPredicted RBP-0.12□□□□□ -2.43
CHD9-204ENST00000561869 WNK1Q9H4A3 2382 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 hADV29S1A0JD25 119 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 CRYM-AS1A6NIL9 109 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 TRAPPC2P0DI81 140 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 TRAPPC2BP0DI82 140 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 SPRR1BP22528 89 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 S100PP25815 95 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 SNCAP37840 140 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 UBA52P62987 128 aaKnown RBP-0.13□□□□□ -2.43
CHD9-204ENST00000561869 C12orf57Q99622 126 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 PRO1933Q9H354 126 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 DNAJC13O75165 2243 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 NUP188Q5SRE5 1749 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 XRN1Q8IZH2 1706 aaKnown RBP-0.13□□□□□ -2.43
CHD9-204ENST00000561869 TENM2Q9NT68 2774 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 KIAA0556O60303 1618 aa-0.13□□□□□ -2.43
CHD9-204ENST00000561869 PRDM15P57071 1507 aaPredicted RBP-0.13□□□□□ -2.43
CHD9-204ENST00000561869 SETXQ7Z333 2677 aaKnown RBP-0.14□□□□□ -2.43
CHD9-204ENST00000561869 RIF1Q5UIP0 2472 aaKnown RBP-0.14□□□□□ -2.43
CHD9-204ENST00000561869 FXYD6-FXYD2A0A087WZ82 144 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 A0A1B0GWA3 101 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 K7EQZ3 153 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 SFTA2Q6UW10 78 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 LCN9Q8WX39 176 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 C14orf144Q96I85 54 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 A0A0G2JMZ2 1700 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 ABCA3Q99758 1704 aa-0.14□□□□□ -2.43
CHD9-204ENST00000561869 SETBP1Q9Y6X0 1596 aa-0.15□□□□□ -2.43
CHD9-204ENST00000561869 TSC2P49815 1807 aa-0.15□□□□□ -2.43
CHD9-204ENST00000561869 ABCA13Q86UQ4 5058 aa-0.15□□□□□ -2.43
CHD9-204ENST00000561869 ZANQ9Y493 2812 aa-0.15□□□□□ -2.43
CHD9-204ENST00000561869 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
CHD9-204ENST00000561869 SEC11AP67812 179 aa-0.15□□□□□ -2.43
CHD9-204ENST00000561869 PLEKHH2Q8IVE3 1493 aa-0.16□□□□□ -2.43
CHD9-204ENST00000561869 TRAV30A0A087WSZ9 112 aa-0.16□□□□□ -2.44
CHD9-204ENST00000561869 TMEM218A2RU14 115 aa-0.16□□□□□ -2.44
CHD9-204ENST00000561869 NDUFC1O43677 76 aa-0.16□□□□□ -2.44
CHD9-204ENST00000561869 TCEAL7Q9BRU2 100 aa-0.16□□□□□ -2.44
CHD9-204ENST00000561869 USH2AO75445 5202 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 TRBV25-1A0A075B6N4 114 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 H7BZZ5 65 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 PDCD11Q14690 1871 aaKnown RBP-0.17□□□□□ -2.44
CHD9-204ENST00000561869 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 FDCSPQ8NFU4 85 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 CACFD1Q9UGQ2 172 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 NLRP1Q9C000 1473 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 MLH3Q9UHC1 1453 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 ACANP16112 2415 aa-0.17□□□□□ -2.44
CHD9-204ENST00000561869 EDC4Q6P2E9 1401 aaKnown RBP-0.18□□□□□ -2.44
CHD9-204ENST00000561869 A0A087WVE0 104 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 GNGT2O14610 69 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 MPC2O95563 127 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 MT-ATP8P03928 68 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 TEX14Q8IWB6 1497 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 REV3LO60673 3130 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 HYDINQ4G0P3 5121 aa-0.18□□□□□ -2.44
CHD9-204ENST00000561869 ANKRD36BQ8N2N9 1353 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 PAPPA2Q9BXP8 1791 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 CNTLNQ9NXG0 1405 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 LRP1BQ9NZR2 4599 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 A0A0G2JND7 137 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 C7orf77A4D0Y5 90 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 ATP6V1G2-DDX39BF2Z307 99 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 SPINK4O60575 86 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 SPRR2BP35325 72 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 RBP2P50120 134 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 PMCHL1Q16048 86 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 ACBD7Q8N6N7 88 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 USMG5Q96IX5 58 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 TRGV9Q99603 122 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 FYCO1Q9BQS8 1478 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 SLIT1O75093 1534 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 FLNBO75369 2602 aaKnown RBP-0.19□□□□□ -2.44
CHD9-204ENST00000561869 HECTD1Q9ULT8 2610 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 CREBBPQ92793 2442 aa-0.19□□□□□ -2.44
CHD9-204ENST00000561869 TARBP1Q13395 1621 aaKnown RBP-0.2□□□□□ -2.44
CHD9-204ENST00000561869 SHPRHQ149N8 1683 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 SETD2Q9BYW2 2564 aaPredicted RBP-0.2□□□□□ -2.44
CHD9-204ENST00000561869 NKTRP30414 1462 aaKnown RBP-0.2□□□□□ -2.44
CHD9-204ENST00000561869 CCDC141Q6ZP82 1450 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 RAPGEF2Q9Y4G8 1499 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 A0A1B0GU69 56 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 ATOX1O00244 68 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 COX8AP10176 69 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 PSMG4Q5JS54 123 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 C6orf201Q7Z4U5 140 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 SERP2Q8N6R1 65 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 VAMP8Q9BV40 100 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 PKHD1P08F94 4074 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms