RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CXCL5P42830 114 aa9.96□□□□□ -0.82
LMX1B-204ENST00000561065 SERTAD4-AS1Q5TG53 156 aa9.96□□□□□ -0.82
LMX1B-204ENST00000561065 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.82
LMX1B-204ENST00000561065 Q8IZM0 81 aa9.96□□□□□ -0.82
LMX1B-204ENST00000561065 A0A0J9YXV3 536 aa9.95□□□□□ -0.82
LMX1B-204ENST00000561065 KIAA0087Q14695 138 aa9.95□□□□□ -0.82
LMX1B-204ENST00000561065 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
LMX1B-204ENST00000561065 NDUFA6P56556 154 aa9.94□□□□□ -0.82
LMX1B-204ENST00000561065 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
LMX1B-204ENST00000561065 Q6ZRP5 223 aa9.94□□□□□ -0.82
LMX1B-204ENST00000561065 UBR4Q5T4S7 5183 aa9.93□□□□□ -0.82
LMX1B-204ENST00000561065 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
LMX1B-204ENST00000561065 CHCHD1Q96BP2 118 aaKnown RBP9.93□□□□□ -0.82
LMX1B-204ENST00000561065 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
LMX1B-204ENST00000561065 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
LMX1B-204ENST00000561065 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
LMX1B-204ENST00000561065 F8VRH5 84 aa9.91□□□□□ -0.82
LMX1B-204ENST00000561065 GAGE2EQ4V326 116 aa9.91□□□□□ -0.82
LMX1B-204ENST00000561065 GAGE2DQ9UEU5 116 aa9.91□□□□□ -0.82
LMX1B-204ENST00000561065 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
LMX1B-204ENST00000561065 C2orf82Q6UX34 121 aa9.9□□□□□ -0.82
LMX1B-204ENST00000561065 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
LMX1B-204ENST00000561065 IGLV5-45A0A087WSX0 123 aa9.89□□□□□ -0.83
LMX1B-204ENST00000561065 BAGE3Q86Y29 109 aa9.89□□□□□ -0.83
LMX1B-204ENST00000561065 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
LMX1B-204ENST00000561065 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
LMX1B-204ENST00000561065 YPEL4Q96NS1 127 aa9.89□□□□□ -0.83
LMX1B-204ENST00000561065 HSBP1O75506 76 aa9.87□□□□□ -0.83
LMX1B-204ENST00000561065 CBLN2Q8IUK8 224 aa9.87□□□□□ -0.83
LMX1B-204ENST00000561065 SMIM1B2RUZ4 78 aa9.86□□□□□ -0.83
LMX1B-204ENST00000561065 IGLC3P0DOY3 106 aa9.86□□□□□ -0.83
LMX1B-204ENST00000561065 ODF1Q14990 250 aa9.86□□□□□ -0.83
LMX1B-204ENST00000561065 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
LMX1B-204ENST00000561065 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
LMX1B-204ENST00000561065 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
LMX1B-204ENST00000561065 A0A096LNJ9 63 aa9.84□□□□□ -0.83
LMX1B-204ENST00000561065 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
LMX1B-204ENST00000561065 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
LMX1B-204ENST00000561065 REG3GQ6UW15 175 aa9.84□□□□□ -0.83
LMX1B-204ENST00000561065 LINC01600Q96MT4 127 aa9.84□□□□□ -0.83
LMX1B-204ENST00000561065 TRGC2P03986 189 aa9.83□□□□□ -0.84
LMX1B-204ENST00000561065 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
LMX1B-204ENST00000561065 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
LMX1B-204ENST00000561065 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
LMX1B-204ENST00000561065 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
LMX1B-204ENST00000561065 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
LMX1B-204ENST00000561065 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
LMX1B-204ENST00000561065 LRP2P98164 4655 aa9.82□□□□□ -0.84
LMX1B-204ENST00000561065 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
LMX1B-204ENST00000561065 FAM168BA1KXE4 195 aa9.82□□□□□ -0.84
LMX1B-204ENST00000561065 UBE2BP63146 152 aa9.82□□□□□ -0.84
LMX1B-204ENST00000561065 FAM19A5Q7Z5A7 132 aaPredicted RBP9.82□□□□□ -0.84
LMX1B-204ENST00000561065 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
LMX1B-204ENST00000561065 KRTAP11-1Q8IUC1 163 aa9.81□□□□□ -0.84
LMX1B-204ENST00000561065 M0QXV9 152 aa9.8□□□□□ -0.84
LMX1B-204ENST00000561065 C1orf137Q5JT78 98 aa9.8□□□□□ -0.84
LMX1B-204ENST00000561065 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
LMX1B-204ENST00000561065 IGLV5-39A0A0G2JS06 123 aa9.79□□□□□ -0.84
LMX1B-204ENST00000561065 ZNF22P17026 224 aaPredicted RBP9.79□□□□□ -0.84
LMX1B-204ENST00000561065 COX17Q14061 63 aa9.79□□□□□ -0.84
LMX1B-204ENST00000561065 HSPB8Q9UJY1 196 aa9.79□□□□□ -0.84
LMX1B-204ENST00000561065 LEPROTL1O95214 131 aa9.78□□□□□ -0.84
LMX1B-204ENST00000561065 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
LMX1B-204ENST00000561065 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
LMX1B-204ENST00000561065 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
LMX1B-204ENST00000561065 COLCA2A8K830 154 aa9.77□□□□□ -0.85
LMX1B-204ENST00000561065 XAGE1AQ9HD64 81 aa9.77□□□□□ -0.85
LMX1B-204ENST00000561065 TP73-AS1Q9UF72 201 aa9.77□□□□□ -0.85
LMX1B-204ENST00000561065 LINC00587B1AMM8 73 aa9.76□□□□□ -0.85
LMX1B-204ENST00000561065 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
LMX1B-204ENST00000561065 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
LMX1B-204ENST00000561065 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
LMX1B-204ENST00000561065 NUPR1O60356 82 aa9.74□□□□□ -0.85
LMX1B-204ENST00000561065 ATP6V1G1O75348 118 aa9.74□□□□□ -0.85
LMX1B-204ENST00000561065 SERF1AO75920 110 aa9.74□□□□□ -0.85
LMX1B-204ENST00000561065 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
LMX1B-204ENST00000561065 IGLV7-43P04211 117 aa9.73□□□□□ -0.85
LMX1B-204ENST00000561065 PFN2P35080 140 aa9.73□□□□□ -0.85
LMX1B-204ENST00000561065 RPL24P83731 157 aaKnown RBP9.73□□□□□ -0.85
LMX1B-204ENST00000561065 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
LMX1B-204ENST00000561065 PLNP26678 52 aa9.72□□□□□ -0.85
LMX1B-204ENST00000561065 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
LMX1B-204ENST00000561065 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
LMX1B-204ENST00000561065 TMEM223A0PJW6 202 aa9.7□□□□□ -0.86
LMX1B-204ENST00000561065 H0Y8G0 127 aa9.7□□□□□ -0.86
LMX1B-204ENST00000561065 HERV-K104P63124 156 aa9.7□□□□□ -0.86
LMX1B-204ENST00000561065 FABP4P15090 132 aa9.69□□□□□ -0.86
LMX1B-204ENST00000561065 LINC00158P58513 81 aa9.69□□□□□ -0.86
LMX1B-204ENST00000561065 HERVK_113P61574 105 aa9.69□□□□□ -0.86
LMX1B-204ENST00000561065 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
LMX1B-204ENST00000561065 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
LMX1B-204ENST00000561065 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
LMX1B-204ENST00000561065 DPM2O94777 84 aa9.67□□□□□ -0.86
LMX1B-204ENST00000561065 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
LMX1B-204ENST00000561065 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
LMX1B-204ENST00000561065 LPAP08519 4548 aa9.65□□□□□ -0.86
LMX1B-204ENST00000561065 H0Y9J4 135 aa9.65□□□□□ -0.86
LMX1B-204ENST00000561065 RPL28P46779 137 aaKnown RBP9.65□□□□□ -0.86
LMX1B-204ENST00000561065 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
LMX1B-204ENST00000561065 LINC00167Q96N53 147 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms