RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 LGALS3P17931 250 aaKnown RBP4.7□□□□□ -1.66
SPG11-224ENST00000561268 FOXI1Q12951 378 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 FHL2Q14192 279 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 TEN1Q86WV5 123 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 Q9H8V8 135 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 SPANXCQ9NY87 97 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 PRO1854Q9UHT4 67 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 PRO0255Q9UI72 69 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 ICOSQ9Y6W8 199 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
SPG11-224ENST00000561268 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
SPG11-224ENST00000561268 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
SPG11-224ENST00000561268 TSPAN13O95857 204 aa4.69□□□□□ -1.66
SPG11-224ENST00000561268 IFITM1P13164 125 aa4.69□□□□□ -1.66
SPG11-224ENST00000561268 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
SPG11-224ENST00000561268 TTTY13Q9BZ97 58 aa4.69□□□□□ -1.66
SPG11-224ENST00000561268 CSDC2Q9Y534 153 aaKnown RBP4.69□□□□□ -1.66
SPG11-224ENST00000561268 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
SPG11-224ENST00000561268 IGLV4-3A0A075B6K6 122 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 IGLV5-45A0A087WSX0 123 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 TRBV30A0A0K0K1B3 111 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 K7ERJ3 54 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 M0R2P5 195 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 APOMO95445 188 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 TIRAPP58753 221 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 WFDC2Q14508 124 aa4.68□□□□□ -1.66
SPG11-224ENST00000561268 IGHV1-58A0A0C4DH39 117 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 TRBV10-1A0A0K0K1A3 114 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 A0A1B0GV72 72 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 F5H697 171 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 K7EQD1 137 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 IGHV3-53P01767 116 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 CFC1BP0CG36 223 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 CFC1P0CG37 223 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 DNAH10OSP0CZ25 163 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 ZNF22P17026 224 aaPredicted RBP4.67□□□□□ -1.66
SPG11-224ENST00000561268 RPL13AP40429 203 aaKnown RBP4.67□□□□□ -1.66
SPG11-224ENST00000561268 ZNF56Q15929 161 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 MRPL23Q16540 153 aaKnown RBP4.67□□□□□ -1.66
SPG11-224ENST00000561268 ETDBQ3ZM63 59 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 TMEM170BQ5T4T1 132 aa4.67□□□□□ -1.66
SPG11-224ENST00000561268 FAM240AA0A1B0GVK7 77 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 C16orf90A8MZG2 172 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 H7C423 109 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 KRTAP10-2P60368 255 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 ATXN8Q156A1 80 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 LYPD5Q6UWN5 251 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 ERG28Q9UKR5 140 aa4.66□□□□□ -1.66
SPG11-224ENST00000561268 A0A087WWL8 130 aa4.65□□□□□ -1.67
SPG11-224ENST00000561268 H3BT86 120 aa4.65□□□□□ -1.67
SPG11-224ENST00000561268 COX6CP09669 75 aa4.65□□□□□ -1.67
SPG11-224ENST00000561268 RPL39P62891 51 aaKnown RBP4.65□□□□□ -1.67
SPG11-224ENST00000561268 Q6Q795 121 aa4.65□□□□□ -1.67
SPG11-224ENST00000561268 WFDC10BQ8IUB3 73 aa4.65□□□□□ -1.67
SPG11-224ENST00000561268 NAA38Q9BRA0 125 aaKnown RBP4.65□□□□□ -1.67
SPG11-224ENST00000561268 TNFRSF18Q9Y5U5 241 aa4.65□□□□□ -1.67
SPG11-224ENST00000561268 TRGV4A0A0C4DH28 118 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 TRBV6-4A0A1B0GX49 114 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 RS1O15537 224 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 TCL1BO95988 128 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 SCGB1C2P0DMR2 95 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 IGHV3-30-3P0DP02 117 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 GYPEP15421 78 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 TSPEAR-AS2P59090 65 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 HERVK_113P63121 156 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 MIAQ16674 131 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 SFTA2Q6UW10 78 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 SH2D6Q7Z4S9 175 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 LITAFQ99732 161 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
SPG11-224ENST00000561268 LOC107984156A0A0G2JMH3 177 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 IGLV5-39A0A0G2JS06 123 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 LOC100131303A0A0U1RQF7 123 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 NDUFA1O15239 70 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 SLC25A20O43772 301 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 HERV-K104P63124 156 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 CIRBPQ14011 172 aaKnown RBP4.63□□□□□ -1.67
SPG11-224ENST00000561268 LINC01556Q5JQF7 62 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 FAM74A4Q5TZK3 123 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 DAZ4Q86SG3 579 aaKnown RBP4.63□□□□□ -1.67
SPG11-224ENST00000561268 ARL17AQ8IVW1 177 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 CARD19Q96LW7 228 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 CHCHD7Q9BUK0 85 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 GTSF1LQ9H1H1 148 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 JPT2Q9H910 190 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 DAZ3Q9NR90 486 aaKnown RBP4.63□□□□□ -1.67
SPG11-224ENST00000561268 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
SPG11-224ENST00000561268 ACYP1P07311 99 aa4.62□□□□□ -1.67
SPG11-224ENST00000561268 PSMB2P49721 201 aa4.62□□□□□ -1.67
SPG11-224ENST00000561268 Q8N1X5 172 aa4.62□□□□□ -1.67
SPG11-224ENST00000561268 ANKRD29Q8N6D5 301 aa4.62□□□□□ -1.67
SPG11-224ENST00000561268 CDIP1Q9H305 208 aa4.62□□□□□ -1.67
SPG11-224ENST00000561268 A0A087WTM6 91 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 IGHV3-38A0A0C4DH36 116 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 A0A0J9YXV3 536 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms