RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 GVQW2A0A096LPI5 108 aaPredicted RBP12.89□□□□□ -0.35
IRF9-215ENST00000561415 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
IRF9-215ENST00000561415 CXCL5P42830 114 aa12.88□□□□□ -0.35
IRF9-215ENST00000561415 HIGD2BQ4VC39 106 aa12.88□□□□□ -0.35
IRF9-215ENST00000561415 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
IRF9-215ENST00000561415 ZNF561-AS1K7EIQ3 104 aa12.86□□□□□ -0.35
IRF9-215ENST00000561415 CKS1BP61024 79 aa12.86□□□□□ -0.35
IRF9-215ENST00000561415 LINC00526Q96FQ7 95 aa12.86□□□□□ -0.35
IRF9-215ENST00000561415 LCE6AA0A183 80 aa12.86□□□□□ -0.35
IRF9-215ENST00000561415 C2orf82Q6UX34 121 aa12.86□□□□□ -0.35
IRF9-215ENST00000561415 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
IRF9-215ENST00000561415 HERV-K104P63124 156 aa12.85□□□□□ -0.35
IRF9-215ENST00000561415 C1orf134Q5TEV5 83 aa12.85□□□□□ -0.35
IRF9-215ENST00000561415 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
IRF9-215ENST00000561415 C2orf91Q6ZV80 131 aa12.85□□□□□ -0.35
IRF9-215ENST00000561415 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
IRF9-215ENST00000561415 LECT2O14960 151 aa12.84□□□□□ -0.35
IRF9-215ENST00000561415 WFDC2Q14508 124 aa12.84□□□□□ -0.35
IRF9-215ENST00000561415 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
IRF9-215ENST00000561415 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
IRF9-215ENST00000561415 F8WDY8 70 aa12.81□□□□□ -0.36
IRF9-215ENST00000561415 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
IRF9-215ENST00000561415 HIGD1BQ9P298 99 aa12.81□□□□□ -0.36
IRF9-215ENST00000561415 FRAS1Q86XX4 4008 aa12.81□□□□□ -0.36
IRF9-215ENST00000561415 UNQ6190/PRO20217Q6UXQ8 127 aa12.81□□□□□ -0.36
IRF9-215ENST00000561415 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
IRF9-215ENST00000561415 C10orf25Q5T742 122 aa12.8□□□□□ -0.36
IRF9-215ENST00000561415 C14orf177Q52M58 125 aa12.79□□□□□ -0.36
IRF9-215ENST00000561415 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
IRF9-215ENST00000561415 KMT2CQ8NEZ4 4911 aaKnown RBP12.78□□□□□ -0.36
IRF9-215ENST00000561415 DNAH17Q9UFH2 4485 aa12.78□□□□□ -0.36
IRF9-215ENST00000561415 TIMM17BO60830 172 aa12.78□□□□□ -0.36
IRF9-215ENST00000561415 MEIG1Q5JSS6 88 aa12.78□□□□□ -0.36
IRF9-215ENST00000561415 LITAFQ99732 161 aa12.78□□□□□ -0.36
IRF9-215ENST00000561415 Q6ZRU5 148 aa12.77□□□□□ -0.36
IRF9-215ENST00000561415 ERG28Q9UKR5 140 aa12.77□□□□□ -0.36
IRF9-215ENST00000561415 TRBV30A0A0K0K1B3 111 aa12.76□□□□□ -0.37
IRF9-215ENST00000561415 TMEM238C9JI98 176 aa12.76□□□□□ -0.37
IRF9-215ENST00000561415 SLPIP03973 132 aa12.76□□□□□ -0.37
IRF9-215ENST00000561415 SYCNQ0VAF6 134 aa12.76□□□□□ -0.37
IRF9-215ENST00000561415 CIRBPQ14011 172 aaKnown RBP12.76□□□□□ -0.37
IRF9-215ENST00000561415 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
IRF9-215ENST00000561415 SPANXB1Q9NS25 103 aaPredicted RBP12.76□□□□□ -0.37
IRF9-215ENST00000561415 A0A087WTM6 91 aa12.75□□□□□ -0.37
IRF9-215ENST00000561415 SMIM13P0DJ93 91 aa12.74□□□□□ -0.37
IRF9-215ENST00000561415 C9orf116Q5BN46 136 aaPredicted RBP12.74□□□□□ -0.37
IRF9-215ENST00000561415 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
IRF9-215ENST00000561415 CARD19Q96LW7 228 aa12.74□□□□□ -0.37
IRF9-215ENST00000561415 COX17Q14061 63 aa12.74□□□□□ -0.37
IRF9-215ENST00000561415 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
IRF9-215ENST00000561415 RTL8CO15255 209 aa12.73□□□□□ -0.37
IRF9-215ENST00000561415 PFN2P35080 140 aa12.73□□□□□ -0.37
IRF9-215ENST00000561415 CNBPP62633 177 aaKnown RBP12.73□□□□□ -0.37
IRF9-215ENST00000561415 Q8N814 137 aa12.72□□□□□ -0.37
IRF9-215ENST00000561415 SPANXDQ9BXN6 97 aa12.72□□□□□ -0.37
IRF9-215ENST00000561415 SPANXCQ9NY87 97 aa12.72□□□□□ -0.37
IRF9-215ENST00000561415 RYR2Q92736 4967 aa12.72□□□□□ -0.37
IRF9-215ENST00000561415 M0R143 59 aa12.71□□□□□ -0.37
IRF9-215ENST00000561415 LINC00158P58513 81 aa12.71□□□□□ -0.37
IRF9-215ENST00000561415 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.37
IRF9-215ENST00000561415 HIST1H4GQ99525 98 aa12.71□□□□□ -0.37
IRF9-215ENST00000561415 HSD52Q0P140 79 aa12.71□□□□□ -0.38
IRF9-215ENST00000561415 TAL2Q16559 108 aa12.71□□□□□ -0.38
IRF9-215ENST00000561415 RNF151Q2KHN1 245 aa12.71□□□□□ -0.38
IRF9-215ENST00000561415 Q6ZVH6 145 aa12.71□□□□□ -0.38
IRF9-215ENST00000561415 DAND5Q8N907 189 aa12.71□□□□□ -0.38
IRF9-215ENST00000561415 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
IRF9-215ENST00000561415 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
IRF9-215ENST00000561415 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.69□□□□□ -0.38
IRF9-215ENST00000561415 TNP2Q05952 138 aa12.69□□□□□ -0.38
IRF9-215ENST00000561415 FAT2Q9NYQ8 4349 aa12.68□□□□□ -0.38
IRF9-215ENST00000561415 HECTD4Q9Y4D8 3996 aa12.67□□□□□ -0.38
IRF9-215ENST00000561415 NDUFC2-KCTD14E9PQ53 114 aa12.66□□□□□ -0.38
IRF9-215ENST00000561415 PTTG1IPP53801 180 aa12.66□□□□□ -0.38
IRF9-215ENST00000561415 CEND1Q8N111 149 aa12.66□□□□□ -0.38
IRF9-215ENST00000561415 TLX1NBP0CAT3 122 aa12.65□□□□□ -0.38
IRF9-215ENST00000561415 IFITM1P13164 125 aa12.65□□□□□ -0.38
IRF9-215ENST00000561415 LINC00308Q8TCZ7 52 aa12.65□□□□□ -0.38
IRF9-215ENST00000561415 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
IRF9-215ENST00000561415 GCSHP23434 173 aa12.64□□□□□ -0.39
IRF9-215ENST00000561415 EREGO14944 169 aa12.64□□□□□ -0.39
IRF9-215ENST00000561415 EIF4EBP3O60516 100 aaPredicted RBP12.64□□□□□ -0.39
IRF9-215ENST00000561415 NPC2P61916 151 aa12.64□□□□□ -0.39
IRF9-215ENST00000561415 MUSTN1Q8IVN3 82 aa12.64□□□□□ -0.39
IRF9-215ENST00000561415 HINT1P49773 126 aaPredicted RBP12.63□□□□□ -0.39
IRF9-215ENST00000561415 BVES-AS1Q5T3Y7 98 aa12.63□□□□□ -0.39
IRF9-215ENST00000561415 SOSTDC1Q6X4U4 206 aa12.63□□□□□ -0.39
IRF9-215ENST00000561415 COPS9Q8WXC6 57 aa12.63□□□□□ -0.39
IRF9-215ENST00000561415 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
IRF9-215ENST00000561415 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
IRF9-215ENST00000561415 Q6ZRP5 223 aa12.62□□□□□ -0.39
IRF9-215ENST00000561415 C9orf163Q8N9P6 203 aa12.61□□□□□ -0.39
IRF9-215ENST00000561415 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
IRF9-215ENST00000561415 FXYD2P54710 66 aa12.61□□□□□ -0.39
IRF9-215ENST00000561415 LOC107984156A0A0G2JMH3 177 aa12.6□□□□□ -0.39
IRF9-215ENST00000561415 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
IRF9-215ENST00000561415 ARL17AQ8IVW1 177 aa12.6□□□□□ -0.39
IRF9-215ENST00000561415 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
IRF9-215ENST00000561415 RPL18AQ02543 176 aaKnown RBP12.59□□□□□ -0.39
IRF9-215ENST00000561415 GAGE2EQ4V326 116 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms