RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 IGHV1-24A0A0C4DH33 117 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 A0A1W2PNN7 141 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 IGSF23A1L1A6 192 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 A6NED7 52 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 B4DEV8 164 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 F6UZH7 168 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 CCL25O15444 150 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 ARMS2P0C7Q2 107 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 P0C880 135 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 TPT1P13693 172 aaKnown RBP1.85□□□□□ -2.11
HERC1-215ENST00000561436 RAB2AP61019 212 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 SERF2P84101 59 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 DIRC1Q969H9 104 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 HYLS1Q96M11 299 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 AQP10Q96PS8 301 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 CCDC32Q9BV29 185 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 LSM5Q9Y4Y9 91 aaKnown RBP1.85□□□□□ -2.11
HERC1-215ENST00000561436 PHLDA3Q9Y5J5 127 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 TRBV24-1A0A075B6N3 115 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 GVQW2A0A096LPI5 108 aaPredicted RBP1.84□□□□□ -2.11
HERC1-215ENST00000561436 A8MWP4 228 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 NCR2O95944 276 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 ZNF80P51504 273 aaPredicted RBP1.84□□□□□ -2.11
HERC1-215ENST00000561436 MP68P56378 58 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 LINC00299Q6ZSB3 139 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 PSMG3Q9BT73 122 aaPredicted RBP1.84□□□□□ -2.11
HERC1-215ENST00000561436 DERL1Q9BUN8 251 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 ZNF471Q9BX82 626 aaPredicted RBP1.84□□□□□ -2.11
HERC1-215ENST00000561436 TNFSF18Q9UNG2 199 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 ARL2-SNX15V9GYD0 113 aa1.84□□□□□ -2.11
HERC1-215ENST00000561436 IGHV1-58A0A0C4DH39 117 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 TMEM250H0YL14 139 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 LYRM1O43325 122 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 SH2D1AO60880 128 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 SMIM17P0DL12 118 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 FGF6P10767 208 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 ZNF25P17030 456 aaPredicted RBP1.83□□□□□ -2.12
HERC1-215ENST00000561436 GCHFRP30047 84 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 CDC34P49427 236 aaPredicted RBP1.83□□□□□ -2.12
HERC1-215ENST00000561436 COX6A2Q02221 97 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 KRTAP25-1Q3LHN0 102 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 FAM74A4Q5TZK3 123 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 HSPB11Q9Y547 144 aa1.83□□□□□ -2.12
HERC1-215ENST00000561436 LOC107984640A0A0U1RRK4 108 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 F2Z2F3 143 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 H3BVH4 76 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 M0QY20 66 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 M0R381 172 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 UBE2L6O14933 153 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 LTAP01374 205 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 MT-ND6P03923 174 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 ESDP10768 282 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 IL7P13232 177 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 RPL12P30050 165 aaKnown RBP1.82□□□□□ -2.12
HERC1-215ENST00000561436 SULT1A2P50226 295 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 RPS20P60866 119 aaKnown RBP1.82□□□□□ -2.12
HERC1-215ENST00000561436 MEF2BQ02080 365 aaPredicted RBP1.82□□□□□ -2.12
HERC1-215ENST00000561436 SMAGPQ0VAQ4 97 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 SPANXN1Q5VSR9 72 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 TEX261Q6UWH6 196 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 SMIM12Q96EX1 92 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 AP1S3Q96PC3 154 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 NIT2Q9NQR4 276 aa1.82□□□□□ -2.12
HERC1-215ENST00000561436 LRP2P98164 4655 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 PLA2G10O15496 165 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 APOMO95445 188 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 TRGC1P0CF51 173 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 ARL14EPLP0DKL9 152 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 CRIP1P50238 77 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 UBE2D1P51668 147 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 UBE2G1P62253 170 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 GNG5P63218 68 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 EIF5AP63241 154 aaKnown RBP1.81□□□□□ -2.12
HERC1-215ENST00000561436 COTL1Q14019 142 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 ZNF56Q15929 161 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 EIF5AL1Q6IS14 154 aaKnown RBP1.81□□□□□ -2.12
HERC1-215ENST00000561436 RASL11AQ6T310 242 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 Q86TA4 180 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 OR5A1Q8NGJ0 315 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 STOML3Q8TAV4 291 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 PPP1R1CQ8WVI7 109 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 LINC00526Q96FQ7 95 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 CARD19Q96LW7 228 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 BIN3Q9NQY0 253 aa1.81□□□□□ -2.12
HERC1-215ENST00000561436 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
HERC1-215ENST00000561436 A0A096LNI7 61 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 BORCS7-ASMTA0A0B4J1R7 106 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 CTXND1A0A1B0GTU2 59 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 C19orf71A6NCJ1 209 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 MPC2O95563 127 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 ATP6V0CP27449 155 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 SS18Q15532 418 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 TPRXLQ17RH7 258 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 C10orf91Q5T1B1 145 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 BTF3L4Q96K17 158 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 IMMP2LQ96T52 175 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
HERC1-215ENST00000561436 TNXBP22105 4242 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms